University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Subcoeruleus nucleus alpha part right


Abbreviation
SubCA
Color       
Superior regionsSubcoeruleus nucleus

SynonymsAbbr.Language
Subcoeruleus nucleus alpha partSubCAEng
Subnucleus coeruleus alpha Eng

SubregionsSide
Ventral subcoeruleus nucleus alpha partright
Dorsal subcoeruleus nucleus alpha partright

Output to

NameSideAbbr.WeightDetails
Medial preoptic areacontraMPA-0.5
Posterior region [Lateral division of the hypothalamus]contraPReg0
Ventral horn C1contraVHC1-0.5
Ventral horn C2contraVHC2-0.5
Ventral horn C3contraVHC3-0.5
Medial preoptic areaipsiMPA-0.5
Posterior region [Lateral division of the hypothalamus]ipsiPReg0
Retinal ganglion cellsipsiRETg-0.5
Basolateral amygdaloid nucleusipsiBL0.5
Basomedial amygdaloid nucleusipsiBM0.5
Dorsoventral spinal cordipsiDVHMES3
Cervical segmentsipsiCSeg-0.5
Ventral horn C1ipsiVHC1-0.5
Ventral horn C2ipsiVHC2-0.5
Ventral horn C3ipsiVHC3-0.5
Thoracal segment 5ipsiT5-0.5
Thoracal segment 6ipsiT6-0.5
Thoracal segment 7ipsiT7-0.5
Thoracal segment 8ipsiT8-0.5
Thoracal segment 9ipsiT9-0.5
Lumbar epaxial musclesipsiMuscLep-10
Musculus masseteripsiMuscMass1
Urinary bladderipsiOrgUrBLa3

Input from

NameSideAbbr.WeightDetails
Dorsolateral periaqueductal gray caudal partcontraPAGdlc0.5
Dorsolateral periaqueductal gray rostral partcontraPAGdlr1
Ventrolateral periaqueductal gray caudal partcontraPAGvlc0.5
Ventrolateral periaqueductal gray rostral partcontraPAGvlr0.5
Dorsomedial hypothalamic nucleuscontraDMHy0
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR-0.5
Lateral hypothalamic area dorsal partcontraLHd-0.5
Lateral hypothalamic area ventral partcontraLHAvp-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Periventricular zonecontraPVZ-0.5
Medial part of the caudal perifornical areacontraPeFCM-0.5
Lateral part of the caudal perifornical areacontraPeFCL-0.5
Dorsolateral periaqueductal gray caudal partipsiPAGdlc2
Dorsolateral periaqueductal gray rostral partipsiPAGdlr3
Ventrolateral periaqueductal grayipsiVLPAG2
Ventrolateral periaqueductal gray caudal partipsiPAGvlc1
Ventrolateral periaqueductal gray rostral partipsiPAGvlr1
Extended ventrolateral preoptic nucleusipsieVLPO0
Ventrolateral preoptic nucleus clusteripsiVLPOc0
Dorsomedial hypothalamic nucleusipsiDMHy0
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR1
Lateral hypothalamic area dorsal partipsiLHd1
Lateral hypothalamic area ventral partipsiLHAvp1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0.5
Periventricular zoneipsiPVZ0.5
Medial part of the caudal perifornical areaipsiPeFCM1
Lateral part of the caudal perifornical areaipsiPeFCL1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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