University of Rostock

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Rat connectome



Medial accumbens left


Abbreviation
AcbM
Color       
Superior regionsAccumbens nucleus

SynonymsAbbr.Language
Nucleus accumbens medial segment  
Medial accumbensAcbMEng
Medial portion of nucleus accumbens  
Medial part of accumbensNAmEng

SubregionsSide
Medial half of the nucleus accumbensleft
Oval shaped area in medial accumbensleft
Medial two-thirds of the accumbens nucleusleft
Medium-sized spiny projection neurons of the medial nucleus accumbensleft
Medial accumbens rostrocaudal extentleft

Output to

NameSideAbbr.WeightDetails
Ventral tegmental area A10ipsiVTA-0.5
Substantia innominataipsiSI-0.5
Substantia innominata medial partipsiSIme-0.5
Lateral preoptic area medial partipsiLPOm-0.5
Mediodorsal thalamic nucleusipsiMD-0.5
Paratenial thalamic nucleusipsiPT-0.5
Reticular thalamic nucleus medial partipsiRtm2
HabenulaipsiHAB3
Lateral habenular nucleusipsiLHb3
Medial habenular nucleusipsiMHb0
Medial habenular nucleus ventral partipsiMHbv1
Anteroventral globus pallidusipsiGPav-0.5
Medial globus pallidusipsiMGP-0.5
HippocampusipsiHIPP-0.5
Ammon hornipsiAmH-0.5
Subiculum dorsal partipsiSd-0.5
Presubiculum dorsal part deep layersipsiPrDLD-0.5
ParasubiculumipsiPaS-0.5
Entorhinal cortexipsiEnt-0.5
Lateral entorhinal cortex ventral part layer 2ipsiVLEAL21
Lateral entorhinal cortex ventral part layer 4ipsiVLEAL43
Medial entorhinal cortex layer 2ipsiMEntLyL21
Medial entorhinal cortex layer 4ipsiMEntLyL43
Ventral entorhinal cortex layersipsiEntVeL-0.5
Retrosplenial regionsipsiRS-0.5
HabenulacontraHAB1
Lateral habenular nucleuscontraLHb1
HippocampuscontraHIPP-0.5

Input from

NameSideAbbr.WeightDetails
Ventral tegmental area A10ipsiVTA2
Interfascicular nucleusipsiIF2
Ventral tegmental area A10 medial partipsiVTAM2
Parabrachial pigmented nucleus ventral partipsiPBPv-0.5
Paranigral nucleusipsiPN3
Medial part of the paranigral nucleusipsiMePN2
Paranigral nucleus lateral partipsiPNL2
Caudal linear nucleus of the rapheipsiCLi1
Dorsal raphe nucleus interfascicular partipsiDRI0.5
Rostral linear nucleus of the rapheipsiRLi2
Central raphe nucleusipsiCRN2
Nucleus of the vertical limb of the diagonal bandipsiVDB0.5
Lateral hypothalamic areaipsiLH0.5
Supramammillar nucleusipsiSuM-0.5
Interoanteromedial thalamic nucleusipsiIAM1
Central medial thalamic nucleusipsiCM1.5
Paracentral thalamic nucleusipsiPC1
Parafascicular thalamic nucleusipsiPF1
Rhomboid thalamic nucleusipsiRh1
Mediodorsal thalamic nucleusipsiMD0.5
Intermediodorsal thalamic nucleusipsiIMD3
Paratenial thalamic nucleusipsiPT3
Paraventricular thalamic nucleusipsiPV3
Paraventricular thalamic nucleus anterior partipsiPVA3
Paraventricular thalamic nucleus posterior partipsiPVP1
Reuniens thalamic nucleusipsiRe0.5
Basal nucleusipsiBnc-1
Accessory basal nucleusipsiAB-1
Basal nucleus magnocellular partipsiBmc2
Basal nucleus parvicellular partipsiBpc2
Basal nucleus parvicellular part caudomedial regionipsiBpccm-0.5
Basolateral amygdaloid nucleusipsiBL3
Anterior basolateral nucleusipsiBLA-0.5
Basolateral nucleus caudal partipsiBLCP2.5
Basolateral nucleus medial portionipsiBLmp3
Basolateral nucleus rostral partipsiBLRP0.5
Posterior basolateral nucleusipsiBLP-0.5
Basomedial amygdaloid nucleusipsiBM1
Lateral amygdaloid nucleusipsiLA2
Bed nucleus of the stria terminalisipsiBST-1
Posterior amygdaloid nucleusipsiCOAp-1
Nucleus of the lateral olfactory tractipsiLOT-1
Periamygdaloid cortex layer 2ipsiPACL2-1
Amygdalohippocampal areaipsiAHi3
Ventral pallidumipsiVP1
Field CA1 of hippocampusipsiCA11.5
Field CA1 of hippocampus layer stratum lacunosumipsiCA1L6sla-0.5
Field CA1 of hippocampus layer stratum moleculareipsiCA1L7sm-0.5
Field CA1 of hippocampus layer stratum radiatumipsiCA1rad-0.5
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Field CA1 of hippocampus layer stratum oriensipsiCA1or-0.5
Field CA1 of hippocampus temporal partipsiCA1t2
Intermediate subiculumipsiInSu2
ProsubiculumipsiProS2
Subiculum dorsal partipsiSd1
Subiculum dorsal part neuron populations pyramidal neuronsipsiSdNPpy-0.5
Subiculum ventral partipsiSv2
Entorhinal cortexipsiEnt0.5
Entorhinal cortex deep layersipsiEntdL-0.5
Prelimbic cortexipsiPrL3
Prelimbic cortex centroventral partipsiPrLcv3
Prelimbic cortex layer 5ipsiPrLL53
Prelimbic cortex ventral partipsiPrLv1
Infralimbic cortex deep layersipsiILDL3
Infralimbic cortex layer 5ipsiILL53
Agranular insular cortexipsiAI0.5
Prefrontal cortexipsiPFC3
Medial prefrontal cortexipsimPFC2
Medial orbital cortex deep layersipsiMOcxdL3
Interpeduncular nucleus apical subnucleusipsiIPA2
Interpeduncular nucleus lateral subnucleusipsiIPL1
Septal regionipsiSER1
Lateral septal nucleusipsiLS0.5
Lateral spinal nucleus C6ipsiLSpC6-0.5
Area X C6ipsiSCL10C6-0.5
Spinal cord layer 4 C6ipsiSCL4C6-0.5
Spinal cord layer 1 C6ipsiSCL1C6-0.5
Lateral spinal nucleus C7ipsiLSpC7-0.5
Area X C7ipsiSCL10C7-0.5
Spinal cord layer 4 C7ipsiSCL4C7-0.5
Spinal cord layer 1 C7ipsiSCL1C7-0.5
Lateral spinal nucleus C8ipsiLSpC8-0.5
Area X C8ipsiSCL10C8-0.5
Spinal cord layer 4 C8ipsiSCL4C8-0.5
Spinal cord layer 1 C8ipsiSCL1C8-0.5
Lateral spinal nucleus T1ipsiLSpT1-0.5
Area X T1ipsiSCL10T1-0.5
Spinal cord layer 4 T1ipsiSCL4T1-0.5
Spinal cord layer 1 T1ipsiSCL1T1-0.5
Ventral tegmental area A10 medial partcontraVTAM-0.5
Basolateral nucleus caudal partcontraBLCP0.5
Basolateral nucleus rostral partcontraBLRP0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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