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Rat connectome

Telencephalon left

Abbreviation	TEL
Color
Superior regions	Prosencephalon

Synonyms	Abbr.	Language
Cortical plate		Eng
Telencephalic region		Eng
Telencephalon	TEL	Eng

Subregions	Side
Accessory optic system	left
Amygdaloid complex	left
Area dorsal to the interpeduncular nucleus and the pontine gray	left
Area X of Hall and Geneser-Jensen	left
Basal ganglia	left
Bed nucleus of the anterior commissure	left
Cerebral cortex	left
Commissural systems	left
Geniculate body	left
Interpeduncular nucleus	left
Olfactory system	left
Paracommissural nucleus of the posterior commissure	left
Septal region	left
Stria terminalis	left
Zona limitans	left
Close to the septum	left
Ventral telencephalon	left

Output to

Name	Side	Abbr.	Weight
Periaqueductal gray rostrolateral part	ipsi	PAGRL	-0.5
Pontine reticular nucleus	ipsi	PRN	-0.5
Arcuate nucleus	ipsi	Arc	-0.5
Amygdaloid complex	ipsi	AC	3
Accumbens nucleus	ipsi	Ac	3
Auditory regions	ipsi	AU	-0.5
Motoric regions	ipsi	M	-0.5
Lateral agranular prefrontal cortex	ipsi	AGl	2
Sensory regions	ipsi	SR	-0.5
Visual regions	ipsi	VR	-0.5
Lateral septal nucleus	ipsi	LS	-0.5
Lateral septal nucleus caudal part	ipsi	LSc	3

Input from

Name	Side	Abbr.	Weight
Ventral tegmental tail	ipsi	VTTa	1
Gigantocellular reticular nucleus	ipsi	Gi	-0.5
Dorsal paragigantocellular nucleus	ipsi	DPGi	-0.5
Area X C1	ipsi	SCL10C1	-0.5
Dorsal horn C1	ipsi	DHC1	-0.5
Spinal cord layer 5 C1	ipsi	SCL5C1	-0.5
Spinal cord layer 3 C1	ipsi	SCL3C1	-0.5
Spinal cord layer 4 C1	ipsi	SCL4C1	-0.5
Area X C2	ipsi	SCL10C2	-0.5
Dorsal horn C2	ipsi	DHC2	-0.5
Spinal cord layer 5 C2	ipsi	SCL5C2	-0.5
Spinal cord layer 3 C2	ipsi	SCL3C2	-0.5
Spinal cord layer 4 C2	ipsi	SCL4C2	-0.5
Area X C3	ipsi	SCL10C3	-0.5
Dorsal horn C3	ipsi	DHC3	-0.5
Spinal cord layer 5 C3	ipsi	SCL5C3	-0.5
Spinal cord layer 3 C3	ipsi	SCL3C3	-0.5
Spinal cord layer 4 C3	ipsi	SCL4C3	-0.5
Area X C4	ipsi	SCL10C4	-0.5
Dorsal horn C4	ipsi	DHC4	-0.5
Spinal cord layer 5 C4	ipsi	SCL5C4	-0.5
Spinal cord layer 3 C4	ipsi	SCL3C4	-0.5
Spinal cord layer 4 C4	ipsi	SCL4C4	-0.5
Area X C5	ipsi	SCL10C5	-0.5
Dorsal horn C5	ipsi	DHC5	-0.5
Spinal cord layer 5 C5	ipsi	SCL5C5	-0.5
Spinal cord layer 3 C5	ipsi	SCL3C5	-0.5
Spinal cord layer 4 C5	ipsi	SCL4C5	-0.5
Area X C6	ipsi	SCL10C6	-0.5
Dorsal horn C6	ipsi	DHC6	-0.5
Spinal cord layer 5 C6	ipsi	SCL5C6	-0.5
Spinal cord layer 3 C6	ipsi	SCL3C6	-0.5
Spinal cord layer 4 C6	ipsi	SCL4C6	-0.5
Area X C7	ipsi	SCL10C7	-0.5
Dorsal horn C7	ipsi	DHC7	-0.5
Spinal cord layer 5 C7	ipsi	SCL5C7	-0.5
Spinal cord layer 3 C7	ipsi	SCL3C7	-0.5
Spinal cord layer 4 C7	ipsi	SCL4C7	-0.5
Area X C8	ipsi	SCL10C8	-0.5
Dorsal horn C8	ipsi	DHC8	-0.5
Spinal cord layer 5 C8	ipsi	SCL5C8	-0.5
Spinal cord layer 3 C8	ipsi	SCL3C8	-0.5
Spinal cord layer 4 C8	ipsi	SCL4C8	-0.5
Area X T1	ipsi	SCL10T1	-0.5
Dorsal horn T1	ipsi	DHT1	-0.5
Spinal cord layer 5 T1	ipsi	SCL5T1	-0.5
Spinal cord layer 3 T1	ipsi	SCL3T1	-0.5
Spinal cord layer 4 T1	ipsi	SCL4T1	-0.5
Area X T2	ipsi	SCL10T2	-0.5
Dorsal horn T2	ipsi	DHT2	-0.5
Spinal cord layer 5 T2	ipsi	SCL5T2	-0.5
Spinal cord layer 3 T2	ipsi	SCL3T2	-0.5
Spinal cord layer 4 T2	ipsi	SCL4T2	-0.5
Area X T3	ipsi	SCL10T3	-0.5
Dorsal horn T3	ipsi	DHT3	-0.5
Spinal cord layer 5 T3	ipsi	SCL5T3	-0.5
Spinal cord layer 3 T3	ipsi	SCL3T3	-0.5
Spinal cord layer 4 T3	ipsi	SCL4T3	-0.5
Area X T4	ipsi	SCL10T4	-0.5
Dorsal horn T4	ipsi	DHT4	-0.5
Spinal cord layer 5 T4	ipsi	SCL5T4	-0.5
Spinal cord layer 3 T4	ipsi	SCL3T4	-0.5
Spinal cord layer 4 T4	ipsi	SCL4T4	-0.5
Area X T5	ipsi	SCL10T5	-0.5
Dorsal horn T5	ipsi	DHT5	-0.5
Spinal cord layer 5 T5	ipsi	SCL5T5	-0.5
Spinal cord layer 3 T5	ipsi	SCL3T5	-0.5
Spinal cord layer 4 T5	ipsi	SCL4T5	-0.5
Area X T6	ipsi	SCL10T6	-0.5
Dorsal horn T6	ipsi	DHT6	-0.5
Spinal cord layer 5 T6	ipsi	SCL5T6	-0.5
Spinal cord layer 3 T6	ipsi	SCL3T6	-0.5
Spinal cord layer 4 T6	ipsi	SCL4T6	-0.5
Area X T7	ipsi	SCL10T7	-0.5
Dorsal horn T7	ipsi	DHT7	-0.5
Spinal cord layer 5 T7	ipsi	SCL5T7	-0.5
Spinal cord layer 3 T7	ipsi	SCL3T7	-0.5
Spinal cord layer 4 T7	ipsi	SCL4T7	-0.5
Area X T8	ipsi	SCL10T8	-0.5
Dorsal horn T8	ipsi	DHT8	-0.5
Spinal cord layer 5 T8	ipsi	SCL5T8	-0.5
Spinal cord layer 3 T8	ipsi	SCL3T8	-0.5
Spinal cord layer 4 T8	ipsi	SCL4T8	-0.5
Area X T9	ipsi	SCL10T9	-0.5
Dorsal horn T9	ipsi	DHT9	-0.5
Spinal cord layer 5 T9	ipsi	SCL5T9	-0.5
Spinal cord layer 3 T9	ipsi	SCL3T9	-0.5
Spinal cord layer 4 T9	ipsi	SCL4T9	-0.5
Area X T10	ipsi	SCL10T10	-0.5
Dorsal horn T10	ipsi	DHT10	-0.5
Spinal cord layer 5 T10	ipsi	SCL5T10	-0.5
Spinal cord layer 3 T10	ipsi	SCL3T10	-0.5
Spinal cord layer 4 T10	ipsi	SCL4T10	-0.5
Area X T11	ipsi	SCL10T11	-0.5
Dorsal horn T11	ipsi	DHT11	-0.5
Spinal cord layer 5 T11	ipsi	SCL5T11	-0.5
Spinal cord layer 3 T11	ipsi	SCL3T11	-0.5
Spinal cord layer 4 T11	ipsi	SCL4T11	-0.5
Area X T12	ipsi	SCL10T12	-0.5
Dorsal horn T12	ipsi	DHT12	-0.5
Spinal cord layer 5 T12	ipsi	SCL5T12	-0.5
Spinal cord layer 3 T12	ipsi	SCL3T12	-0.5
Spinal cord layer 4 T12	ipsi	SCL4T12	-0.5
Area X T13	ipsi	SCL10T13	-0.5
Dorsal horn T13	ipsi	DHT13	-0.5
Spinal cord layer 5 T13	ipsi	SCL5T13	-0.5
Spinal cord layer 3 T13	ipsi	SCL3T13	-0.5
Spinal cord layer 4 T13	ipsi	SCL4T13	-0.5
Area X L1	ipsi	SCL10L1	-0.5
Dorsal horn L1	ipsi	DHL1	-0.5
Spinal cord layer 5 L1	ipsi	SCL5L1	-0.5
Spinal cord layer 3 L1	ipsi	SCL3L1	-0.5
Spinal cord layer 4 L1	ipsi	SCL4L1	-0.5
Area X L2	ipsi	SCL10L2	-0.5
Dorsal horn L2	ipsi	DHL2	-0.5
Spinal cord layer 5 L2	ipsi	SCL5L2	-0.5
Spinal cord layer 3 L2	ipsi	SCL3L2	-0.5
Spinal cord layer 4 L2	ipsi	SCL4L2	-0.5
Area X L3	ipsi	SCL10L3	-0.5
Dorsal horn L3	ipsi	DHL3	-0.5
Spinal cord layer 5 L3	ipsi	SCL5L3	-0.5
Spinal cord layer 3 L3	ipsi	SCL3L3	-0.5
Spinal cord layer 4 L3	ipsi	SCL4L3	-0.5
Area X L4	ipsi	SCL10L4	-0.5
Dorsal horn L4	ipsi	DHL4	-0.5
Spinal cord layer 5 L4	ipsi	SCL5L4	-0.5
Spinal cord layer 3 L4	ipsi	SCL3L4	-0.5
Spinal cord layer 4 L4	ipsi	SCL4L4	-0.5
Area X L5	ipsi	SCL10L5	-0.5
Dorsal horn L5	ipsi	DHL5	-0.5
Spinal cord layer 5 L5	ipsi	SCL5L5	-0.5
Spinal cord layer 3 L5	ipsi	SCL3L5	-0.5
Spinal cord layer 4 L5	ipsi	SCL4L5	-0.5
Area X L6	ipsi	SCL10L6	-0.5
Dorsal horn L6	ipsi	DHL6	-0.5
Spinal cord layer 5 L6	ipsi	SCL5L6	-0.5
Spinal cord layer 3 L6	ipsi	SCL3L6	-0.5
Spinal cord layer 4 L6	ipsi	SCL4L6	-0.5
Area X S1	ipsi	SCL10S1	-0.5
Dorsal horn S1	ipsi	DHS1	-0.5
Spinal cord layer 5 S1	ipsi	SCL5S1	-0.5
Spinal cord layer 3 S1	ipsi	SCL3S1	-0.5
Spinal cord layer 4 S1	ipsi	SCL4S1	-0.5
Area X S2	ipsi	SCL10S2	-0.5
Dorsal horn S2	ipsi	DHS2	-0.5
Spinal cord layer 5 S2	ipsi	SCL5S2	-0.5
Spinal cord layer 3 S2	ipsi	SCL3S2	-0.5
Spinal cord layer 4 S2	ipsi	SCL4S2	-0.5
Area X S3	ipsi	SCL10S3	-0.5
Dorsal horn S3	ipsi	DHS3	-0.5
Spinal cord layer 5 S3	ipsi	SCL5S3	-0.5
Spinal cord layer 3 S3	ipsi	SCL3S3	-0.5
Spinal cord layer 4 S3	ipsi	SCL4S3	-0.5
Area X S4	ipsi	SCL10S4	-0.5
Dorsal horn S4	ipsi	DHS4	-0.5
Spinal cord layer 5 S4	ipsi	SCL5S4	-0.5
Spinal cord layer 3 S4	ipsi	SCL3S4	-0.5
Spinal cord layer 4 S4	ipsi	SCL4S4	-0.5
Area X Co1	ipsi	SCL10Co1	-0.5
Dorsal horn Co1	ipsi	DHCo1	-0.5
Spinal cord layer 5 Co1	ipsi	SCL5Co1	-0.5
Spinal cord layer 3 Co1	ipsi	SCL3Co1	-0.5
Spinal cord layer 4 Co1	ipsi	SCL4Co1	-0.5
Area X Co2	ipsi	SCL10Co2	-0.5
Dorsal horn Co2	ipsi	DHCo2	-0.5
Spinal cord layer 5 Co2	ipsi	SCL5Co2	-0.5
Spinal cord layer 3 Co2	ipsi	SCL3Co2	-0.5
Spinal cord layer 4 Co2	ipsi	SCL4Co2	-0.5
Area X Co3	ipsi	SCL10Co3	-0.5
Dorsal horn Co3	ipsi	DHCo3	-0.5
Spinal cord layer 5 Co3	ipsi	SCL5Co3	-0.5
Spinal cord layer 3 Co3	ipsi	SCL3Co3	-0.5
Spinal cord layer 4 Co3	ipsi	SCL4Co3	-0.5
Gigantocellular reticular nucleus	contra	Gi	-0.5
Dorsal paragigantocellular nucleus	contra	DPGi	-0.5
Nasal cavity	ipsi	OrgNaCa	2

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong