University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Parabrachial pigmented nucleus left


Abbreviation
PBP
Color       
Superior regionsDopaminergic nuclear complex

SynonymsAbbr.Language
Nucleus parabrachialis pigmentosusNpbpL
Parabrachial pigmented nucleusPBPEng
Ventral tegmental subnucleus parabrachialis pigmentosus Eng
Parabrachial pigmented area Eng

SubregionsSide
Parabrachial pigmented nucleus rostral partleft
Parabrachial pigmented nucleus rostrodorsal partleft
Parabrachial pigmented nucleus ventral partleft
Medial parabrachial pigmented nucleusleft
Parabrachial pigmented nucleus rostrolateral partleft
Parabrachial pigmented nucleus caudal partleft
Parabrachial pigmented nucleus dorsal partleft

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk-0.5
Dorsal terminal nucleus of the accessory optic tractipsiDT0
Superior colliculusipsiSC0
Parabrachial pigmented nucleusipsiPBP0
Paranigral nucleusipsiPN-0.5
Interstitial nucleus of CajalipsiInC-0.5
FlocculusipsiFl0
Pontine grayipsiPG0
Reticulotegmental nucleus of the ponsipsiRtTg1
Deep mesencephalic nucleus medial partipsiDpMeM0
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus oral partipsiPnO-0.5
Cuneiforme nucleusipsiCnF-0.5
Superior vestibular nucleusipsiSuVe0
Lateral vestibular nucleusipsiLVe0
Inferior oliveipsiIO0
Paragigantocellular reticular nucleusipsiPGi1
Caudal ventral medulla oblongataipsiCVMeO1
Diagonal band of BrocaipsiDBB2
Anteroventral thalamic nucleusipsiAV0
Central medial thalamic nucleusipsiCM1
Centrolateral thalamic nucleusipsiCL0
Paracentral thalamic nucleus caudal partipsiPC-c2
Paracentral thalamic nucleus rostral partipsiPC-r1
Parafascicular thalamic nucleus lateral partipsiPFL3
Parafascicular thalamic nucleus medial partipsiPFM3
Rhomboid thalamic nucleusipsiRh1
Mediodorsal thalamic nucleusipsiMD2
Intermediodorsal thalamic nucleusipsiIMD2
Submedius thalamic nucleusipsiSub0
Paratenial thalamic nucleusipsiPT0
Paraventricular thalamic nucleus anterior partipsiPVA1
Paraventricular thalamic nucleus medial partipsiPVM1
Paraventricular thalamic nucleus posterior partipsiPVP1
Reuniens thalamic nucleusipsiRe3
Ventral posterior thalamic nucleus parvicellular partipsiVPPC1
Ventromedial thalamic nucleus caudal partipsiVMc1
Oval paracentral thalamic nucleusipsiOPC1
Nucleus of the optic tractipsiOT0
Lateral habenular nucleusipsiLHb2
Medial terminal nucleus of the accessory optic tractipsiMT0
Amygdaloid complexipsiAC3
Lateral amygdaloid nucleusipsiLA3
Bed nucleus of the stria terminalisipsiBST2
Central amygdaloid nucleusipsiCe2
Central amygdaloid nucleus medial divisionipsiCeM-0.5
Interstitial nucleus of the posterior limb of the anterior commissureipsiIPAC3
Sublenticular extended amygdalaipsiSLEA3
Medial division of the sublenticular extended amygdalaipsiSLEAm-1
Medial amygdaloid nucleusipsiMe3
Globus pallidusipsiGP3
Ventral pallidumipsiVP2
Ventral pallidum dorsolateral partipsiVPdl3
Ventral pallidum ventromedial partipsiVPvm3
Accumbens nucleusipsiAc2.5
Accumbens nucleus coreipsiAcbC4
Accumbens nucleus shellipsiAcbSh3
Lateral accumbens shellipsiAcbShl4
Medial accumbens shellipsiAcbShm4
Lateral nucleus accumbensipsiAcl2
Caudate putamenipsiCPu3
Anteromedial striatumipsiCPuam2
Caudal striatum ventrolateral partipsiCPuVL3
Dorsal striatumipsiCPud4
Ventrolateral striatumipsiCPuvl2
Ventromedial striatumipsiCPuvm3
Lateral striatumipsiCPul3
Fundus of the striatumipsiFS3
Dentate gyrusipsiDG2
Field CA1 of hippocampusipsiCA12
Field CA3 of hippocampusipsiCA32
Subiculum dorsal partipsiSd-0.5
Piriform cortexipsiPir2
Anterior cingulate cortexipsiACC2
Prefrontal cortexipsiPFC2
Medial agranular prefrontal cortexipsiAGm-0.5
Visual regionsipsiVR3
Olfactory tubercleipsiTuO-0.5
Olfactory tubercle lateral partipsiTuOL3
Olfactory tubercle medial partipsiTuOMP3
Spinal cord layers L1ipsiSCLL11
Spinal cord layers L2ipsiSCLL21
Reticulotegmental nucleus of the ponscontraRtTg1
Paragigantocellular reticular nucleuscontraPGi-0.5
Caudate putamencontraCPu1
Dentate gyruscontraDG1
Field CA1 of hippocampuscontraCA11
Field CA3 of hippocampuscontraCA31
Subiculum dorsal partcontraSd-0.5
Musculus abductor caudae dorsalisipsiMuscAbdCaDo-10

Input from

NameSideAbbr.WeightDetails
Periaqueductal gray rostrolateral partipsiPAGRL1
Rostromedial tegmental nucleus dorsomedial partipsiRMTgDM3
Rostromedial tegmental nucleus coreipsiRMTgC2
Substantia nigra compact partipsiSNC0
Substantia nigra reticular partipsiSNR0
Ventral tegmental area A10 caudal partipsiVTAcp2.5
Ventral tegmental area A10 caudoventromedialipsiVTACVM2.5
Ventral tegmental area A10 ventrolateral partipsiVTAvl-0.5
Ventral tegmental area rostral dorsomedial partipsiVTARdm1
Ventral tegmental area rostrodorsolateral partipsiVTARDL1
Ventral tegmental area caudodorsomedial partipsiVTACDM2.5
Parabrachial pigmented nucleusipsiPBP0
Paranigral nucleusipsiPN0
Visual tegmental relay zoneipsiViTRZo0
Rostral linear nucleus of the rapheipsiRLi-3
Preoptic regionipsiPREO2
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area perifornical partipsiPFx2
Anterior hypothalamic areaipsiAHA3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Posterior hypothalamic areaipsiPHA2
Tuberal areaipsiTA1
Ventromedial hypothalamic nucleusipsiVMH3
Paraventricular hypothalamic nucleusipsiPa-0.5
Mammillary bodyipsiCMAM1
Supramammillar nucleusipsiSuM1
Tuber cinereum areaipsiTC-0.5
Lateral habenular nucleusipsiLHb-0.5
Lateral habenular nucleus lateral partipsiLHbL3
Lateral habenular nucleus lateral part parvocellular subnucleusipsiLHbLPc-0.5
Lateral habenular nucleus rostral half of the lateral partipsiLHbRhL-0.5
Lateral habenular nucleus medial partipsiLHbM4
Ventral part of the medial terminal nucleus of the accessory optic tractipsiMTV0
Dorsal part of the medial terminal nucleus of the accessory optic tractipsiMTD0
Amygdaloid complexipsiAC-0.5
Extended amygdalaipsiEXA-0.5
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM3
Periamygdaloid complexipsiPAC0
Periamygdaloid complex medial divisionipsiPACm0
Periamygdaloid complex sulcal divisionipsiPACs0
Accumbens nucleusipsiAc-0.5
Accumbens nucleus caudomedial shellipsiAcbShcm3
Prefrontal cortexipsiPFC-0.5
Ventral tegmental area A10 caudal partcontraVTAcp2.5
Ventral tegmental area A10 caudoventromedialcontraVTACVM1
Ventral tegmental area rostral dorsomedial partcontraVTARdm1
Lateral habenular nucleus lateral partcontraLHbL-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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