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Rat connectome



Tenia tecta left


Abbreviation
TT
Color       
Superior regionsBasal forebrain

SynonymsAbbr.Language
Tenia tectum  
Taenia tecta  
Tenia tectaTTEng

SubregionsSide
Dorsal tenia tectaleft
Ventral tenia tectaleft
Tenia tecta layersleft

Output to

NameSideAbbr.WeightDetails
Rostromedial tegmental nucleusipsiRMTg1
Ventral tegmental area A10ipsiVTA1
Dorsal raphe nucleus caudal partipsiDRC0.5
Dorsal raphe nucleus central partipsiDRcep0.5
Dorsal raphe nucleus lateral wingipsiDRlw0.5
Dorsal raphe nucleus rostral partipsiDRr2
Median eminenceipsiME-0.5
Substantia innominataipsiSI3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM-0.5
Supraoptic nucleus [Supraoptic region]ipsiSO1
Mediodorsal thalamic nucleus medial partipsiMDM-0.5
Submedius thalamic nucleusipsiSub-0.5
Paraventricular thalamic nucleusipsiPV-0.5
Subparafascicular thalamic nucleus caudal partipsiSPFc1
Subparafascicular thalamic nucleus medial partipsiSPFme1
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Ventral medial nucleus of the thalamusipsiVMT-0.5
Lateral habenular nucleusipsiLHb1
Longitudinal association bundleipsilab-0.5
Amygdaloid complexipsiAC-0.5
Basolateral amygdaloid nucleusipsiBL-0.5
Basomedial amygdaloid nucleusipsiBM-0.5
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV-0.5
Central amygdaloid nucleusipsiCe2
Central amygdaloid nucleus lateral division medial partipsiCeLm-0.5
Central amygdaloid nucleus medial divisionipsiCeM-0.5
Central amygdaloid nucleus rostroventral partipsiCeRV-0.5
Central amygdaloid nucleus ventral partipsiCeV-0.5
Amygdalopiriform transition areaipsiAPir1
Anterior cortical amygdaloid nucleusipsiACo2
Lateral entorhinal cortexipsiLEnt2
Lateral entorhinal cortex ventral partipsiVLEA1
Lateral entorhinal cortex ventromedial partipsiVMEAL1
Medial entorhinal cortexipsiMEnt1.5
Piriform cortexipsiPir-0.5
Parietal cortex posterior areaipsiParP-1
Perirhinal cortexipsiA352.5
Ectorhinal cortexipsiA361.5
Postrhinal cortexipsiPOR0.5
Medial prefrontal cortexipsimPFC1
Anterior medial frontal cortexipsiAMFC-0.5
Orbital cortexipsiOrC1
Medial orbital cortexipsiMO-0.5
Ventrolateral orbital area posterior partipsiVLOp-0.5
Olfactory bulb A16ipsiMOB3
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Subparafascicular thalamic nucleus caudal partcontraSPFc0.5
Subparafascicular thalamic nucleus medial partcontraSPFme0.5
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG1
Central gray lateral partipsiCGL1
Diagonal band of BrocaipsiDBB2
Nucleus of the horizontal limb of the diagonal band medial partipsiHDBm3
Lateral intermediate part of the nucleus of the horizontal limb of the diagonal bandipsiLimHDB2
Nucleus of the vertical limb of the diagonal band caudal partipsiVDBc3
Nucleus of the vertical limb of the diagonal band rostromedial partipsiVDBrm2.5
Medial septal nucleus lateral partipsiMSLa1.5
Medial septal nucleus medial partipsiMSm2
Substantia innominataipsiSI2
Magnocellular preoptic nucleusipsiMCPO-0.5
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area perifornical partipsiPFx2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Posterior hypothalamic areaipsiPHA2
Supramammillar nucleusipsiSuM2
Central medial thalamic nucleus rostral partipsiCMr0
Rhomboid thalamic nucleusipsiRh2
Paratenial thalamic nucleusipsiPT1.5
Paraventricular thalamic nucleusipsiPV1
Paraventricular thalamic nucleus anterior partipsiPVA1
Paraventricular thalamic nucleus caudal partipsiPVca2
Paraventricular thalamic nucleus dorsal partipsiPVdo2
Paraventricular thalamic nucleus posterior partipsiPVP1.5
Paraventricular thalamic nucleus rostral partipsiPVr2
Paraventricular thalamic nucleus ventral partipsiPVV2
Subparafascicular thalamic nucleusipsiSPF2
Subparafascicular thalamic nucleus rostral partipsiSPFr2
Ventral medial nucleus of the thalamusipsiVMT-0.5
Amygdalopiriform transition areaipsiAPir-0.5
Anterior cortical amygdaloid nucleusipsiACo2
Posterior amygdaloid nucleusipsiCOAp2
Posterolateral cortical nucleusipsiPLCo-0.5
Nucleus of the lateral olfactory tractipsiLOT2
Periamygdaloid complexipsiPAC3
Medial amygdaloid nucleusipsiMe2
Medial amygdaloid nucleus anterodorsal partipsiMeAD2
Parasubthalamic nucleusipsiPSTh-2
Field CA1 of hippocampus temporal poleipsiCA1tp-0.5
Field CA1 of hippocampus splenial one-thirdipsiCA1ot-0.5
Field CA1 of hippocampus septal poleipsiCA1sp1
Lateral entorhinal cortexipsiLEnt-0.5
Anterior piriform cortexipsiAPIRC1.5
Central piriform cortexipsiCPC1.5
Posterior piriform cortexipsiPPIRC3
Cingulate cortex area 1 caudal partipsiCg1c0
Cingulate cortex area 2 caudal partipsiCg2c0
Prelimbic cortex dorsal partipsiPrLd0.5
Prelimbic cortex layer 2ipsiPrLL2-0.5
Prelimbic cortex layer 3ipsiPrLL3-0.5
Prelimbic cortex layer 5ipsiPrLL5-0.5
Prelimbic cortex ventral partipsiPrLv1
Infralimbic cortexipsiIL1
Infralimbic cortex caudal partipsiILCa-2
Infralimbic cortex layer 2ipsiILL2-0.5
Infralimbic cortex layer 5ipsiILL5-0.5
Infralimbic cortex layer 3ipsiILL3-0.5
Frontal cortex area 2ipsiFr20
Perirhinal cortexipsiA353
Dorsal peduncular cortexipsiDP-0.5
Medial orbital cortexipsiMO2
Medial orbital cortex deep layersipsiMOcxdL-1
Ventral orbital cortexipsiVO1
Olfactory bulb A16ipsiMOB-0.5
Ventral mitral cell layer of the olfactory bulbipsiMiV-0.5
Central graycontraCG0.5
Central gray lateral partcontraCGL0.5
Prepiriform cortexcontraPRPIR0
Perirhinal cortexcontraA351.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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