University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Pedunculopontine tegmental nucleus caudal part right


Abbreviation
PPTgC
Color       
Superior regionsPedunculopontine tegmental nucleus

SynonymsAbbr.Language
Caudal part of pedunculopontine tegmental nucleus  
Pedunculopontine tegmental nucleus caudal partPPTgCEng

SubregionsSide
Pedunculopontine tegmental nucleus midcaudal levelright

Output to

NameSideAbbr.WeightDetails
Substantia nigra A9ipsiSN-0.5
Substantia nigra compact partipsiSNC1.5
Substantia nigra reticular partipsiSNR1
Ventral tegmental area A10ipsiVTA-0.5
Locus coeruleusipsiLC1.5
Deep mesencephalic nucleusipsiDpMe2
Dorsal raphe nucleusipsiDR1.5
Basal forebrainipsiBAF1.5
Tuberomammillary nucleusipsiTuM1
Lateral hypothalamic areaipsiLH1.5
Suprachiasmatic nucleusipsiSCh2
Intralaminar nucleiipsiILN1.5
Zona incertaipsiZI1.5
Caudate putamenipsiCPu1
Frontal association cortexipsiFrA1
Septal regionipsiSER1

Input from

NameSideAbbr.WeightDetails
Substantia nigra A9contraSN-0.5
Lateral hypothalamic area anterior partcontraLHAa1
Transition zone of the lateral hypothalamic areacontraLHTZ1
Lateral hypothalamus posterior partcontraLHP1
Zona incerta rostromedial partcontraZIrm0.5
Central gray alpha partipsiCGA0
Substantia nigra A9ipsiSN-0.5
Substantia nigra compact partipsiSNC1
Substantia nigra reticular partipsiSNR1
Laterodorsal tegmental nucleusipsiLDTg1
Ventral tegmental nucleus central partipsiVTgC-0.5
Dorsal tegmental nucleusipsiDTg0
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Locus coeruleusipsiLC1.5
Deep mesencephalic nucleusipsiDpMe1.5
Dorsal raphe nucleusipsiDR1.5
Superior central raphe nucleus compact subnucleusipsiSCc0
Basal forebrainipsiBAF1
Medial preoptic areaipsiMPA3
Tuberomammillary nucleusipsiTuM1
Lateral hypothalamic areaipsiLH1.5
Lateral hypothalamic area anterior partipsiLHAa3
Transition zone of the lateral hypothalamic areaipsiLHTZ3
Lateral hypothalamus posterior partipsiLHP3
Intralaminar nucleiipsiILN0
Zona incertaipsiZI1.5
Zona incerta rostromedial partipsiZIrm3
Medial to rostromedial zona incertaipsiZIMtRM3
Adjacent and dorsomedial to the internal capsuleipsiicadm3
Bed nucleus of the stria terminalis lateral divisionipsiBSTL2
Caudate putamenipsiCPu0
Subthalamic nucleus middle partipsiSThm2
Subthalamic nucleus rostral partipsiSThr2
Region around the fornixipsiraf3
Frontal association cortexipsiFrA1.5
Septal regionipsiSER1
Near the wall of the third ventricleipsi3Vnw3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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