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Rat connectome



Infralimbic cortex rostral part right


Abbreviation
ILR
Color       
Superior regionsInfralimbic cortex

SynonymsAbbr.Language
Infralimbic cortex rostral partILR 

SubregionsSide
Infralimbic cortex rostral part layer 2right
Infralimbic cortex rostral part layer 5right
Infralimbic cortex rostral part layer 6right
Infralimbic cortex rostral part layer 1right

Output to

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal graycontraVLPAG2.5
Lateral orbital cortexcontraLO0
Ventrolateral periaqueductal grayipsiVLPAG3
Superior colliculusipsiSC0
Laterodorsal tegmental nucleusipsiLDTg1
Locus coeruleusipsiLC1
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe1
Nucleus of the solitary tract commissural partipsiSolC-0.5
Nucleus of the solitary tract medial partipsiSolM-0.5
Dorsal endopiriform nucleusipsiDEn-0.5
Medial septal nucleusipsiMS2.5
Lateral preoptic areaipsiLPO2.5
Interoanteromedial thalamic nucleusipsiIAM1.5
Rhomboid thalamic nucleusipsiRh1.5
Intermediodorsal thalamic nucleusipsiIMD1.5
Mediodorsal thalamic nucleus medial partipsiMDM2.5
Paratenial thalamic nucleusipsiPT2.5
Paraventricular thalamic nucleusipsiPV1.5
Reuniens thalamic nucleusipsiRe1.5
Reuniens thalamic nucleus ventral partipsiReV1.5
Ventrolateral part of the lateral nucleusipsiLaVL-0.5
Bed nucleus of the stria terminalisipsiBST-0.5
Interstitial nucleus of the posterior limb of the anterior commissureipsiIPAC-0.5
Medial amygdaloid nucleusipsiMe-0.5
ClaustrumipsiCl-0.5
Ventral pallidumipsiVP-0.5
Accumbens nucleusipsiAc-0.5
Cingulate cortexipsiCg0.5
Lateral orbital cortexipsiLO1
Olfactory tubercleipsiTuO1
Lateral septal nucleusipsiLS2.5

Input from

NameSideAbbr.WeightDetails
Infralimbic cortex layer 5contraILL52.5
Infralimbic cortex layer 6contraILL62.5
Infralimbic cortex layer 3contraILL32.5
Central grayipsiCG-0.5
Laterodorsal tegmental nucleusipsiLDTg1
Ventral tegmental nucleusipsiVTg-0.5
Locus coeruleusipsiLC1
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe1
Dorsal endopiriform nucleusipsiDEn-0.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB2.5
Nucleus of the vertical limb of the diagonal bandipsiVDB2.5
Medial septal nucleusipsiMS1
Lateral preoptic areaipsiLPO2.5
Tuberomammillary nucleusipsiTuM1
Dorsal regionipsiDHR1.5
Lateral hypothalamic areaipsiLH1.5
Posterior hypothalamic areaipsiPHA1.5
Medial mammillary nucleusipsiMMn1
Supramammillar nucleusipsiSuM1
Interoanteromedial thalamic nucleusipsiIAM1.5
Rhomboid thalamic nucleusipsiRh1.5
Intermediodorsal thalamic nucleusipsiIMD1.5
Mediodorsal thalamic nucleus medial partipsiMDM2.5
Paratenial thalamic nucleusipsiPT2
Paraventricular thalamic nucleusipsiPV1.5
Reuniens thalamic nucleusipsiRe1.5
Reuniens thalamic nucleus ventral partipsiReV1.5
Anterior basolateral nucleusipsiBLA2.5
Posterior basolateral nucleusipsiBLP2.5
Ventral basolateral nucleusipsiBLV2.5
Basomedial amygdaloid nucleusipsiBM2.5
Dorsolateral part of the lateral nucleusipsiLaDL2.5
Ventromedial part of the lateral nucleusipsiLaVM2.5
Amygdalopiriform transition areaipsiAPir1.5
Anterior amygdaloid areaipsiAA1.5
Anterior cortical amygdaloid nucleusipsiACo2.5
Posterolateral cortical nucleusipsiPLCo2.5
Amygdalohippocampal areaipsiAHi1.5
ClaustrumipsiCl-0.5
Field CA1 of hippocampusipsiCA12.5
Piriform cortexipsiPir1.5
Cingulate cortexipsiCg0.5
Infralimbic cortex layer 5ipsiILL52.5
Infralimbic cortex layer 6ipsiILL62.5
Infralimbic cortex layer 3ipsiILL32.5
Agranular insular cortexipsiAI2.5
Olfactory tubercleipsiTuO1
Lateral septal nucleusipsiLS1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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