University of Rostock

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Rat connectome



Medial septal nucleus lateral part left


Abbreviation
MSLa
Color       
Superior regionsMedial septal nucleus

SynonymsAbbr.Language
Medial septal nucleus lateral partMSLaEng
Mediolateral septum  
Medial septum lateral part Eng
Lateral part of the medial septum Eng

SubregionsSide
Most lateral portion of the medial septal nucleusleft
Medial septal nucleus lateral borderleft
Medial septal nucleus lateral part at the border of the lateral septumleft
Medial septal nucleus lateral part multipolar cellsleft

Output to

NameSideAbbr.WeightDetails
Tenia tectaipsiTT1.5
Caudal levels of hippocampusipsiHIPc-0.5
Dorsal hippocampusipsiHIPPd-0.5
Hippocampal temporalipsiHIPPt-0.5
Dentate gyrus temporal partipsiDGT-0.5
Dorsal hippocampus dentate gyrusipsiDDG1
Ventral hippocampus dentate gyrusipsiVDG3
Hilus of the ventral hippocampus dentate gyrusipsiHVDG2
Ventral hippocampus dentate gyrus granule cell layeripsiVDGLg1
Ventral hippocampus dentate gyrus layer stratum moleculareipsiVDGL7sm1.5
Field CA1 of hippocampus dorsalipsiCA1d1
Field CA1 of hippocampus temporal partipsiCA1t-0.5
Field CA1 of hippocampus ventral partipsiCA1v3
Field CA1 of hippocampus ventral layer stratum oriensipsiCA1vL2so2.5
Field CA1 of hippocampus ventral layer stratum pyramidaleipsiCA1vL3sp1
Field CA1 of hippocampus ventral layer stratum radiatumipsiCA1vL5sr1.5
Field CA1 of hippocampus ventral layer stratum lacunosumipsiCA1vL6sla2
Field CA1 of hippocampus ventral layer stratum moleculareipsiCA1vL7sm2
Field CA2 of hippocampus dorsal partipsiCA2D1
Field CA2 of hippocampus ventral partipsiCA2V3
Field CA2 of hippocampus mid septotemporal portionipsiCA2mst1
Field CA3 of hippocampus dorsal partipsiCA3d1
Field CA3 of hippocampus dorsal layer stratum oriensipsiCA3dL2so0.5
Field CA3 of hippocampus dorsal layer stratum radiatumipsiCA3dL5sr0.5
Field CA3 of hippocampus mid septotemporal portionipsiCA3mst1
Field CA3 of hippocampus temporal partipsiCA3T-0.5
Field CA3 of hippocampus ventral partipsiCA3v3
Field CA3 of hippocampus ventral layer stratum oriensipsiCA3vL2so2.5
Field CA3 of hippocampus ventral layer stratum pyramidaleipsiCA3vL3sp1.5
Field CA3 of hippocampus ventral layer stratum radiatumipsiCA3vL5sr2.5
Field CA3 of hippocampus ventral layer stratum lacunosumipsiCA3vL6sla1.5
Field CA3 of hippocampus ventral layer stratum moleculareipsiCA3vL7sm1.5
Subiculum dorsal partipsiSd1
Subiculum ventral partipsiSv3
Ventral hippocampusipsiHIPPv-0.5
Ventrolateral hippocampusipsiVlHIPP-0.5
Presubiculum ventral partipsiPrSv2
ParasubiculumipsiPaS2.5
Dorsolateral entorhinal cortexipsiDLEnt2
Medial entorhinal cortexipsiMEnt2.5
Ventrolateral entorhinal cortexipsiVLENT2
Ventromedial entorhinal cortexipsiVMEA3
Retrosplenial agranular cortexipsiRSA1
Retrosplenial granular cortexipsiRSGra1
Ventral anterior cingulate cortexipsiVACC1
Prelimbic cortexipsiPrL1.5
Infralimbic cortexipsiIL1.5
Medial orbital cortexipsiMO1.5
Anterior olfactory nucleusipsiAON1

Input from

NameSideAbbr.WeightDetails
Dorsal raphe nucleusipsiDR1
Median raphe nucleusipsiMnR3
Median raphe nucleus medial partipsiMnRm-0.5
Lateral median raphe nucleusipsiLMnR-0.5
Caudal pole of medial preoptic areaipsiMPAc2
Supramammillar nucleusipsiSuM1
Supramammillar nucleus lateral two-thirdsipsiSuMLtt-0.5
Rostral supramammillar nucleus adjacent to the mammillothalamic tractipsiSuMRmtt-0.5
Supramammillar nucleus caudal poleipsiSuMcp-0.5
Supramammillar nucleus caudal part dorsal to the mammillothalamic tractipsiSuMCmtt-0.5
Medial habenular nucleus lateral partipsiMHbL-0.5
Medial habenular nucleus medial partipsiMHbm-0.5
Field CA3 of hippocampus temporal partipsiCA3T3
Subiculum ventral partipsiSv3
Infralimbic cortex deep layersipsiILDL3
Dorsal peduncular cortex deep layersipsiDPdL3
Interpeduncular nucleus dorsal subnucleusipsiIPRd-0.5
Interpeduncular nucleus ventral partipsiIPv-0.5
Lateral septal nucleusipsiLS1
Lateral septal nucleus caudal partipsiLSc-0.5
Lateral septal nucleus dorsal partipsiLSD1
Lateral septal nucleus intermediate partipsiLSI1
Lateral septal nucleus ventral partipsiLSV-0.5
Supramammillar nucleuscontraSuM0.5
Supramammillar nucleus lateral two-thirdscontraSuMLtt-0.5
Rostral supramammillar nucleus adjacent to the mammillothalamic tractcontraSuMRmtt-0.5
Supramammillar nucleus caudal polecontraSuMcp-0.5
Supramammillar nucleus caudal part dorsal to the mammillothalamic tractcontraSuMCmtt-0.5
Field CA3 of hippocampus temporal partcontraCA3T1
Lateral septal nucleuscontraLS0.5
Lateral septal nucleus dorsal partcontraLSD0.5
Lateral septal nucleus intermediate partcontraLSI0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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