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Rat connectome



Dorsolateral periaqueductal gray caudal part right


Abbreviation
PAGdlc
Color       
Superior regionsDorsolateral periaqueductal gray

SynonymsAbbr.Language
Dorsolateral periaqueductal gray caudal partPAGdlcEng

Output to

NameSideAbbr.WeightDetails
Ventral nucleus of the lateral lemniscuscontraVLL0.5
Paralemniscal nucleuscontraPL0.5
Parabigeminal nucleuscontraPBG0.5
Periparabigeminal areacontraPPBGa1
Periaqueductal graycontraPAG2
Periaqueductal gray caudal partcontraPAGc1
Periaqueductal gray rostral partcontraPAGR0.5
External cortex of the inferior colliculuscontraECIC0
Nucleus of the brachium of the inferior colliculuscontraBIC0
Intermediate gray layer of the superior colliculuscontraInG0
Superior colliculus deep layerscontraSCd0
Superior colliculus medial partcontramSC1
Peduncularpontine nucleuscontraPPN0
Substantia nigra compact partcontraSNC0
Substantia nigra lateral partcontraSNL0.5
Substantia nigra reticular partcontraSNR0
Ventral tegmental area A10contraVTA0
Dorsal tegmental nucleus lateral partcontraDLTN0
Interposed cerebellar nucleicontraICN0.5
Lateral cerebellar nucleuscontraCERL0
Medial cerebellar nucleuscontraMed0
A5 noradrenaline cellscontraA51
A5 noradrenaline cells dorsal partcontraA5d1
A5 region medial to the lateral facial nerve and to the lateral superior olivecontraA5Lfn0.5
Barringtons nucleuscontraBar1
Locus coeruleuscontraLC1
Reticulotegmental nucleuscontraRETn0
Prepositus nucleuscontraPr0
Caudoventrolateral reticular nucleuscontraCVLR0.5
Paramedian reticular nucleuscontraPMn0.5
Rostroventrolateral reticular nucleuscontraRVL0.5
Mesencephalic reticular formationcontraMRF-2
Nucleus reticularis subcuneiformiscontraRScf0
Pontine reticular nucleus oral partcontraPnO0.5
Pontine reticular nucleus caudal partcontraPNC0
Pontine reticular nucleus caudal part alphacontraPnOca0
Cuneiforme nucleuscontraCnF3
Koelliker Fuse nucleuscontraKF0.5
Lateral parabrachial nucleuscontraLPB0
Parabrachial nucleus medialcontraPBnMe0
Gigantocellular reticular nucleuscontraGi0
Gigantocellular reticular nucleus alpha partcontraGiA1
Gigantocellular reticular nucleus ventral partcontraGiV0.5
Medullary reticular nucleus dorsal partcontraMdDd-2
Ventral medullary reticular formationcontraVMurF0
Parvicellular reticular nucleuscontraPCRt0.5
Subcoeruleus nucleus alpha partcontraSubCA0.5
Subcoeruleus nucleus dorsal partcontraSubCD0.5
Supragenual nucleuscontraSGe0
Ambiguus nucleuscontraAmb0.5
Spinal trigeminal nucleuscontraSp5nc0.5
Nucleus of the solitary tract commissural partcontraSolC0.5
Nucleus of the solitary tract lateral partcontraSolL0.5
Dorsal raphe nucleuscontraDR0
Superior central raphe nucleuscontraCS0
Raphe magnus nucleuscontraRMg0.5
Raphe obscurus nucleuscontraROb0.5
Cuneate nucleuscontraCu0
Paragigantocellular reticular nucleuscontraPGi0
Lateral paragigantocellular nucleuscontraLPGi0.5
Lateral paragigantocellular nucleus rostral partcontraLPGiR1
Dorsomedial hypothalamic nucleuscontraDMHy0.5
Lateral hypothalamic areacontraLH0
Anterior hypothalamic areacontraAHA0.5
Dorsal hypothalamic areacontraDA0
Posterior hypothalamic nucleuscontraPH0
Tuberal area lateral partcontraTAL0
Tuberal area medial partcontraTAm0
Ventromedial hypothalamic nucleuscontraVMH1
Arcuate nucleuscontraArc0
Periventricular hypothalamic nucleuscontraPe0
Premammillary nucleus dorsal partcontraPMD0.5
Perifornical nucleuscontraPeF0
Zona incertacontraZI0.5
Tuber cinereum areacontraTC0
Lateral habenular nucleuscontraLHb0
Anterior pretectal nucleuscontraAPT0.5
Ventral geniculate nucleuscontraVG0
Dorsal horn C1contraDHC10
Ventral horn C1contraVHC10
Dorsal horn C2contraDHC20
Ventral horn C2contraVHC20
Dorsal horn C3contraDHC30
Ventral horn C3contraVHC30
Dorsal horn C4contraDHC40
Ventral horn C4contraVHC40
Dorsal horn C5contraDHC50
Ventral horn C5contraVHC50
Dorsal horn C6contraDHC60
Ventral horn C6contraVHC60
Dorsal horn C7contraDHC70
Ventral horn C7contraVHC70
Dorsal horn C8contraDHC80
Ventral horn C8contraVHC80
Dorsal horn T1contraDHT10
Ventral horn T1contraVHT10
Dorsal horn T2contraDHT20
Ventral horn T2contraVHT20
Dorsal horn T3contraDHT30
Ventral horn T3contraVHT30
Dorsal horn T4contraDHT40
Ventral horn T4contraVHT40
Dorsal horn T5contraDHT50
Ventral horn T5contraVHT50
Dorsal horn T6contraDHT60
Ventral horn T6contraVHT60
Dorsal horn T7contraDHT70
Ventral horn T7contraVHT70
Dorsal horn T8contraDHT80
Ventral horn T8contraVHT80
Dorsal horn T9contraDHT90
Ventral horn T9contraVHT90
Dorsal horn T10contraDHT100
Ventral horn T10contraVHT100
Dorsal horn T11contraDHT110
Ventral horn T11contraVHT110
Dorsal horn T12contraDHT120
Ventral horn T12contraVHT120
Dorsal horn T13contraDHT130
Ventral horn T13contraVHT130
Dorsal horn L1contraDHL10
Ventral horn L1contraVHL10
Dorsal horn L2contraDHL20
Ventral horn L2contraVHL20
Dorsal horn L3contraDHL30
Ventral horn L3contraVHL30
Dorsal horn L4contraDHL40
Ventral horn L4contraVHL40
Dorsal horn L5contraDHL50
Ventral horn L5contraVHL50
Dorsal horn L6contraDHL60
Ventral horn L6contraVHL60
Dorsal horn S1contraDHS10
Ventral horn S1contraVHSa10
Dorsal horn S2contraDHS20
Ventral horn S2contraVHSa20
Dorsal horn S3contraDHS30
Ventral horn S3contraVHSa30
Dorsal horn S4contraDHS40
Ventral horn S4contraVHSa40
Dorsal horn Co1contraDHCo10
Ventral horn Co1contraVHCo10
Dorsal horn Co2contraDHCo20
Ventral horn Co2contraVHCo20
Dorsal horn Co3contraDHCo30
Ventral horn Co3contraVHCo30
Ventral nucleus of the lateral lemniscusipsiVLL0.5
Paralemniscal nucleusipsiPL0.5
Parabigeminal nucleusipsiPBG0.5
Periparabigeminal areaipsiPPBGa2
Periaqueductal grayipsiPAG0.5
Periaqueductal gray caudal partipsiPAGc2
Periaqueductal gray rostral partipsiPAGR2
Periventricular gray matteripsiPVG-3
Inferior colliculusipsiICOL-0.5
External cortex of the inferior colliculusipsiECIC1
Nucleus of the brachium of the inferior colliculusipsiBIC0.5
Intermediate gray layer of the superior colliculusipsiInG0
Superior colliculus deep layersipsiSCd0.5
Superior colliculus medial partipsimSC1
Peduncularpontine nucleusipsiPPN0
Substantia nigra compact partipsiSNC2
Substantia nigra lateral partipsiSNL2
Substantia nigra reticular partipsiSNR0.5
Ventral tegmental area A10ipsiVTA2
Retrorubral nucleusipsiRR2
Dorsal tegmental nucleus lateral partipsiDLTN0
Interposed cerebellar nucleiipsiICN0
Lateral cerebellar nucleusipsiCERL0
Medial cerebellar nucleusipsiMed0
A5 noradrenaline cellsipsiA53
A5 noradrenaline cells dorsal partipsiA5d3
A5 region medial to the lateral facial nerve and to the lateral superior oliveipsiA5Lfn2
Barringtons nucleusipsiBar3
Locus coeruleusipsiLC3
Reticulotegmental nucleusipsiRETn0
Prepositus nucleusipsiPr0
Caudoventrolateral reticular nucleusipsiCVLR2
Paramedian reticular nucleusipsiPMn2
Rostroventrolateral reticular nucleusipsiRVL2
Mesencephalic reticular formationipsiMRF-0.5
Nucleus reticularis subcuneiformisipsiRScf0.5
Pontine reticular nucleus oral partipsiPnO0.5
Pontine reticular nucleus caudal partipsiPNC0.5
Pontine reticular nucleus caudal part alphaipsiPnOca0.5
Cuneiforme nucleusipsiCnF4
Koelliker Fuse nucleusipsiKF2
Lateral parabrachial nucleusipsiLPB0
Parabrachial nucleus medialipsiPBnMe0
Gigantocellular reticular nucleusipsiGi0
Gigantocellular reticular nucleus alpha partipsiGiA3
Gigantocellular reticular nucleus ventral partipsiGiV2
Medullary reticular nucleus dorsal partipsiMdDd-2
Ventral medullary reticular formationipsiVMurF0.5
Parvicellular reticular nucleusipsiPCRt2
Subcoeruleus nucleus alpha partipsiSubCA2
Subcoeruleus nucleus dorsal partipsiSubCD2
Supragenual nucleusipsiSGe0
Ambiguus nucleusipsiAmb1
Spinal trigeminal nucleusipsiSp5nc0
Nucleus of the solitary tract commissural partipsiSolC1
Nucleus of the solitary tract lateral partipsiSolL1
Dorsal raphe nucleusipsiDR0.5
Superior central raphe nucleusipsiCS0
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Cuneate nucleusipsiCu0
Paragigantocellular reticular nucleusipsiPGi0
Lateral paragigantocellular nucleusipsiLPGi2
Lateral paragigantocellular nucleus rostral partipsiLPGiR3
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Basal nucleus MeynertipsiB1
Substantia innominataipsiSI1
Lateral preoptic areaipsiLPO1
Lateral preoptic area medial partipsiLPOm1
Medial preoptic areaipsiMPA1
Medial preoptic nucleus lateral partipsiMPOL1
Dorsomedial hypothalamic nucleusipsiDMHy0.5
Lateral hypothalamic areaipsiLH2
Anterior hypothalamic areaipsiAHA2
Anterior hypothalamic area central partipsiAHAC2
Dorsal hypothalamic areaipsiDA2
Posterior hypothalamic nucleusipsiPH2
Tuberal area lateral partipsiTAL0
Tuberal area medial partipsiTAm0.5
Ventromedial hypothalamic nucleusipsiVMH4
Periventricular zoneipsiPVZ-0.5
Arcuate nucleusipsiArc0
Paraventricular hypothalamic nucleusipsiPa-0.5
Periventricular hypothalamic nucleusipsiPe0
Premammillary nucleus dorsal partipsiPMD3
A8 dopamine cells retrorubral groupipsiRRF2
Perifornical nucleusipsiPeF0
Central medial thalamic nucleusipsiCM1
Centrolateral thalamic nucleusipsiCL2
Paracentral thalamic nucleusipsiPC1
Parafascicular thalamic nucleusipsiPF1
Rhomboid thalamic nucleusipsiRh1
Paraventricular thalamic nucleusipsiPV2
Reuniens thalamic nucleusipsiRe1
Zona incertaipsiZI3
Tuber cinereum areaipsiTC0.5
Lateral habenular nucleusipsiLHb0
Anterior pretectal nucleusipsiAPT0.5
Bed nucleus of the stria terminalis caudal partipsiBSTCa1
Bed nucleus of the stria terminalis lateral division posterior partipsiBSTLP1
Bed nucleus of the stria terminalis rostral partipsiBSTro0
Ventral geniculate nucleusipsiVG0
Dorsal horn C1ipsiDHC10
Ventral horn C1ipsiVHC10
Dorsal horn C2ipsiDHC20
Ventral horn C2ipsiVHC20
Dorsal horn C3ipsiDHC30
Ventral horn C3ipsiVHC30
Dorsal horn C4ipsiDHC40
Ventral horn C4ipsiVHC40
Dorsal horn C5ipsiDHC50
Ventral horn C5ipsiVHC50
Dorsal horn C6ipsiDHC60
Ventral horn C6ipsiVHC60
Dorsal horn C7ipsiDHC70
Ventral horn C7ipsiVHC70
Dorsal horn C8ipsiDHC80
Ventral horn C8ipsiVHC80
Dorsal horn T1ipsiDHT10
Ventral horn T1ipsiVHT10
Dorsal horn T2ipsiDHT20
Ventral horn T2ipsiVHT20
Dorsal horn T3ipsiDHT30
Ventral horn T3ipsiVHT30
Dorsal horn T4ipsiDHT40
Ventral horn T4ipsiVHT40
Dorsal horn T5ipsiDHT50
Ventral horn T5ipsiVHT50
Dorsal horn T6ipsiDHT60
Ventral horn T6ipsiVHT60
Dorsal horn T7ipsiDHT70
Ventral horn T7ipsiVHT70
Dorsal horn T8ipsiDHT80
Ventral horn T8ipsiVHT80
Dorsal horn T9ipsiDHT90
Ventral horn T9ipsiVHT90
Dorsal horn T10ipsiDHT100
Ventral horn T10ipsiVHT100
Dorsal horn T11ipsiDHT110
Ventral horn T11ipsiVHT110
Dorsal horn T12ipsiDHT120
Ventral horn T12ipsiVHT120
Dorsal horn T13ipsiDHT130
Ventral horn T13ipsiVHT130
Dorsal horn L1ipsiDHL10
Ventral horn L1ipsiVHL10
Dorsal horn L2ipsiDHL20
Ventral horn L2ipsiVHL20
Dorsal horn L3ipsiDHL30
Ventral horn L3ipsiVHL30
Dorsal horn L4ipsiDHL40
Ventral horn L4ipsiVHL40
Dorsal horn L5ipsiDHL50
Ventral horn L5ipsiVHL50
Dorsal horn L6ipsiDHL60
Ventral horn L6ipsiVHL60
Dorsal horn S1ipsiDHS10
Ventral horn S1ipsiVHSa10
Dorsal horn S2ipsiDHS20
Ventral horn S2ipsiVHSa20
Dorsal horn S3ipsiDHS30
Ventral horn S3ipsiVHSa30
Dorsal horn S4ipsiDHS40
Ventral horn S4ipsiVHSa40
Dorsal horn Co1ipsiDHCo10
Ventral horn Co1ipsiVHCo10
Dorsal horn Co2ipsiDHCo20
Ventral horn Co2ipsiVHCo20
Dorsal horn Co3ipsiDHCo30
Ventral horn Co3ipsiVHCo30

Input from

NameSideAbbr.WeightDetails
Dorsolateral periaqueductal gray rostral partcontraPAGdlr1
Dorsolateral periaqueductal gray rostral partipsiPAGdlr3
Anterior hypothalamic nucleusipsiAHn3
Perifornical nucleus medial partipsiPeFM3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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