University of Rostock

Department of Anatomy

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Rat connectome



Infralimbic cortex deep layers left


Abbreviation
ILDL
Color       
Superior regionsInfralimbic cortex layers

SynonymsAbbr.Language
Infralimbic cortex deep layersILDL 
Infralimbic cortex deep layer  

SubregionsSide
Infralimbic cortex layer 5left
Infralimbic cortex layer 6left

Output to

NameSideAbbr.WeightDetails
Ventral tegmental area A10ipsiVTA2.5
Rostral medial pontine grayipsiRMePG3
Nucleus of the solitary tractipsiSol3
Dorsal motor nucleus of vagusipsi10-0.5
Dorsal raphe nucleus caudal partipsiDRC3
Dorsal raphe nucleus middle partipsiDRami3
Rostral ventrolateral medullaipsiRVLM1
Nucleus of the horizontal limb of the diagonal band medial partipsiHDBm3
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Medial septal nucleus lateral partipsiMSLa3
Medial part of the pars sublenticularis of the substantia innominataipsiSISM-0.5
Lateral preoptic areaipsiLPO3
Medial preoptic areaipsiMPA3
Ventral tuberomammillary nucleusipsiVTM2
Ventral tuberomammillary nucleus dorsal partipsiVTMd2
Ventral tuberomammillary nucleus rostral partipsiVTMr2
Ventral tuberomammillary nucleus ventral partipsiVTMv1
Lateral hypothalamic areaipsiLH3
Tuberal magnocellular nucleusipsiTUmag2
Ventral surface of the brain just lateral to the supraoptic nucleusipsiVSLSO-0.5
Dorsal hypothalamic areaipsiDA2
Posterior hypothalamic areaipsiPHA2
Medial mammillary nucleus medial partipsiMM2
Posterior mammillay nucleus caudal partipsiPMAMC1
Posterior mammillay nucleus lateral partipsiPMAML1
Supramammillar nucleusipsiSuM2
Gelatinosus thalamic nucleusipsiG2
Mediodorsal thalamic nucleusipsiMD2
Nucleus reuniens caudal divisionipsiREC2
Reuniens thalamic nucleus anterior partipsiReAn2
Anteromedial edge of the internal capsuleipsiamic-2
Ventromedial edge of the internal capsuleipsivmic-2
Inferior thalamic peduncleipsiitp-2
Ventral pallidum medial partipsiVPm3
Medial accumbensipsiAcbM3
Caudate putamenipsiCPu0
Anterior striatumipsiAStri-2
Cell bridges of the ventral striatumipsiCB3
Fundus of the striatumipsiFS3
Olfactory tubercleipsiTuO3
Anterior septal regionipsiASER-2
Lateral septal nucleus medial partipsiLSM3
Rostral medial pontine graycontraRMePG3
Dorsal motor nucleus of vaguscontra10-0.5
Rostral ventrolateral medullacontraRVLM0.5
Ventral tuberomammillary nucleuscontraVTM2

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG-0.5
Laterodorsal tegmental nucleusipsiLDTg-0.5
Locus coeruleusipsiLC-0.5
Nucleus of the solitary tractipsiSol3
Nucleus of the solitary tract medial partipsiSolM3
Substantia innominataipsiSI4
Magnocellular preoptic nucleusipsiMCPO4
Medial preoptic nucleusipsiMPO3
Median preoptic nucleusipsiMnPO-0.5
Ventral tuberomammillary nucleusipsiVTM-0.5
Lateral hypothalamic areaipsiLH3
Paraventricular hypothalamic nucleus ventral part [Periventricular zone anterior region]ipsiPaV-0.5
Central medial thalamic nucleus rostral partipsiCMr1.5
Subfornical organipsiSFO-0.5
Amygdalohippocampal areaipsiAHi-0.5
Ventral part of the temporal CA1 field of the hippocampus stratum pyramidaleipsiCA1tvpy-0.5
Subiculum ventral partipsiSv-0.5
Agranular insular cortex posterior part pressor siteipsiAIPp3
Middle part of the secondary somatosensory cortex layer 2ipsiS2miL21
Middle part of the secondary somatosensory cortex layer 3ipsiS2miL31
Middle part of the secondary somatosensory cortex layer 5ipsiS2miL51
Middle part of the secondary somatosensory cortex layer 2contraS2miL20.5
Middle part of the secondary somatosensory cortex layer 3contraS2miL30.5
Middle part of the secondary somatosensory cortex layer 5contraS2miL50.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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