University of Rostock

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Rat connectome



Lateral septal nucleus caudal part left


Abbreviation
LSc
Color       
Superior regionsLateral septal nucleus

SynonymsAbbr.Language
Lateral septal nucleus caudal partLScEng
Caudal lateral septal nucleus Eng

SubregionsSide
Lateral septal nucleus caudal halfleft
Lateral septal nucleus caudal part dorsal zoneleft
Lateral septal nucleus caudal part ventral zoneleft
Lateral septal nucleus most caudal aspectleft

Output to

NameSideAbbr.WeightDetails
Anteroposterior extension of the central gray mesencephalic partipsiCGMap1
Between anterior end of dorsal raphe and posterior ventral tegmental nucleus of the central gray mesencephalic partipsiCGMdrvtg1
Ventral tegmental area A10ipsiVTA1
Ventral tegmental area A10 middle thirdipsiVTAmit-0.5
Diagonal band of BrocaipsiDBB3
Nucleus of the diagonal band of Broca ventral partipsiVDBV3
Nucleus of the diagonal band ventrolateral tipipsiDBBvL3
Medial septal nucleusipsiMS3
Medial septal nucleus lateral partipsiMSLa-0.5
Substantia innominataipsiSI1
Lateral preoptic areaipsiLPO1
Lateral preoptic area caudal partipsiLPOc3
Medial preoptic areaipsiMPA1
Nucleus medianus of the medial preoptic areaipsiMPAme1
Dorsomedial hypothalamic nucleusipsiDMHy1
Lateral zoneipsiLHA1
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area perifornical partipsiPFx3
Lateral hypothalamic area rostromedial partipsiLHrm3
Lateral hypothalamic area ventral partipsiLHAvp3
Anterior hypothalamic areaipsiAHA-0.5
Nucleus circularisipsiNC1
Periventricular zoneipsiPVZ1
Arcuate nucleusipsiArc0.5
Paraventricular hypothalamic nucleusipsiPa1
Supramammillar nucleusipsiSuM1
Supramammillar nucleus lateral partipsiSuML3
Rostromedial region of the lateral part of the supramammillar nucleusipsiSuMLrm3
Rostral pole of the supramammillar nucleusipsiSuMRp1
Supramammillary decussationipsisumx3
Perifornical nucleusipsiPeF1
ThalamusipsiT-0.5
Median cell group in the rostral interoanteromedial thalamic nucleusipsiIAMmer-0.5
Central medial thalamic nucleus rostral tipipsiCMrt-0.5
Rhomboid thalamic nucleusipsiRh1
Paratenial thalamic nucleusipsiPT-0.5
Reuniens thalamic nucleusipsiRe-0.5
HabenulaipsiHAB-0.5
Medial forebrain bundleipsimfb-2
Bed nucleus of the stria terminalis posterior divisionipsiBSTP3
HippocampusipsiHIPP1
Fimbria fornix regionipsififo1
Interpeduncular nucleusipsiIP-0.5
Lateral septal nucleus medial partipsiLSM-2
Septofimbrial nucleusipsiSFi-0.5
Ventral tegmental area A10 middle thirdcontraVTAmit-0.5
Supramammillar nucleus lateral partcontraSuML3
Rostromedial region of the lateral part of the supramammillar nucleuscontraSuMLrm3
Paratenial thalamic nucleuscontraPT2

Input from

NameSideAbbr.WeightDetails
Red nucleusipsiR3
Ventral tegmental area A10ipsiVTA1
Laterodorsal tegmental nucleusipsiLDTg3
Locus coeruleusipsiLC1
Nucleus incertus pars compactaipsiNIc1
Nucleus incertus pars dissipataipsiNId0.5
Parabrachial nucleusipsiPB1
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus lateral wingipsiDRlw3
Superior central raphe nucleusipsiCS3
Diagonal band of BrocaipsiDBB3
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial septal nucleusipsiMS-0.5
Substantia innominataipsiSI3
Lateral preoptic areaipsiLPO3
HypothalamusipsiHYPO-0.5
Lateral zoneipsiLHA3
Lateral hypothalamic area perifornical partipsiPFx-0.5
Anterior hypothalamic nucleusipsiAHn3
Anterior hypothalamic nucleus ventral partipsiAHnv1
Supramammillar nucleus lateral partipsiSuML3
ThalamusipsiT-0.5
TelencephalonipsiTEL3
Amygdaloid complexipsiAC-0.5
Bed nucleus of the stria terminalisipsiBST3
Medial amygdaloid nucleusipsiMe-0.5
HippocampusipsiHIPP-0.5
Field CA1 of hippocampusipsiCA11
Field CA3 of hippocampusipsiCA33
Field CA3 of hippocampus dorsal partipsiCA3d3
SubiculumipsiS1
Interpeduncular nucleus rostral subnucleus midrostrocaudal partipsiIPRmrc4
Lateral septal nucleus rostral part dorsolateral zoneipsiLSrdl-0.5
Lateral septal nucleus ventral partipsiLSV1
Laterodorsal tegmental nucleuscontraLDTg3
Locus coeruleuscontraLC1
Field CA3 of hippocampuscontraCA33

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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