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Rat connectome



Central tegmental field dorsal part left


Abbreviation
TGACd
Color       
Superior regionsCentral tegmental field

SynonymsAbbr.Language
Central tegmental field dorsal partTGACd 
Dorsal part of central tegmental field  
Dorsal tegmental field  

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG1
Nuclei of the lateral lemniscusipsiNLL0
Interstitial nucleus of medial longitudinal fasciculusipsiIMLF0
Nucleus of DarkschewitschipsiDk1
Inferior colliculusipsiICOL0
Superior colliculusipsiSC0
Substantia nigra compact partipsiSNC1
Substantia nigra lateral partipsiSNL0
Substantia nigra reticular partipsiSNR1
Ventral tegmental area A10ipsiVTA0
Laterodorsal tegmental nucleusipsiLDTg2
Ventral tegmental nucleusipsiVTg0
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg1
Edinger Westphal nucleusipsiEW0
Interposed cerebellar nucleiipsiICN0
Lateral cerebellar nucleusipsiCERL0
Medial cerebellar nucleusipsiMed0
Locus coeruleusipsiLC1
Prepositus nucleusipsiPr2
Deep mesencephalic nucleusipsiDpMe1
Pontine reticular nucleusipsiPRN1
Parabrachial nucleusipsiPB1
Gigantocellular reticular nucleusipsiGi1
Medullary reticular nucleusipsiMdD2
Supragenual nucleusipsiSGe2
Area postremaipsiAP0
Principal sensory trigeminal nucleusipsiPr50
Spinal trigeminal nucleus caudal partipsiSp5C0
Spinal trigeminal nucleus interpolar partipsiSp5I1
Spinal trigeminal nucleus oral partipsiSp5O0
Dorsal cochlear nucleusipsiDC0
Ventral cochlear nucleusipsiVC0
Spinal vestibular nucleusipsiSpVe0
Superior vestibular nucleusipsiSuVe1
Medial vestibular nucleusipsiMVe0
Lateral vestibular nucleusipsiLVe1
Nucleus of the solitary tractipsiSol0
Dorsal raphe nucleusipsiDR1
Linear nucleus of the rapheipsiLIR0
Median raphe nucleusipsiMnR0
Pontine raphe nucleusipsiPnR1
Raphe magnus nucleusipsiRMg0
Cuneate nucleusipsiCu0
GracileipsiGra0
External cuneate nucleusipsiECu0
Superior oliveipsiSuOLi0
Paragigantocellular reticular nucleusipsiPGi1
Lateral paragigantocellular nucleusipsiLPGi0
Endopiriform systemipsiEnN0
Nucleus of the horizontal limb of the diagonal bandipsiHDB0
Nucleus of the vertical limb of the diagonal bandipsiVDB0
Basal nucleus MeynertipsiB0
Substantia innominataipsiSI1
Lateral preoptic areaipsiLPO1
Medial preoptic areaipsiMPA1
Magnocellular preoptic nucleusipsiMCPO1
Tuberomammillary nucleusipsiTuM0
Lateral hypothalamic areaipsiLH1
Ventromedial hypothalamic nucleusipsiVMH0
Paraventricular hypothalamic nucleusipsiPa0
Lateral mammillary nucleusipsiLM0
Medial mammillary nucleusipsiMMn0
Supramammillar nucleusipsiSuM0
Parafascicular thalamic nucleusipsiPF0
Nucleus of the stria medullarisipsiSM0
Zona incertaipsiZI1
Lateral habenular nucleusipsiLHb1
Anterior pretectal nucleusipsiAPT0
Medial terminal nucleus of the accessory optic tractipsiMT1
Bed nucleus of the stria terminalisipsiBST0
Central amygdaloid nucleusipsiCe1
Cortex amygdala transition zoneipsiCxA1
Amygdalopiriform transition areaipsiAPir1
Anterior amygdaloid areaipsiAA0
Medial amygdaloid nucleusipsiMe0
Medial globus pallidusipsiMGP0
Ventral pallidumipsiVP0
Subthalamic nucleusipsiSTh0
Cingulate cortexipsiCg0
Frontal association cortexipsiFrA0
Parietal association cortexipsiPtA0
Temporal cortexipsiTE0
Perirhinal cortexipsiA350
Medial prefrontal cortexipsimPFC0
Orbital cortexipsiOrC1
Magnocellular nucleus of the posterior commissureipsiMCPC1
Interpeduncular nucleusipsiIP1
Lateral septal nucleusipsiLS0
Dorsal horn C1ipsiDHC10
Dorsal horn C2ipsiDHC20
Dorsal horn C3ipsiDHC30
Dorsal horn C4ipsiDHC40
Dorsal horn C5ipsiDHC50
Dorsal horn C6ipsiDHC60
Dorsal horn C7ipsiDHC70
Dorsal horn C8ipsiDHC80
Dorsal horn T1ipsiDHT10
Dorsal horn T2ipsiDHT20
Dorsal horn T3ipsiDHT30
Dorsal horn T4ipsiDHT40
Dorsal horn T5ipsiDHT50
Dorsal horn T6ipsiDHT60
Dorsal horn T7ipsiDHT70
Dorsal horn T8ipsiDHT80
Dorsal horn T9ipsiDHT90
Dorsal horn T10ipsiDHT100
Dorsal horn T11ipsiDHT110
Dorsal horn T12ipsiDHT120
Dorsal horn T13ipsiDHT130
Dorsal horn L1ipsiDHL10
Dorsal horn L2ipsiDHL20
Dorsal horn L3ipsiDHL30
Dorsal horn L4ipsiDHL40
Dorsal horn L5ipsiDHL50
Dorsal horn L6ipsiDHL60
Central graycontraCG1
Nuclei of the lateral lemniscuscontraNLL0
Interstitial nucleus of medial longitudinal fasciculuscontraIMLF0
Nucleus of DarkschewitschcontraDk1
Inferior colliculuscontraICOL0
Superior colliculuscontraSC0
Substantia nigra compact partcontraSNC0
Substantia nigra lateral partcontraSNL0
Substantia nigra reticular partcontraSNR0
Ventral tegmental area A10contraVTA0
Laterodorsal tegmental nucleuscontraLDTg3
Ventral tegmental nucleuscontraVTg0
Dorsal tegmental nucleuscontraDTg1
Pedunculopontine tegmental nucleuscontraPPTg1
Edinger Westphal nucleuscontraEW0
Interposed cerebellar nucleicontraICN0
Lateral cerebellar nucleuscontraCERL0
Medial cerebellar nucleuscontraMed0
Locus coeruleuscontraLC1
Prepositus nucleuscontraPr3
Deep mesencephalic nucleuscontraDpMe1
Pontine reticular nucleuscontraPRN1
Parabrachial nucleuscontraPB1
Gigantocellular reticular nucleuscontraGi0.5
Medullary reticular nucleuscontraMdD2
Supragenual nucleuscontraSGe3
Area postremacontraAP0
Principal sensory trigeminal nucleuscontraPr50
Spinal trigeminal nucleus caudal partcontraSp5C0
Spinal trigeminal nucleus interpolar partcontraSp5I1
Spinal trigeminal nucleus oral partcontraSp5O0
Dorsal cochlear nucleuscontraDC0
Ventral cochlear nucleuscontraVC0
Spinal vestibular nucleuscontraSpVe0
Superior vestibular nucleuscontraSuVe1
Medial vestibular nucleuscontraMVe0
Lateral vestibular nucleuscontraLVe1
Nucleus of the solitary tractcontraSol0
Dorsal raphe nucleuscontraDR0.5
Linear nucleus of the raphecontraLIR0
Median raphe nucleuscontraMnR0
Pontine raphe nucleuscontraPnR1
Raphe magnus nucleuscontraRMg0
Cuneate nucleuscontraCu0
GracilecontraGra0
External cuneate nucleuscontraECu0
Superior olivecontraSuOLi0
Paragigantocellular reticular nucleuscontraPGi1
Lateral paragigantocellular nucleuscontraLPGi0
Endopiriform systemcontraEnN0
Nucleus of the horizontal limb of the diagonal bandcontraHDB0
Nucleus of the vertical limb of the diagonal bandcontraVDB0
Basal nucleus MeynertcontraB0
Substantia innominatacontraSI1
Lateral preoptic areacontraLPO1
Medial preoptic areacontraMPA1
Magnocellular preoptic nucleuscontraMCPO1
Tuberomammillary nucleuscontraTuM0
Lateral hypothalamic areacontraLH1
Ventromedial hypothalamic nucleuscontraVMH0
Paraventricular hypothalamic nucleuscontraPa0
Lateral mammillary nucleuscontraLM0
Medial mammillary nucleuscontraMMn0
Supramammillar nucleuscontraSuM0
Parafascicular thalamic nucleuscontraPF0
Nucleus of the stria medullariscontraSM0
Zona incertacontraZI1
Lateral habenular nucleuscontraLHb1
Anterior pretectal nucleuscontraAPT0
Medial terminal nucleus of the accessory optic tractcontraMT1
Bed nucleus of the stria terminaliscontraBST0
Central amygdaloid nucleuscontraCe0
Cortex amygdala transition zonecontraCxA0.5
Amygdalopiriform transition areacontraAPir1
Anterior amygdaloid areacontraAA0
Medial amygdaloid nucleuscontraMe0
Medial globus palliduscontraMGP0
Ventral pallidumcontraVP0
Subthalamic nucleuscontraSTh0
Cingulate cortexcontraCg0
Frontal association cortexcontraFrA0
Parietal association cortexcontraPtA0
Temporal cortexcontraTE0
Perirhinal cortexcontraA350
Medial prefrontal cortexcontramPFC0
Orbital cortexcontraOrC1
Magnocellular nucleus of the posterior commissurecontraMCPC1
Interpeduncular nucleuscontraIP1
Lateral septal nucleuscontraLS0
Dorsal horn C1contraDHC10
Dorsal horn C2contraDHC20
Dorsal horn C3contraDHC30
Dorsal horn C4contraDHC40
Dorsal horn C5contraDHC50
Dorsal horn C6contraDHC60
Dorsal horn C7contraDHC70
Dorsal horn C8contraDHC80
Dorsal horn T1contraDHT10
Dorsal horn T2contraDHT20
Dorsal horn T3contraDHT30
Dorsal horn T4contraDHT40
Dorsal horn T5contraDHT50
Dorsal horn T6contraDHT60
Dorsal horn T7contraDHT70
Dorsal horn T8contraDHT80
Dorsal horn T9contraDHT90
Dorsal horn T10contraDHT100
Dorsal horn T11contraDHT110
Dorsal horn T12contraDHT120
Dorsal horn T13contraDHT130
Dorsal horn L1contraDHL10
Dorsal horn L2contraDHL20
Dorsal horn L3contraDHL30
Dorsal horn L4contraDHL40
Dorsal horn L5contraDHL50
Dorsal horn L6contraDHL60

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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