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Rat connectome

Central medial thalamic nucleus caudal part left

Abbreviation	CMca
Color
Superior regions	Central medial thalamic nucleus

Synonyms	Abbr.	Language
Central medial thalamic nucleus caudal part	CMca
Caudal part of central medial thalamic nucleus
Caudal portion of central medial thalamic nucleus		Eng

Output to

Name	Side	Abbr.	Weight
Substantia innominata	ipsi	SI	1.5
Hypothalamus	ipsi	HYPO	0.5
Thalamus	ipsi	T	0.5
Rhomboid thalamic nucleus	ipsi	Rh	2
Paraventricular thalamic nucleus ventral part	ipsi	PVV	2
Reuniens thalamic nucleus	ipsi	Re	2
Ventromedial thalamic nucleus	ipsi	VM	2
Reticular thalamic nucleus	ipsi	Rt	2
Anterior forceps of the lateral edge of the corpus callosum	ipsi	ccaf	-2
Basal nucleus	ipsi	Bnc	-0.5
Basolateral amygdaloid nucleus	ipsi	BL	4
Basomedial amygdaloid nucleus	ipsi	BM	3
Basomedial nucleus lateral part	ipsi	BML	4
Lateral amygdaloid nucleus	ipsi	LA	4
Central amygdaloid nucleus	ipsi	Ce	3
Central amygdaloid nucleus shell	ipsi	CeSh	4
Interstitial nucleus of the posterior limb of the anterior commissure	ipsi	IPAC	-0.5
Interstitial nucleus of the posterior limb of the anterior commissure caudolateral part	ipsi	IPACcl	3
Interstitial nucleus of the posterior limb of the anterior commissure medial part	ipsi	IPACM	4
Interstitial nucleus of the posterior limb of the anterior commissure rostral part	ipsi	IPACR	3
Anterior amygdaloid area	ipsi	AA	3
Cortical amygdaloid nucleus	ipsi	CAn	-0.5
Medial amygdaloid nucleus	ipsi	Me	-0.5
Claustrum	ipsi	Cl	2
Claustrum deep layers	ipsi	CldL	2
Caudal globus pallidus lateral part	ipsi	GPcL	3
Accumbens nucleus	ipsi	Ac	1.5
Accumbens nucleus core	ipsi	AcbC	-0.5
Accumbens nucleus rostrolateral part	ipsi	AcRL	3
Accumbens nucleus shell	ipsi	AcbSh	-0.5
Anterior accumbens	ipsi	AcbA	0.5
Rostral part of the dorsolateral accumbens	ipsi	AcbRDL	3
Anterior striatum	ipsi	AStri	0.5
Caudal striatum	ipsi	CPuc	1
Caudate putamen bordering globus pallidus	ipsi	CPugp	1
Dorsal striatum ventral part	ipsi	CPudV	3
Dorsal striatum ventromedial part	ipsi	CPudvm	3
Rostrocaudal part of the ventral caudate putamen	ipsi	CPuvrc	3
Ventrolateral striatum	ipsi	CPuvl	2
Ventromedial caudate putamen bordering globus pallidus	ipsi	CPuvmgp	3
Lateral striatum	ipsi	CPul	2
Fundus of the striatum rostrolateral part	ipsi	FSrl	1
Entorhinal cortex	ipsi	Ent	1
Lateral entorhinal cortex	ipsi	LEnt	1
Piriform cortex	ipsi	Pir	1
Postpiriform transition area	ipsi	TR	1
Cingulate cortex	ipsi	Cg	0
Anterior cingulate cortex	ipsi	ACC	3
Prelimbic cortex	ipsi	PrL	3
Medial precentral prelimbic cortex	ipsi	MPPrL	3
Infralimbic cortex	ipsi	IL	3
Insular cortex	ipsi	ICX	3
Agranular insular cortex dorsal part	ipsi	AID	-0.5
Agranular insular cortex dorsal part rostral subdivision	ipsi	AIDr	2
Lateral part of the dorsal agranular insular cortex layer 1	ipsi	AILDL1	3
Lateral part of the dorsal agranular insular cortex layer 2	ipsi	AILDL2	2
Lateral part of the dorsal agranular insular cortex layer 3	ipsi	AILDL3	3
Lateral part of the dorsal agranular insular cortex layer 4	ipsi	AILDL4	2
Lateral part of the dorsal agranular insular cortex layer 5	ipsi	AILDL5	2
Lateral part of the dorsal agranular insular cortex layer 6	ipsi	AILDL6	2
Agranular insular cortex layer 1	ipsi	AIL1	2
Agranular insular cortex posterior part	ipsi	AIP	-0.5
Agranular insular cortex posterior part caudal portion	ipsi	AIPc	2
Agranular insular cortex posterior part layer 1	ipsi	AIPL1	2
Agranular insular cortex posterior part layer 2	ipsi	AIPL2	2
Agranular insular cortex posterior part layer 3	ipsi	AIPL3	3
Agranular insular cortex posterior part layer 4	ipsi	AIPL4	2
Agranular insular cortex posterior part layer 5	ipsi	AIPL5	3
Agranular insular cortex posterior part layer 6	ipsi	AIPL6	3
Gustatory dysgranular insular cortex dorsal part layer 1	ipsi	DIgDL1	3
Gustatory dysgranular insular cortex dorsal part layer 2	ipsi	DIgDL2	2
Gustatory dysgranular insular cortex dorsal part layer 3	ipsi	DIgDL3	3
Gustatory dysgranular insular cortex dorsal part layer 4	ipsi	DIgDL4	2
Gustatory dysgranular insular cortex dorsal part layer 5	ipsi	DIgDL5	2
Gustatory dysgranular insular cortex dorsal part layer 6	ipsi	DIgDL6	2
Gustatory dysgranular insular cortex layer 5	ipsi	DIgL5	2
Gustatory dysgranular insular cortex layer 1	ipsi	DIgL1	2
Gustatory dysgranular insular cortex layer 3	ipsi	DIgL3	2
Gustatory dysgranular insular cortex rostral part	ipsi	DIgR	2
Visceral dysgranular insular cortex	ipsi	DIv	3
Visceral dysgranular insular cortex layer 1	ipsi	DIvL1	2
Visceral dysgranular insular cortex layer 3	ipsi	DIvL3	2
Visceral dysgranular insular cortex layer 5	ipsi	DIvL5	2
Granular insular cortex	ipsi	GI	-0.5
Perirhinal cortex	ipsi	A35	3
Perirhinal cortex inner layers	ipsi	PRhiL	3
Ectorhinal cortex	ipsi	A36	1
Anterior prefrontal cortex lateral	ipsi	APFCL	3
Anterior prefrontal cortex middle part	ipsi	APFCm	3
Lateral agranular prefrontal cortex	ipsi	AGl	3
Lateral agranular prefrontal cortex layer 1	ipsi	AGlL1	2
Lateral agranular prefrontal cortex layer 3	ipsi	AGlL3	2
Lateral agranular prefrontal cortex deep layers	ipsi	AGldL	3
Lateral agranular prefrontal cortex layer 5	ipsi	AGlL5	2
Medial prefrontal cortex	ipsi	mPFC	0.5
Medial agranular prefrontal cortex	ipsi	AGm	0.5
Primary somatosensory cortex	ipsi	S1	1
Primary somatosensory cortex dorsal part	ipsi	S1D	1.5
Primary somatosensory cortex layer 5	ipsi	S1L5	2
Primary somatosensory cortex layer 1	ipsi	S1L1	2
Primary somatosensory cortex layer 3	ipsi	S1L3	2
Secondary somatosensory cortex	ipsi	S2	1
Prefrontal cortex lateral two thirds	ipsi	PFCLtt	3
Dorsolateral orbital cortex	ipsi	DLO	-0.5
Dorsolateral orbital cortex lateral part layer 1	ipsi	DLaOLL1	3
Dorsolateral orbital cortex lateral part layer 2	ipsi	DLaOLL2	2
Dorsolateral orbital cortex lateral part layer 3	ipsi	DLaOLL3	3
Dorsolateral orbital cortex deep layers	ipsi	DLOdL	3
Lateral orbital cortex	ipsi	LO	3
Lateral orbital cortex lateral part layer 1	ipsi	LOLL1	3
Lateral orbital cortex lateral part layer 2	ipsi	LOLL2	2
Lateral orbital cortex lateral part layer 3	ipsi	LOLL3	3
Lateral orbital cortex deep layers	ipsi	LOLad	3
Ventrolateral orbital area deep layers	ipsi	VLOd	3
Olfactory tubercle	ipsi	TuO	2
Olfactory tubercle anterior part	ipsi	TuOA	0.5

Input from

Name	Side	Abbr.	Weight	Details
Parabrachial nucleus ventrolateral part	ipsi	PBveLa	2.5
Parasubthalamic nucleus	ipsi	PSTh	1

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong