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Rat connectome



Cingulate cortex area 1 left


Abbreviation
Cg1
Color       
Superior regionsAnterior cingulate cortex

SynonymsAbbr.Language
Cingulate cortex area 1Cg1Eng
Cingulate area 1  
Cingulate area 24 Eng

SubregionsSide
Cingulate cortex area 1 caudal partleft
Cingulate cortex area 1 dorsal partleft
Cingulate cortex area 1 layersleft
Cingulate cortex area 1 rostral partleft
Cingulate cortex area 1 posterior partleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG2
Superior colliculusipsiSC3
Ventral tegmental area A10ipsiVTA2
Ventral tegmental area A10 caudal partipsiVTAcp0.5
Ventral tegmental area rostral partipsiVTAR0.5
Ventrolateral tegmental areaipsiVLTg1
Laterodorsal tegmental nucleusipsiLDTg0
Dorsal motor nucleus of vagusipsi101
Dorsal raphe nucleus caudal partipsiDRC1
Dorsal raphe nucleus midrostrocaudal partipsiDRmrc1
Dorsal raphe nucleus rostral partipsiDRr1
Median raphe nucleusipsiMnR3
Diagonal band of BrocaipsiDBB1
Basal nucleus MeynertipsiB1
Arcuate nucleusipsiArc-0.5
Mediodorsal thalamic nucleusipsiMD3
Mediodorsal thalamic nucleus central partipsiMDC3
Mediodorsal thalamic nucleus lateral partipsiMDL3
Mediodorsal thalamic nucleus medial partipsiMDM3
Paraventricular thalamic nucleus anterior partipsiPVA2
Paraventricular thalamic nucleus posterior partipsiPVP1
Reuniens thalamic nucleusipsiRe3
Reuniens thalamic nucleus caudomedial divisionipsiRecm2
Reunienes thalamic nucleus rostromedial divisionipsiRerm2
Reuniens thalamic nucleus rostrolateral divisionipsiRerl2
Reticular thalamic nucleusipsiRt3
Reticular thalamic nucleus caudal partipsiRtc0
Reticular thalamic nucleus central partipsiRtCe1
Reticular thalamic nucleus dorsoventral partipsiRtDV1
Reticular thalamic nucleus rostral partipsiRtr3
Inner zone of the rostral part of the reticular thalamic nucleusipsiRtriz3
Middle region of the rostral part of the reticular thalamic nucleusipsiRtrmi1.5
Outer zone of the rostral part of the reticular thalamic nucleusipsiRtroz3
Ventral medial nucleus of the thalamusipsiVMT3
Caudal internal capsuleipsicaic-0.5
Ventral part of internal capsuleipsiicv-0.5
Corpus callosumipsicc-0.5
Amygdaloid complexipsiAC1.5
Basolateral amygdaloid nucleusipsiBL-1
Anterior part of the claustrumipsiACl3
Caudate putamenipsiCPu1.5
Dorsomedial striatumipsiCPudm3
Medial striatumipsiCPum1
Dorsolateral striatumipsiCPudl0
Rostral striatumipsiCPur3
Dorsomedial part of rostral striatumipsiCPurDM-0.5
Ventrolateral striatumipsiCPuvl0
Subthalamic nucleusipsiSTh2
Cingulate cortex area 1 caudal partipsiCg1c1
Cingulate cortex area 2 caudal partipsiCg2c1
Cingulumipsicg-0.5
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL1.5
Frontal cortex area 2ipsiFr21
Parietal association cortexipsiPtA1
Insular cortexipsiICX0.5
Agranular insular cortexipsiAI-0.5
Agranular insular cortex posterior partipsiAIP-0.5
Prefrontal cortexipsiPFC-0.5
Elbow flexion motor cortexipsiEFMCx1
Ankle dorsiflexion motor cortexipsiADFMCx1
Ankle plantar flexion motor cortexipsiAPFMCx1
Hip flexion motor cortexipsiHFMCx1
Medial prefrontal cortex ventral partipsimPFCV3
Medial agranular prefrontal cortexipsiAGm1
Primary somatosensory cortex barrel fieldipsiS1BF1
Primary somatosensory cortex forelimb regionipsiS1FL2
Posterior prefrontal cortexipsiPoPFC-0.5
Secondary visual cortex medial areaipsiV2M3
Orbital cortexipsiOrC3
Dorsolateral orbital cortexipsiDLO-0.5
Lateral orbital cortexipsiLO-0.5
Medial orbital cortexipsiMO-0.5
Ventral orbital cortexipsiVO-0.5
Ventrolateral orbital areaipsiVLO-0.5
Commissural systemsipsicos-0.5
Septal regionipsiSER1
Periaqueductal graycontraPAG1
Ventral tegmental area A10contraVTA0.5
Ventrolateral tegmental areacontraVLTg1
Laterodorsal tegmental nucleuscontraLDTg0
Dorsal motor nucleus of vaguscontra101
Dorsal raphe nucleus rostral partcontraDRr1
Median raphe nucleuscontraMnR2
Mediodorsal thalamic nucleus central partcontraMDC2
Mediodorsal thalamic nucleus lateral partcontraMDL1
Mediodorsal thalamic nucleus medial partcontraMDM2
Dorsomedial striatumcontraCPudm1
Dorsolateral striatumcontraCPudl0
Ventrolateral striatumcontraCPuvl0
Piriform cortexcontraPir-0.5
Cingulate cortex area 1contraCg1-0.5
Infralimbic cortexcontraIL1
Agranular insular cortexcontraAI-0.5
Agranular insular cortex posterior partcontraAIP-0.5
Primary somatosensory cortex barrel fieldcontraS1BF0
Primary somatosensory cortex forelimb regioncontraS1FL0
Orbital cortexcontraOrC1
Bulbospongiosus muscleipsiMuscbsp1
Bulbospongiosus musclecontraMuscbsp-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG4
Peduncularpontine nucleusipsiPPN1.5
Ventral tegmental area A10ipsiVTA3
Caudal linear nucleus of the rapheipsiCLi2
Laterodorsal tegmental nucleusipsiLDTg4
Rostrocaudal axis of the laterodorsal tegmental nucleusipsiLDTgRCa3
Pedunculopontine tegmental nucleusipsiPPTg2
PonsipsiP1.5
Locus coeruleusipsiLC3
Locus coeruleus caudal partipsiLCca4
Locus coeruleus dorsal partipsiLCD3
Locus coeruleus rostrocaudal partipsiLCcBrc3
Locus coeruleus ventral partipsiLCv1.5
Lateral parabrachial nucleusipsiLPB2
Dorsal raphe nucleusipsiDR3
Median raphe nucleusipsiMnR2
Pontine raphe nucleusipsiPnR2
Diagonal band of BrocaipsiDBB0.5
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Dorsal thalamusipsiDOR3
Anteromedial thalamic nucleusipsiAM-0.5
Interoanteromedial thalamic nucleusipsiIAM-0.5
Central medial thalamic nucleusipsiCM-0.5
Centrolateral thalamic nucleusipsiCL3
Centrolateral thalamic nucleus dorsal partipsiCLD3
Centrolateral thalamic nucleus ventral portionipsiCLV0
Paracentral thalamic nucleusipsiPC-0.5
Parafascicular thalamic nucleusipsiPF1
Mediodorsal thalamic nucleusipsiMD3
Intermediodorsal thalamic nucleusipsiIMD-0.5
Mediodorsal thalamic nucleus dorsal part of the lateral part of caudal partipsiMDCaLD-0.5
Mediodorsal thalamic nucleus central partipsiMDC2
Mediodorsal thalamic nucleus lateral part of the central segmentipsiMDCL-0.5
Mediodorsal thalamic nucleus lateral partipsiMDL3
Mediodorsal thalamic nucleus rostrocaudal axis of the lateral partipsiMDLrca-0.5
Mediodorsal thalamic nucleus dorsal part of the medial partipsiMDMD-0.5
Paratenial thalamic nucleusipsiPT-0.5
Paraventricular thalamic nucleusipsiPV-0.5
Lateral posterior thalamic nucleus laterorostral part lateral regionipsiLPLRL1
Lateral posterior thalamic nucleus mediorostral part lateral regionipsiLPMRl0.5
Laterodorsal thalamic nucleus ventrolateral part medial regionipsiLDVLm0.5
Ventral medial nucleus of the thalamusipsiVMT-0.5
Xiphoid thalamic nucleusipsiXi-0.5
Amygdaloid complexipsiAC1.5
Basolateral amygdaloid nucleusipsiBL-0.5
Accumbens nucleus shellipsiAcbSh0
Field CA1 of hippocampusipsiCA1-0.5
Field CA3 of hippocampusipsiCA3-0.5
Retrosplenial regionsipsiRS-1
Cerebral cortex layer 1ipsiCCL11
Cingulate cortex area 1 caudal partipsiCg1c0.5
Cingulate cortex area 1 layer 1ipsiCg1L1-2
Cingulate cortex area 1 layer 2ipsiCg1L2-2
Cingulate cortex area 1 layer 3ipsiCg1L3-2
Cingulate cortex area 1 layer 4ipsiCg1L4-2
Cingulate cortex area 1 layer 5ipsiCg1L5-2
Cingulate cortex area 2 caudal partipsiCg2c0.5
Prelimbic cortexipsiPrL-0.5
Prelimbic cortex dorsal partipsiPrLd1
Prelimbic cortex ventral partipsiPrLv1.5
Infralimbic cortexipsiIL2
Frontal cortex area 2ipsiFr20.5
Parietal association cortexipsiPtA2
Insular cortexipsiICX0.5
Prefrontal cortexipsiPFC-0.5
Anterior prefrontal cortexipsiAPFC-0.5
Posterior prefrontal cortexipsiPoPFC-0.5
Primary visual cortexipsiV1-1
Secondary visual cortex medial areaipsiV2M-1
Secondary visual cortex lateral areaipsiV2L-1
Dorsolateral orbital cortexipsiDLO-0.5
Lateral orbital cortexipsiLO-0.5
Medial orbital cortexipsiMO-0.5
Ventral orbital cortexipsiVO-0.5
Ventrolateral orbital areaipsiVLO-0.5
Central graycontraCG1.5
Ventral tegmental area A10contraVTA1
Laterodorsal tegmental nucleuscontraLDTg1.5
Rostrocaudal axis of the laterodorsal tegmental nucleuscontraLDTgRCa1
Locus coeruleuscontraLC-0.5
Locus coeruleus caudal partcontraLCca2
Locus coeruleus rostrocaudal partcontraLCcBrc1.5
Anteromedial thalamic nucleuscontraAM-0.5
Interoanteromedial thalamic nucleuscontraIAM-0.5
Central medial thalamic nucleuscontraCM-0.5
Centrolateral thalamic nucleuscontraCL-0.5
Paracentral thalamic nucleuscontraPC-0.5
Mediodorsal thalamic nucleuscontraMD-0.5
Intermediodorsal thalamic nucleuscontraIMD-0.5
Paratenial thalamic nucleuscontraPT-0.5
Paraventricular thalamic nucleuscontraPV-0.5
Ventral medial nucleus of the thalamuscontraVMT-0.5
Xiphoid thalamic nucleuscontraXi-0.5
Limbic regionscontraLR-0.5
Cingulate cortex area 1contraCg1-0.5
Infralimbic cortexcontraIL-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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