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Rat connectome

Primary somatosensory cortex layer 6 right

Abbreviation	S1L6
Color
Superior regions	Primary somatosensory cortex infragranular layers

Synonyms	Abbr.	Language
Primary somatosensory cortex layer 6	S1L6

Subregions	Side
Primary somatosensory cortex layer 6a	right
Primary somatosensory cortex layer 6b	right

Output to

Name	Side	Abbr.	Weight
Ventro anterior thalamic nucleus	contra	VA	0.5
Medial striatum	contra	CPum	1
Lateral striatum	contra	CPul	1
Frontal association cortex	contra	FrA	1
Frontal cortex area 3	contra	Fr3	1
Lateral parietal association cortex	contra	LPtA	1.5
Primary somatosensory cortex	contra	S1	3
Primary somatosensory cortex layer 5	contra	S1L5	-0.5
Primary somatosensory cortex layer 6	contra	S1L6	1
Primary somatosensory cortex forelimb region forepaw	contra	S1FP	3
Primary somatosensory cortex forelimb wrist region layer 5b	contra	S1FLWL5b	3
Primary somatosensory cortex periangular zone arround barrel fields	contra	S1pg	3
Secondary somatosensory cortex	contra	S2	3
Arcuate nucleus	ipsi	Arc	-0.5
Dorsal thalamus	ipsi	DOR	-0.5
Anterior group of the dorsal thalamus	ipsi	ATN	3
Parafascicular thalamic nucleus	ipsi	PF	3
Posterior thalamic nuclear group	ipsi	Po	-0.5
Posterior thalamic nuclear group dorsal part	ipsi	PoDo	3
Mediodorsal thalamic nucleus central part	ipsi	MDC	3
Mediodorsal thalamic nucleus lateral part	ipsi	MDL	1
Ventrolateral thalamic nucleus	ipsi	VL	3
Ventrobasal complex	ipsi	VB	3
External nucleus of ventrobasal complex	ipsi	EVB	-0.5
Dorsomedial zone of the ventral posterolateral thalamic nucleus	ipsi	VPLdmz	-0.5
Ventral posteromedial thalamic nucleus	ipsi	VPM	2
Ventral part of the ventral posteromedial thalamic nucleus	ipsi	VPMvL	-0.5
Ventrobasal complex posterior part	ipsi	VBp	3
Main thalamic relay nuclei	ipsi	VBMTRN	-0.5
Intralaminar nuclei	ipsi	ILN	-0.5
Lateral posterior thalamic nucleus	ipsi	LP	3
Reticular thalamic nucleus	ipsi	Rt	-0.5
Ventral medial nucleus of the thalamus	ipsi	VMT	-0.5
Zona incerta	ipsi	ZI	-0.5
Corpus callosum	ipsi	cc	-0.5
Caudate putamen	ipsi	CPu	2
Medial striatum	ipsi	CPum	1
Central striatum	ipsi	CPuce	2
Dorsal striatum	ipsi	CPud	2
Dorsolateral striatum	ipsi	CPudl	2
Striatal matrix compartment	ipsi	SMC	0
Striatal patch compartment	ipsi	SPC	0
Lateral striatum	ipsi	CPul	1
Frontal association cortex	ipsi	FrA	1
Frontal cortex area 3	ipsi	Fr3	1
Motoric regions	ipsi	M	-0.5
Forelimb motor cortex	ipsi	FMCx	2.5
Medial agranular prefrontal cortex	ipsi	AGm	3
Primary somatosensory cortex layer 1	ipsi	S1L1	0
Secondary somatosensory cortex	ipsi	S2	-0.5
Lateral geniculate complex	ipsi	LG	3
Medial geniculate nucleus	ipsi	MG	3

Input from

Name	Side	Abbr.	Weight
Frontal association cortex	contra	FrA	3
Frontal cortex area 2	contra	Fr2	3
Frontal cortex area 3	contra	Fr3	3
Lateral parietal association cortex	contra	LPtA	1.5
Whiskers motor cortex layer 5	contra	WMCxL5	3
Whiskers motor cortex layer 6	contra	WMCxL6	3
Primary somatosensory cortex	contra	S1	2
Primary somatosensory cortex layer 6	contra	S1L6	1
Gigantocellular reticular nucleus	ipsi	Gi	2
Central medial thalamic nucleus	ipsi	CM	-0.5
Centre median nucleus	ipsi	CeMe	1.5
Centrolateral thalamic nucleus	ipsi	CL	1
Paracentral thalamic nucleus	ipsi	PC	3
Parafascicular thalamic nucleus	ipsi	PF	1.5
Dorsal division of the lateral parafascicular thalamic nucleus	ipsi	PFDL	1
Parafascicular thalamic nucleus ventrolateral part	ipsi	PFvl	2
Rhomboid thalamic nucleus	ipsi	Rh	2
Ventrobasal complex	ipsi	VB	1
Ventral posteromedial thalamic nucleus	ipsi	VPM	3
Dorsomedial portion of the ventral posteromedial thalamic nucleus	ipsi	VPMdm	2
Ventral posterolateral thalamic nucleus parvicellular part	ipsi	VPLpc	-0.5
Intralaminar nuclei	ipsi	ILN	-0.5
Frontal association cortex	ipsi	FrA	3
Frontal cortex area 2	ipsi	Fr2	2
Frontal cortex area 3	ipsi	Fr3	3
Border of frontal cortex 2	ipsi	Fr2B	3
Dysgranular insular cortex	ipsi	DI	-0.5
Gustatory dysgranular insular cortex layer 5	ipsi	DIgL5	2
Gustatory dysgranular insular cortex layer 6	ipsi	DIgL6	2
Whiskers motor cortex layer 5	ipsi	WMCxL5	3
Whiskers motor cortex layer 6	ipsi	WMCxL6	3
Anterolateral area of subdivision 18a in lateral extrastriate cortex	ipsi	ALV2L	-0.5
Lateromedial area of subdivision 18a in lateral extrastriate cortex	ipsi	LMV2L	-0.5
Anterior portion of the anterolateral part of the lateral extrastriate cortex	ipsi	VISLaLA	3

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong