University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Periaqueductal gray rostrolateral part left


Abbreviation
PAGRL
Color       
Superior regionsPeriaqueductal gray rostral part

SynonymsAbbr.Language
Rostrolateral part of the periaqueductal gray  
Rostrolateral periaqueductal gray  
Periaqueductal gray rostrolateral divisionPAGrlEng
Periaqueductal gray rostrolateral partPAGRLEng

Output to

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Peduncularpontine nucleusipsiPPN-0.5
Substantia nigra compact partipsiSNC1.5
Ventral tegmental area A10ipsiVTA1
Parabrachial pigmented nucleusipsiPBP1
Retrorubral nucleusipsiRR1.5
Laterodorsal tegmental nucleusipsiLDTg-0.5
A5 noradrenaline cellsipsiA5-0.5
Locus coeruleusipsiLC-0.5
Ventral pontine nucleus caudalisipsiVBPNc1.5
Magnocellular reticular nucleusipsiNRMC1.5
Rostroventrolateral reticular nucleusipsiRVL-0.5
Mesencephalic reticular formationipsiMRF1.5
Pontine reticular nucleus oral partipsiPnO-0.5
Lateral parabrachial nucleusipsiLPB3
Subcoeruleus nucleusipsiSubC-0.5
Medulla oblongataipsiMeOb0.5
Ambiguus nucleusipsiAmb-0.5
Nucleus of the solitary tractipsiSol0
Dorsal motor nucleus of vagusipsi100
Dorsal raphe nucleusipsiDR-0.5
Midline apneic siteipsiMAS3
Raphe magnus nucleusipsiRMg3
Paragigantocellular reticular nucleusipsiPGi3
Lateral preoptic areaipsiLPO1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic areaipsiLH-0.5
Lateral hypothalamic area dorsal partipsiLHd-0.5
Lateral hypothalamic area juxtadorsomedial regionipsiJDM-0.5
Lateral hypothalamic area suprafornical regionipsiLHAs-0.5
Lateral hypothalamic area ventromedial partipsiLHvm-0.5
Central medial thalamic nucleusipsiCM2
Centrolateral thalamic nucleusipsiCL2
Paracentral thalamic nucleusipsiPC1
Parafascicular thalamic nucleusipsiPF1
Rhomboid thalamic nucleusipsiRh1
Intermediodorsal thalamic nucleusipsiIMD2
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleus middle divisionipsiPVMiD2
Reuniens thalamic nucleusipsiRe3
Ventromedial thalamic nucleus caudal partipsiVMc2
Intralaminar nucleiipsiILN-0.5
Parafascicular nucleusipsiPFa1
Subparafascicular thalamic nucleus parvicellular partipsiSPFp-0.5
Zona incertaipsiZI3
Bed nucleus of the stria terminalis posterior divisionipsiBSTP1
Bed nucleus of the stria terminalis transverse nucleusipsiBSTt1
Interfascicular nucleus of the bed nucleus of the stria terminalis posterior divisionipsiBSTPif1
Central amygdaloid nucleus medial divisionipsiCeM1
Lateral geniculate complexipsiLG1
Midline apneic sitecontraMAS3
Raphe magnus nucleuscontraRMg-0.5
Paragigantocellular reticular nucleuscontraPGi-0.5

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG1
Dorsomedial periaqueductal grayipsiDMPAG-0.5
Ventrolateral periaqueductal grayipsiVLPAG2
Superior colliculus intermediate layersipsiSCi2
Laterodorsal tegmental nucleusipsiLDTg1
Lateral parabrachial nucleus dorsal partipsiLPBD1
Lateral parabrachial nucleus ventral partipsiLPBV1
MyelencephalonipsiMYC3
Dorsal raphe nucleusipsiDR-0.5
Medial preoptic areaipsiMPA1
Median preoptic nucleusipsiMnPO3
HypothalamusipsiHYPO3
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area juxtadorsomedial regionipsiJDM3
Lateral hypothalamic area juxtaventromedialipsiLHjvm3
Lateral hypothalamic area suprafornical regionipsiLHAs3
Tuberal nucleusipsiTU2
Anterior hypothalamic areaipsiAHA1
Anterior hypothalamic area anterior partipsiAHAA-0.5
Anteroventral preoptic nucleusipsiAnV-0.5
Posterior hypothalamic nucleus rostral partipsiPHRo2
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus central partipsiVMHC2
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL2
Nucleus properipsiSOnP3
Premammillary nucleus dorsal partipsiPMD3
Retrochiasmatic areaipsiRCh2
ThalamusipsiT3
Zona incertaipsiZI1
Zona incerta ventral partipsiZIV3
Optic tract dorsal partipsioptd3
TelencephalonipsiTEL-0.5
Amygdaloid complexipsiAC3
Bed nucleus of the stria terminalis posterior divisionipsiBSTP3
Central amygdaloid nucleus medial divisionipsiCeM3
Anterior cingulate cortexipsiACC3
Prelimbic cortexipsiPrL3
Infralimbic cortexipsiIL3
NeocortexipsiNEOCX-0.5
Agranular insular cortex parietal partipsiAIpar1
Gustatory dysgranular insular cortexipsiDIg-0.5
Visceral dysgranular insular cortexipsiDIv-0.5
Perirhinal cortexipsiA351
Ectorhinal cortexipsiA361
Prefrontal cortexipsiPFC1
Lateral agranular prefrontal cortexipsiAGl1
Medial agranular prefrontal cortexipsiAGm3
Precommissural nucleusipsiPrC3
Septal regionipsiSER-0.5
Lateral septal nucleus dorsal partipsiLSD-2
Lateral septal nucleus rostral partipsiLSr-2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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