University of Rostock

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Rat connectome



Dorsal horn T5 left


Abbreviation
DHT5
Color       
Superior regionsSpinal cord layers T5

SynonymsAbbr.Language
Dorsal horn T5DHT5Eng

SubregionsSide
Deep dorsal horn T5left
Nucleus proprius T5left
Superficial dorsal horn T5left

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG1
Nuclei of the lateral lemniscusipsiNLL1
Inferior colliculusipsiICOL1
Superior colliculusipsiSC1
Central tegmental field dorsal partipsiTGACd0
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleusipsiDTg0
Pedunculopontine tegmental nucleusipsiPPTg1
Mesencephalic reticular formationipsiMRF1
Lateral parabrachial nucleusipsiLPB1
Lateral reticular nucleus magnocellular partipsiLRtMC0
Lateral reticular nucleus parvicellular partipsiLRtPC1
Lateral reticular nucleus subtrigeminal partipsiLRtS50
Nucleus of the solitary tractipsiSol-0.5
Retrotrapezoid nucleusipsiRTN1
HypothalamusipsiHYPO-0.5
Lateral hypothalamic areaipsiLH-0.5
Posterior hypothalamic areaipsiPHA-0.5
Lateral funiculusipsilf-2
TelencephalonipsiTEL-0.5
Amygdaloid complexipsiAC-0.5
Central amygdaloid nucleus anterior partipsiCeAn-0.5
Basal gangliaipsiBG-0.5
Infralimbic cortexipsiIL-0.5
Medial orbital cortexipsiMO-0.5
Ventrolateral funiculusipsivLF-2
Cervical enlargement dorsal hornipsiCSegEd-0.5
Central graycontraCG-0.5
Nuclei of the lateral lemniscuscontraNLL1
Inferior colliculuscontraICOL3
Superior colliculuscontraSC3
Tegmental areacontraTGA-0.5
Central tegmental field dorsal partcontraTGACd0
Laterodorsal tegmental nucleuscontraLDTg1
Dorsal tegmental nucleuscontraDTg0
Pedunculopontine tegmental nucleuscontraPPTg1
Mesencephalic reticular formationcontraMRF3
Cuneiforme nucleuscontraCnF-0.5
Lateral parabrachial nucleuscontraLPB0.5
Lateral reticular nucleus magnocellular partcontraLRtMC1
Lateral reticular nucleus parvicellular partcontraLRtPC2
Lateral reticular nucleus subtrigeminal partcontraLRtS50
Retrotrapezoid nucleuscontraRTN0.5
HypothalamuscontraHYPO-0.5
Superior cervical ganglionipsiAutoSCeG-0.5
MyocardiumipsiOrgsCorMyo-0.5
MyocardiumcontraOrgsCorMyo-0.5

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG0
Dorsolateral periaqueductal gray caudal partipsiPAGdlc0
Ventrolateral periaqueductal gray caudal partipsiPAGvlc0
Ventrolateral periaqueductal gray rostral partipsiPAGvlr0
Ventrolateral tegmental areaipsiVLTg2
Pedunculopontine tegmental nucleusipsiPPTg1
A5 noradrenaline cellsipsiA52
A7 noradrenaline cellsipsiA72
Locus coeruleusipsiLC2
Koelliker Fuse nucleusipsiKF3
Lateral parabrachial nucleus crescent partipsiLPBCr1
Lateral parabrachial nucleus dorsal partipsiLPBD0
Lateral parabrachial nucleus external partipsiLPBE0.5
Lateral parabrachial nucleus ventral partipsiLPBV0
Caudal portion of the parabrachial nucleus central lateral partipsiPBCeLC0.5
Rostral portion of the parabrachial nucleus central lateral partipsiPBCeLR0
Parabrachial nucleus dorsal partipsiPBD-0.5
Parabrachial nucleus medialipsiPBnMe0.5
Medial parabrachial nucleus external partipsiMPBE0.5
Gigantocellular reticular nucleusipsiGi2
Subcoeruleus nucleusipsiSubC2
Nucleus of the solitary tract commissural partipsiSolC-0.5
Raphe magnus nucleusipsiRMg-0.5
Lateral paragigantocellular nucleusipsiLPGi2
Lateral hypothalamic areaipsiLH1
A11 dopamine cellsipsiA111
Parafascicular thalamic nucleus prerubral partipsiPFPR1
Dorsal root ganglion T2ipsiDRGT2-0.5
Dorsal root ganglion T3ipsiDRGT3-0.5
Paralemniscal nucleuscontraPL-0.5
Periaqueductal graycontraPAG0
Dorsolateral periaqueductal gray caudal partcontraPAGdlc0
Ventrolateral periaqueductal gray caudal partcontraPAGvlc0.5
Ventrolateral periaqueductal gray rostral partcontraPAGvlr0.5
Pedunculopontine tegmental nucleuscontraPPTg1
A5 noradrenaline cellscontraA51
A7 noradrenaline cellscontraA71
Locus coeruleuscontraLC1
Koelliker Fuse nucleuscontraKF3
Lateral parabrachial nucleus crescent partcontraLPBCr1
Lateral parabrachial nucleus dorsal partcontraLPBD0
Lateral parabrachial nucleus external partcontraLPBE0.5
Lateral parabrachial nucleus ventral partcontraLPBV0.5
Caudal portion of the parabrachial nucleus central lateral partcontraPBCeLC0.5
Rostral portion of the parabrachial nucleus central lateral partcontraPBCeLR0.5
Parabrachial nucleus medialcontraPBnMe2
Medial parabrachial nucleus external partcontraMPBE0.5
Gigantocellular reticular nucleuscontraGi1
Subcoeruleus nucleuscontraSubC1
Lateral paragigantocellular nucleuscontraLPGi1
A11 dopamine cellscontraA110.5
Parafascicular thalamic nucleus prerubral partcontraPFPR0.5
Stomach wallipsiOrgsStomWS-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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