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Rat connectome



Paraventricular thalamic nucleus right


Abbreviation
PV
Color       
Superior regionsMidline group of the dorsal thalamus

SynonymsAbbr.Language
Paraventricular thalamusPVTEng
Paraventricular nucleus of thalamus  
Paraventricular nucleus of the thalamicPVTEng
Nucleus paraventricularis thalamiPVTLat
Paraventricular nucleus thalamusPVTEng
Paraventricular nucleus thalamusPVTEng
Paraventricular thalamic nucleusPVTEng
Paraventricular thalamic nucleusPVEng
Thalamic paraventricular nucleus Eng
Rostral hypothalamus at the border of the third ventricle Lat
Paraventricular midline thalamic nucleus Eng

SubregionsSide
Paraventricular thalamic nucleus anterior partright
Paraventricular thalamic nucleus anteriorventral partright
Paraventricular thalamic nucleus anteroposterior partright
Paraventricular thalamic nucleus caudal partright
Paraventricular thalamic nucleus dorsal partright
Paraventricular thalamic nucleus dorsolateral partright
Paraventricular thalamic nucleus lateral partright
Paraventricular thalamic nucleus medial partright
Paraventricular thalamic nucleus middle divisionright
Paraventricular thalamic nucleus midrostral part ventral divisionright
Paraventricular thalamic nucleus posterior partright
Paraventricular thalamic nucleus rostral partright
Paraventricular thalamic nucleus rostrocaudal partright
Paraventricular thalamic nucleus ventral partright
Paraventricular thalamic nucleus mid-caudal levelright
Paraventricular thalamic nucleus medial lateral transition zoneright
Paraventricular thalamic nucleus rostrodorsal partright
Central paraventricular thalamic nucleusright
Paraventricular thalamic nucleus rostrocaudal extentright
Paraventricular thalamic nucleus dorsomedial aspectright
Paraventricular thalamic nucleus stellatocellularisright
Paraventricular thalamic nucleus rotundocellularisright
Paraventricular thalamic nucleus dorsoventral extentright

Output to

NameSideAbbr.WeightDetails
Central graycontraCG2.5
Central gray dorsal partcontraCGD1
Dorsolateral periaqueductal graycontraDLPAG1
Lateral periaqueductal graycontraLPAG1
Periaqueductal gray medial partcontraPAGm1
Ventrolateral periaqueductal graycontraVLPAG0
A5 noradrenaline cellscontraA50
Locus coeruleuscontraLC1
Dorsal raphe nucleuscontraDR1
Medial raphe nucleuscontraMeR0
Inferior salivatory nucleuscontraIS0
Superior salivatory nucleuscontraSuS0
Horizontal branch of diagonal band of BrocacontraHBDBB0
Lateral preoptic areacontraLPO0
Medial preoptic areacontraMPA1
Medial preoptic nucleuscontraMPO1
HypothalamuscontraHYPO-0.5
Dorsomedial hypothalamic nucleus non-compact partcontraDMHyncp-0.5
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR0
Lateral zonecontraLHA-0.5
Lateral hypothalamic areacontraLH1
Lateral hypothalamic area lateral partcontraLHAL3
Lateral hypothalamic area perifornical partcontraPFx0
Dorsomedial hypothalamic nucleus [Medial zone]contraDM1
Posterior hypothalamic nucleuscontraPH1
Ventromedial hypothalamic nucleuscontraVMH1
Arcuate nucleuscontraArc1
Paraventricular hypothalamic nucleus parvicellular part [Periventricular zone anterior region]contraPaPc0
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]contraPaMP-0.5
Paraventricular hypothalamic nucleuscontraPa0.5
Border of the posterior magnocellular and medial parvocellular subdivision at mid-level of the rostrocaudal extentcontraPabPmmp-0.5
Paraventricular hypothalamic nucleus magnocellular division posterior part caudal levelcontraPaMagPC-0.5
Paraventricular hypothalamic nucleus dorsal parvocellular divisioncontraPavPoD-0.5
Paraventricular hypothalamic nucleus periventricular partcontraPapv-0.5
Paraventricular nucleus medial partcontraPame0.5
Retrochiasmatic areacontraRCh1.5
Submedius thalamic nucleus parvicellular partcontraSPFPC0
Reuniens thalamic nucleus lateral partcontraReL0.5
Reticular thalamic nucleus ventral partcontraRtV1
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5
Zona incertacontraZI0
Tuber cinereum areacontraTC1.5
Medial forebrain bundlecontramfb0
Amygdaloid complexcontraAC1
Basolateral amygdaloid nucleuscontraBL1
Basomedial amygdaloid nucleuscontraBM0.5
Bed nucleus of the stria terminaliscontraBST0.5
Bed nucleus of the stria terminalis lateral divisioncontraBSTL-0.5
Bed nucleus of the stria terminalis medial divisioncontraBSTM-0.5
Central amygdaloid nucleuscontraCe1
Central amygdaloid nucleus lateral divisioncontraCeL-1
Anterior amygdaloid areacontraAA0
Cortical amygdaloid nucleuscontraCAn1
Anterior cortical amygdaloid nucleuscontraACo-0.5
Medial amygdaloid nucleuscontraMe-0.5
Medial amygdaloid nucleus dorsal tipcontraMeDT-0.5
Accumbens nucleuscontraAc1
Ventromedial striatumcontraCPuvm1
HippocampuscontraHIPP-0.5
Subiculum ventral partcontraSv-0.5
Ventral hippocampuscontraHIPPv-0.5
Entorhinal cortexcontraEnt0
Anterior cingulate cortexcontraACC1
Cingulate cortex area 1contraCg1-0.5
Cingulate cortex area 2contraCg2-0.5
Prelimbic cortexcontraPrL2
Infralimbic cortexcontraIL2
Frontal cortex area 1contraFr12
Frontal cortex area 2 anterior partcontraFr2a2
Insular cortexcontraICX1
Dysgranular insular cortexcontraDI-0.5
Medial prefrontal cortexcontramPFC2
Medial agranular prefrontal cortexcontraAGm2
Medial orbital cortexcontraMO2
Ventral orbital cortexcontraVO2
Ventrolateral orbital areacontraVLO2
Septal regioncontraSER0
Lateral septal nucleus intermediate partcontraLSI0
Lateral septal nucleus ventral partcontraLSV0.5
Triangular septal nucleuscontraTS0
Cerebrospinal fluidipsicsf-1
Central grayipsiCG3
Central gray dorsal partipsiCGD2
Central gray lateral partipsiCGL2
Central grey caudal area ventral partipsicCGv2
Paralemniscal nucleusipsiPL3
Dorsolateral periaqueductal grayipsiDLPAG1
Lateral periaqueductal grayipsiLPAG2
Periaqueductal gray medial partipsiPAGm1
Ventrolateral periaqueductal grayipsiVLPAG0
Peduncularpontine nucleusipsiPPN0
Rostromedial tegmental nucleusipsiRMTg3
Substantia nigra compact partipsiSNC-0.5
Ventral tegmental area A10ipsiVTA3
A5 noradrenaline cellsipsiA50
Locus coeruleusipsiLC2
Mesencephalic reticular formationipsiMRF1
Pontine reticular nucleus oral part dorsal partipsiPnOd2
Dorsalmost part of the pontine reticular nucleus oral partipsiPnOdom-0.5
Parabrachial nucleus medialipsiPBnMe2
Nucleus of the solitary tractipsiSol3
Dorsal motor nucleus of vagusipsi10-0.5
Dorsal raphe nucleusipsiDR1.5
Central raphe nucleus dorsal partipsiCRNdp2
Medial raphe nucleusipsiMeR1
Raphe obscurus nucleusipsiROb1
Raphe pallidus nucleusipsiRPa1
Rostral ventrolateral medullaipsiRVLM-0.5
Inferior salivatory nucleusipsiIS0
Superior salivatory nucleusipsiSuS0
Basal forebrainipsiBAF3
Endopiriform systemipsiEnN2
Caudal endopiriform regionipsiCEn-0.5
Central endopiriform systemipsiCEnN-0.5
Dorsal endopiriform nucleusipsiDEn-0.5
Rostral endopiriform regionipsiREn-0.5
Diagonal band of BrocaipsiDBB2
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB2
Medial septal nucleusipsiMS4
Basal nucleus Meynert medial partipsiBmp2
Substantia innominataipsiSI2
Substantia innominata sublenticular partipsiSIS1
Substantia innominata caudoventral partipsiSICV-0.5
Preoptic regionipsiPREO3
Lateral preoptic areaipsiLPO2
Medial preoptic areaipsiMPA2
Medial preoptic nucleusipsiMPO2
Ventrolateral preoptic nucleusipsiVLPO1
Ventromedial preoptic nucleusipsiVMPO-0.5
Periventricular zone of the rostral half of the preoptic areaipsiPREOrpv-0.5
Tenia tectaipsiTT1
HypothalamusipsiHYPO1
Dorsomedial hypothalamic nucleusipsiDMHy-0.5
Dorsomedial hypothalamic nucleus non-compact partipsiDMHyncp1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC1
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR2
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR1.5
Lateral zoneipsiLHA1
Lateral hypothalamic areaipsiLH1.5
Lateral hypothalamic area caudal partipsiLHc2
Lateral hypothalamic area juxtadorsomedial regionipsiJDM1
Lateral hypothalamic area lateral partipsiLHAL3
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd1
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0.5
Lateral hypothalamic area perifornical partipsiPFx1.5
Lateroanterior hypothalamic nucleusipsiLAH-0.5
Ventrolateral hypothalamic nucleusipsiVLH-0.5
Anterior hypothalamic area posterior partipsiAHAP0.5
Anterior hypothalamic nucleus rostral zoneipsiAHnR1
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]ipsiDMrhc1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Posterior hypothalamic areaipsiPHA2
Posterior hypothalamic nucleusipsiPH1.5
Ventromedial hypothalamic nucleusipsiVMH3
Periventricular zoneipsiPVZ0
Arcuate nucleusipsiArc2
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR-0.5
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo0.5
Paraventricular hypothalamic nucleus parvicellular part [Periventricular zone anterior region]ipsiPaPc1
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP1
Paraventricular hypothalamic nucleus medial parvocellular partipsiMPPa-0.5
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag-0.5
Paraventricular hypothalamic nucleus magnocellular division posterior part caudal levelipsiPaMagPC2
Paraventricular hypothalamic nucleus dorsal parvocellular divisionipsiPavPoD2
Paraventricular nucleus medial parvocellular partipsiPaMep2
Paraventricular hypothalamic nucleus anterior parvicellular subdivisionipsiaPavPo1
Paraventricular hypothalamic nucleus periventricular partipsiPapv1
Paraventricular nucleus anterior partipsiPaan0.5
Paraventricular nucleus dorsal most portionipsiPaDom0.5
Paraventricular nucleus dorsal edgeipsiPaDoE0.5
Paraventricular nucleus medial partipsiPame-0.5
Paraventricular nucleus medial part at mid paraventricular hypothalamic nucleus levelipsiPamemi0.5
Paraventricular nucleus medial part at posterior paraventricular hypothalamic nucleus levelipsiPamepo0.5
Mid paraventricular hypothalamic nucleusipsiMiPa-0.5
Peri-paraventricular hypothalamic nucleusipsiPPa0.5
Border of the posterior magnocellular and medial parvocellular subdivision at mid-level of the rostrocaudal extentipsiPabPmmp2
Periventricular hypothalamic nucleusipsiPe2
Subparaventricular zone of the hypothalamusipsiSPa-0.5
Suprachiasmatic nucleusipsiSCh3
Supraoptic nucleus [Supraoptic region]ipsiSO1
Nucleus properipsiSOnP2
Premammillary nucleus ventral partipsiPMV0.5
Supramammillar nucleusipsiSuM3
Retrochiasmatic areaipsiRCh1.5
Dorsal thalamusipsiDOR-0.5
Parafascicular thalamic nucleusipsiPF-2
Mediodorsal thalamic nucleusipsiMD-0.5
Mediodorsal thalamic nucleus lateral partipsiMDL-1
Mediodorsal thalamic nucleus medial partipsiMDM-10
Submedius thalamic nucleus parvicellular partipsiSPFPC1
Midline group of the dorsal thalamusipsiMTN2.5
Reuniens thalamic nucleusipsiRe0.5
Reuniens thalamic nucleus lateral partipsiReL1.5
Subfornical organipsiSFO3
Reticular thalamic nucleusipsiRt1
Reticular thalamic nucleus medial partipsiRtm3
Reticular thalamic nucleus ventral partipsiRtV2.5
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Zona incertaipsiZI2.5
Zona incerta medial tipipsiZImt0.5
Tuber cinereum areaipsiTC2
Lateral habenular nucleusipsiLHb1
Pineal glandipsiPi2
Medial forebrain bundleipsimfb1
Amygdaloid complexipsiAC3
Basal nucleusipsiBnc2.5
Accessory basal nucleusipsiAB-1
Basal dorsal nucleusipsiBnD3
Basal nucleus anterior subdivisionipsiBncA2
Basal nucleus ventral divisonipsiBncV2
Basal nucleus ventral divison posterior partipsiBncVp-0.5
Basolateral amygdaloid nucleusipsiBL3
Anterior basolateral nucleusipsiBLA3
Basolateral nucleus medial portionipsiBLmp-0.5
Posterior basolateral nucleusipsiBLP-0.5
Ventral basolateral nucleusipsiBLV1.5
Basomedial amygdaloid nucleusipsiBM2
Anterior basomedial nucleusipsiBMA1
Posterior basomedial nucleusipsiBMP1.5
Caudal basal amygdaloid nucleusipsiBncc-3
Lateral amygdaloid nucleusipsiLA3
Anterior part of the lateral nucleusipsiLAa0.5
Dorsolateral part of the lateral nucleusipsiLaDL2
Posterior part of the lateral nucleusipsiLAP-0.5
Ventromedial part of the lateral nucleusipsiLaVM2
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis anterior dorsal areaipsiBSTAD3
Bed nucleus of the stria terminalis anterior lateral areaipsiBSTAL3
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM3
Bed nucleus of the stria terminalis caudal part caudoventral regionipsiBSTCacv1
Bed nucleus of the stria terminalis caudal part perifornical regionipsiBSTCapf1
Bed nucleus of the stria terminalis dorsolateral partipsiBSTDL3
Bed nucleus of the stria terminalis dorsomedial partipsiBSTDoM-0.5
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA-0.5
Bed nucleus of the stria terminalis lateral divisionipsiBSTL3
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV3
Bed nucleus of the stria terminalis medial divisionipsiBSTM3
Bed nucleus of the stria terminalis posterior divisionipsiBSTP2
Bed nucleus of the stria terminalis caudoventral partipsiBSTcv-0.5
Central amygdaloid nucleusipsiCe3
Central amygdaloid nucleus lateral divisionipsiCeL1
Central amygdaloid nucleus lateral division capsular partipsiCeC3
Central partipsiCeLc3
Central amygdaloid nucleus medial divisionipsiCeM3
Central amygdaloid nucleus rostral partipsiCerp2
Central amygdaloid nucleus ventral partipsiCeV-0.5
Interstitial nucleus of the posterior limb of the anterior commissureipsiIPAC1
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM1
Amygdalopiriform transition areaipsiAPir-0.5
Anterior amygdaloid areaipsiAA1
Cortical amygdaloid nucleusipsiCAn3
Anterior cortical amygdaloid nucleusipsiACo2.5
Posterolateral cortical nucleusipsiPLCo2
Medial amygdaloid nucleusipsiMe3
Medial amygdaloid nucleus dorsal tipipsiMeDT-0.5
Amygdalohippocampal areaipsiAHi-0.5
Subventricular nucleusipsiSV-0.5
ClaustrumipsiCl-0.5
Anterior part of the claustrumipsiACl1
Peripallidal regionipsiPePa2
Subpallidal regionipsiSuPa1
Ventral pallidumipsiVP3
StriatumipsiSTR0.5
Accumbens nucleusipsiAc3
Accumbens nucleus anterolateral partipsiAcAL2
Accumbens nucleus anteromedial partipsiAcAM3
Accumbens nucleus coreipsiAcbC1
Lateral coreipsiAcbCl2
Accumbens nucleus shellipsiAcbSh3
Cone like caudal dorsomedial extremity of the accumbens shellipsiAcbShco-1
Dorsomedial shellipsiAcbShdm-0.5
Lateral accumbens shellipsiAcbShl2
Medial accumbens shellipsiAcbShm1
Ventromedial shellipsiAcbShvm-0.5
Lateral nucleus accumbensipsiAcl1.5
Medial accumbensipsiAcbM3
Caudate putamenipsiCPu3
Caudal striatum matrix compartmentipsiCPucaMat3
Caudal striatum patch compartmentipsiCPucaStrio3
Caudate putamen caudolateral partipsiCPucl2
Dorsal striatumipsiCPud-0.5
Midventral striatumipsiCPumv-3
Striatal matrix compartmentipsiSMC-0.5
Striatal patch compartmentipsiSPC-0.5
Ventral striatumipsiCPuv2
Ventrolateral striatumipsiCPuvl-3
Ventromedial striatumipsiCPuvm2
Fundus of the striatumipsiFS-0.5
Cerebral cortexipsiCEC-0.5
HippocampusipsiHIPP3
Field CA1 of hippocampusipsiCA1-0.5
SubiculumipsiS1
Subiculum ventral partipsiSv-0.5
Posterior hippocampusipsiHIPPpo-0.5
Ventral hippocampusipsiHIPPv3
PresubiculumipsiPrS-0.5
ParasubiculumipsiPaS-0.5
Entorhinal cortexipsiEnt1
Lateral entorhinal cortexipsiLEnt2
Medial entorhinal cortexipsiMEnt-0.5
Piriform cortexipsiPir-0.5
Prepiriform cortexipsiPRPIR-0.5
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC-0.5
Cingulate cortex area 1ipsiCg1-0.5
Cingulate cortex area 1 caudal partipsiCg1c0
Cingulate cortex area 2ipsiCg2-0.5
Cingulate cortex area 2 caudal partipsiCg2c0
Cingulate cortex area 3ipsiCg31
Cingulumipsicg-0.5
Prelimbic cortexipsiPrL2
Prelimbic cortex layer 3ipsiPrLL31
Prelimbic cortex layer 4ipsiPrLL41
Prelimbic cortex layer 5ipsiPrLL51
Prelimbic cortex layer 6ipsiPrLL61
Prelimbic cortex ventral partipsiPrLv-0.5
Infralimbic areaipsiiLA2
Infralimbic cortexipsiIL3
Infralimbic cortex dorsal partipsiILD1
Infralimbic cortex layer 6ipsiILL61
Infralimbic cortex rostral partipsiILR1.5
Infralimbic cortex anterior part layer 5ipsiILAnL53
Infralimbic cortex anterior part layer 6ipsiILAnL63
Frontal association cortexipsiFrA-0.5
Frontal cortex area 2ipsiFr2-0.5
Insular cortexipsiICX3
Agranular insular cortexipsiAI3
Agranular insular cortex dorsal partipsiAID2
Agranular insular cortex dorsal part superficial layersipsiAIDsL0.5
Agranular insular cortex layer 1ipsiAIL11
Agranular insular cortex layer 3ipsiAIL32
Agranular insular cortex layer 4ipsiAIL42
Agranular insular cortex posterior partipsiAIP2
Caudal half of posterior agranular insular area in the ventral lip of rhinal sulcusipsiAIPchvL3
Dysgranular insular cortexipsiDI2
Granular insular cortexipsiGI2
Border region of the agranular and granular insular cortex ventral partipsiAGbGICXv3
Perirhinal cortexipsiA353
Prefrontal cortexipsiPFC3
Prefrontal cortex dorsomedial partipsiPFCdm2
Medial prefrontal cortexipsimPFC2
Medial prefrontal cortex layer 3ipsimPFCL32
Medial prefrontal cortex layer 4ipsimPFCL42
Medial prefrontal cortex layer 1ipsimPFCL12
Medial agranular prefrontal cortexipsiAGm-0.5
Secondary somatosensory cortexipsiS22
Anterior medial frontal cortexipsiAMFC1
Medial orbital cortexipsiMO1
Ventral orbital cortexipsiVO1
Ventrolateral orbital areaipsiVLO1
Ventrolateral orbital area posterior partipsiVLOp1
Interpeduncular nucleus rostral subnucleus central partipsiIPRce1
Olfactory bulb A16ipsiMOB-0.5
Anterior olfactory nucleusipsiAON1
Anterior olfactory nucleus medial partipsiAONm1
Olfactory tubercleipsiTuO3
Olfactory tubercle lateral partipsiTuOL1
Septal regionipsiSER2
Dorsal medial septumipsiDMS-1
Lateral septal nucleusipsiLS3
Lateral septal nucleus intermediate partipsiLSI1.5
Lateral septal nucleus rostral partipsiLSr3
Lateral septal nucleus ventral partipsiLSV3
Triangular septal nucleusipsiTS0
Ventral medial septumipsiVMSe3
Intermediolateral cell columnipsiIML-0.5
Thoracal segmentsipsiTSeg-0.5
Spinal cord layers T1ipsiSCLT12
Lumbar segment 6ipsiL62
Sacral segment 1ipsiSa12

Input from

NameSideAbbr.WeightDetails
Central graycontraCG1
Periaqueductal graycontraPAG-0.5
Ventral tegmental area A10contraVTA2
A10 ventrorostral dopamine groupcontraA10vr-0.5
A5 noradrenaline cellscontraA5-0.5
Locus coeruleuscontraLC3
Mesencephalic reticular formationcontraMRF1
Pontine reticular nucleus oral partcontraPnO1
Medullary reticular nucleus dorsal partcontraMdDd2
Intermediate hypothalamic cell groupscontraIHCG-0.5
Lateral preoptic areacontraLPO2
Medial preoptic areacontraMPA2
Medial preoptic nucleuscontraMPO-0.5
Dorsomedial hypothalamic nucleuscontraDMHy3
Lateral zonecontraLHA-0.5
Gemini hypothalamic nucleuscontraGem2
Lateral hypothalamic areacontraLH0.5
Lateral hypothalamic area perifornical partcontraPFx3
Lateral part of the lateral hypothalamic area perifornical partcontraPFxL2
Medial part of the lateral hypothalamic area perifornical partcontraPFxM3
Anterior hypothalamic areacontraAHA-0.5
Anterior hypothalamic area immediately caudal to the suprachiasmatic areacontraAHAcSCh-0.5
Anterior hypothalamic nucleuscontraAHn-2
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]contraDMrhc2
Dorsal hypothalamic areacontraDA3
Ventromedial hypothalamic nucleuscontraVMH-0.5
Ventromedial hypothalamic nucleus anterior partcontraVMHA1
Ventromedial hypothalamic nucleus central partcontraVMHC3
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL3
Arcuate nucleuscontraArc2
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contravPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAPav-0.5
Paraventricular hypothalamic nucleuscontraPa3
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleuscontraPVPapvA-0.5
Preoptic periventricular nucleuscontraPePO-0.5
Suprachiasmatic nucleuscontraSCh2
Suprachiasmatic nucleus dorsal divisioncontraSChd-0.5
Suprachiasmatic nucleus medial shellcontraSCnMDM-0.5
Suprachiasmatic nucleus lateral shell partcontraSCnLDM-0.5
Suprachiasmatic nucleus ventrolateral partcontraSCnVL-0.5
Region dorsal to suprachiasmatic nucleuscontraSChDT-0.5
Suprachiasmatic nucleus lateral shell regioncontraSChLS1
Suprachiasmatic nucleus core regioncontraSChCo0.5
Suprachiasmatic preoptic nucleuscontraPSCh-0.5
Premammillary nucleus dorsal partcontraPMD1
A11 dopamine cellscontraA11-0.5
A15contraA15-0.5
Tuberal cell group located in the arcuate nucleus and in the adjacent part of the periventricular nucleuscontraA12-0.5
Perifornical nucleuscontraPeF-0.5
Perifornical nucleus at the level of the paraventricular hypothalamic nucleus anterior parvicellular partcontraPeFLPaAP-0.5
Perifornical nucleus caudal to the paraventricular hypothalamic nucleus anterior parvicellular partcontraPeFCPaAP-0.5
Retrochiasmatic area immediately caudal to the suprarchiasmatic areacontraRChcSCh-0.5
Ventrobasal complexcontraVB0
Ventral part of reticular thalamic nucleus rostral partcontraRtrVe1.5
Caudal part of reticular thalamic nucleus ventromedial partcontraRtvmC1.5
Zona incertacontraZI3
Bed nucleus of the stria terminalis medial division posterior partcontraBSTMP-0.5
Central amygdaloid nucleuscontraCe0
Globus palliduscontraGP0.5
Parasubthalamic nucleuscontraPSTh3
Field CA1 of hippocampus ventral polecontraCA1vp-0.5
Subiculum ventral partcontraSv1
Infralimbic cortexcontraIL0
Cervical segment 1contraCS14
Cervical segment 2contraCS24
Cervical segment 3contraCS33
Cervical segment 4contraCS42
Cervical segment 5contraCS52
Cervical segment 6contraCS61
Cervical segment 7contraCS72
Cervical segment 8contraCS82
Thoracal segment 1contraT11
Thoracal segment 2contraT21
Thoracal segment 3contraT31
Thoracal segment 4contraT40.5
Thoracal segment 5contraT50.5
Thoracal segment 6contraT60.5
Thoracal segment 7contraT71
Thoracal segment 8contraT80.5
Thoracal segment 9contraT92
Thoracal segment 10contraT102
Thoracal segment 11contraT112
Thoracal segment 12contraT121
Thoracal segment 13contraT131
Lumbar segment 1contraL13
Lumbar segment 2contraL23
Lumbar segment 3contraL33
Lumbar segment 4contraL42
Lumbar segment 5contraL52
Lumbar segment 6contraL63
Sacral segment 1contraSa13
Sacral segment 2contraSa23
Sacral segment 3contraSa31
Sacral segment 4contraSa41
Coccygeal segment 1contraCo11
Coccygeal segment 2contraCo21
Coccygeal segment 3contraCo31
Central grayipsiCG3
Central gray dorsal partipsiCGD-0.5
Central gray lateral partipsiCGL-0.5
Central gray medial partipsiCGMe-0.5
Paralemniscal nucleusipsiPL3
Nucleus of DarkschewitschipsiDk-0.5
Periaqueductal grayipsiPAG0.5
Dorsolateral periaqueductal grayipsiDLPAG1
Dorsolateral periaqueductal gray caudal partipsiPAGdlc2
Dorsolateral periaqueductal gray rostral partipsiPAGdlr2
Periaqueductal gray caudal dorsolateral partipsiPAGLDC2
Periaqueductal gray rostrocaudal extentipsiPAGroe2
Ventral periaqueductal grayipsiVPAG1.5
Ventrolateral periaqueductal grayipsiVLPAG0.5
Ventrolateral periaqueductal gray caudal partipsiPAGvlc2
Periventricular gray matteripsiPVG1
Superior colliculusipsiSC-0.5
Peduncularpontine nucleusipsiPPN-0.5
Peduncularpontine nucleus caudal levelsipsiPPNCa-0.5
Substantia nigra compact partipsiSNC-0.5
Ventral tegmental area A10ipsiVTA3
A10 ventrorostral dopamine groupipsiA10vr-0.5
Lateral tegmental field retroambigual areaipsiLTfr-0.5
Laterodorsal tegmental nucleusipsiLDTg3
Dorsal tegmental nucleusipsiDTg1.5
Dorsal tegmental nucleus lateral partipsiDLTN-0.5
Pedunculopontine tegmental nucleusipsiPPTg2
Edinger Westphal nucleusipsiEW-0.5
Edinger Westphal nucleus rostral partipsiEWR1
Medial cerebellar nucleus dorsolateral protuberanceipsiMedDL-0.5
A5 noradrenaline cellsipsiA5-0.5
Barringtons nucleusipsiBar2
Locus coeruleusipsiLC2
Prelocus coeruleus nucleusipsiPLC3
Nucleus incertus pars compactaipsiNIc1
Nucleus incertus pars dissipataipsiNId1
Parapyramidal nucleusipsiPPy-0.5
Reticular systemipsiRF-0.5
Rostroventrolateral reticular nucleusipsiRVL-0.5
Mesencephalic reticular formationipsiMRF3
Deep mesencephalic nucleusipsiDpMe1
Pontine reticular nucleus oral partipsiPnO3
Pontomesencephalic reticular formationipsiPMRF-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Cuneiforme nucleusipsiCnF-0.5
Parabrachial nucleusipsiPB2
Lateral parabrachial nucleusipsiLPB2
Lateral parabrachial nucleus external part inner portionipsiLPBEip0.5
Parabrachial nucleus central lateral partipsiPBCeL2
Parabrachial nucleus dorsal partipsiPBD3
Dorsal lateral parabrachial nucleusipsiPBDoL2
Parabrachial nucleus dorsolateral partipsiPBDL2
Parabrachial nucleus external divison lateral partipsiPBeDL2
Parabrachial nucleus medialipsiPBnMe-0.5
Parabrachial nucleus ventral partipsiPBV3
Gigantocellular reticular nucleusipsiGi1
Medullary reticular nucleus ventral partipsiMdV-0.5
Medullary reticular nucleus ventrolateral part rostral partipsiMdVLR2
Subcoeruleus nucleus dorsal partipsiSubCD2
C1 adrenaline cellsipsiC1-0.5
Nucleus of the solitary tractipsiSol3
Nucleus of the solitary tract caudal partipsiSolca2
Caudal nucleus of the solitary tract medial partipsiSolcame2
Nucleus of the solitary tract commissural partipsiSolC2
Nucleus of the solitary tract medial partipsiSolM2
Nucleus of the solitary tract rostral partipsiSolro1
Parasolitary nucleusipsiPSol3
Dorsal motor nucleus of vagusipsi103
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR2
Dorsal raphe nucleus rostral partipsiDRr3
Rostral linear nucleus of the rapheipsiRLi-0.5
Median raphe nucleusipsiMnR1.5
Pontine raphe nucleusipsiPnR2
Raphe magnus nucleusipsiRMg3
Raphe magnus nucleus rostral partipsiRMgR1
Raphe obscurus nucleusipsiROb3
Raphe pallidus nucleusipsiRPa1
Caudal ventrolateral medullaipsiCVLM2
Rostral ventrolateral medullaipsiRVLM1
A1 noradrenergic cellsipsiA1-0.5
Diagonal band of BrocaipsiDBB1
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Nucleus of the vertical limb of the diagonal bandipsiVDB2
Medial septal nucleusipsiMS3
Substantia innominataipsiSI3
Preoptic regionipsiPREO2
Intermediate hypothalamic cell groupsipsiIHCG2.5
Lateral preoptic areaipsiLPO3
Medial preoptic areaipsiMPA3
Medial preoptic area rostral partipsiMPAR2
Medial preoptic area dorsolateral partipsiMPADL3
Medial preoptic nucleusipsiMPO2
Median preoptic nucleusipsiMnPO3
Ventrolateral preoptic nucleusipsiVLPO1
Tenia tectaipsiTT-0.5
Tuberomammillar systemipsiTMS-0.5
Tuberomammillary nucleusipsiTuM3
Dorsal cap of the vascular organ of the lamina terminalisipsiVOLTdc3
Lateral aspect of the vascular organ of the lamina terminalisipsiLVOLT3
HypothalamusipsiHYPO-0.5
Dorsomedial hypothalamic nucleusipsiDMHy2
Caudal part of the dorsomedial hypothalamic nucleusipsiDMHyC-0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC2
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR2
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar2
Lateral hypothalamic area posterior part [Preoptic anterior region]ipsiLHApPAR2
Lateral hypothalamic area premammillary subfornical region [Preoptic anterior region]ipsiLHAsfp2
Lateral zoneipsiLHA2
Gemini hypothalamic nucleusipsiGem2
Lateral hypothalamic areaipsiLH4
Lateral hypothalamic area juxtadorsomedial regionipsiJDM3
Lateral hypothalamic area motor related juxtaventromedial regionipsiLHAjvm2
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd3
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv2
Lateral hypothalamic area subfornical region anterior zoneipsiLHAsfa1
Lateral hypothalamic area perifornical partipsiPFx4
Lateral part of the lateral hypothalamic area perifornical partipsiPFxL2
Medial part of the lateral hypothalamic area perifornical partipsiPFxM3
Lateral hypothalamic area posterior partipsiLHAp2
Tuberal division of the lateral hypothalamic area posterolateral partipsiLHTCPL-0.5
Tuberal division of the lateral hypothalamic area medial partipsiLHTCM-0.5
Ventrolateral hypothalamic nucleusipsiVLH-0.5
Medial zoneipsiMHA-0.5
Anterior hypothalamic areaipsiAHA3
Anterior hypothalamic area central partipsiAHAC-2
Anterior hypothalamic area posterior partipsiAHAP-2
Anterior hypothalamic nucleus ventromedial partipsiAHAvm3
Anterior hypothalamic area immediately caudal to the suprachiasmatic areaipsiAHAcSCh4
Anterior hypothalamic nucleusipsiAHn-2
Anterior part of the anterior hypothalamic nucleusipsiAHna-2
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]ipsiDMrhc2
Dorsal hypothalamic areaipsiDA3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM4
Lateral region of the compact part of the dorsomedial hypothalamic nucleusipsiDMCL3
Dorsomedial hypothalamic nucleus dorsal partipsiDMD3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM4
Posterior hypothalamic areaipsiPHA4
Posterior hypothalamic nucleusipsiPH1
Posterior hypothalamic nucleus rostral partipsiPHRo-0.5
Subparaventricular zoneipsiSuPZ3
Subparaventricular zone dorsomedial partipsiSuPZdm1
Tuberal areaipsiTA1
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus anterior partipsiVMHA2
Ventromedial hypothalamic nucleus central partipsiVMHC4
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM-0.5
Ventromedial hypothalamic nucleus posterior partipsiVMHP-0.5
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL4
Periventricular zoneipsiPVZ-0.5
Arcuate nucleusipsiArc3
Arcuate nucleus lateral partipsiArcL3
Arcuate nucleus medial partipsiArcM3
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR1
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP-0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsivPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAPav-0.5
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo-0.5
Paraventricular hypothalamic nucleus periventricular partipsiPapv3
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleusipsiPVPapvA-0.5
Paraventricular hypothalamic nucleus surrounding regionipsiPaSurr3
Periventricular hypothalamic nucleusipsiPe2
Periventricular hypothalamic nucleus ventral partipsiPeV2
Preoptic periventricular nucleusipsiPePO3
Subparaventricular zone of the hypothalamus perisuprachiasmatic regionipsiSBPVps4
Suprachiasmatic nucleusipsiSCh3
Suprachiasmatic nucleus dorsal divisionipsiSChd4
Suprachiasmatic nucleus dorsomedial partipsiSCnDM4
Suprachiasmatic nucleus medial shellipsiSCnMDM3
Suprachiasmatic nucleus lateral shell partipsiSCnLDM3
Suprachiasmatic nucleus perinuclear zoneipsiSChpnz3
Suprachiasmatic nucleus ventral divisionipsiSChv2
Suprachiasmatic nucleus ventrolateral partipsiSCnVL4
Region dorsal to suprachiasmatic nucleusipsiSChDT4
Suprachiasmatic nucleus lateral shell regionipsiSChLS3
Suprachiasmatic nucleus core regionipsiSChCo1.5
Suprachiasmatic preoptic nucleusipsiPSCh3
Supraoptic hypothalamic partipsiSOHYP0
Incerto hypothalamic areaipsiicHYPO1
Lateral mammillary nucleusipsiLM3
Medial mammillary nucleusipsiMMn3
Medial mammillary nucleus median partipsiMMnm3
Premammillary nucleus dorsal partipsiPMD2
Premammillary nucleus ventral partipsiPMV1
Supramammillar nucleusipsiSuM1
A11 dopamine cellsipsiA11-0.5
A13 dopamine cellsipsiA133
A15ipsiA15-0.5
A8 dopamine cells retrorubral groupipsiRRF3
Tuberal cell group located in the arcuate nucleus and in the adjacent part of the periventricular nucleusipsiA12-0.5
Perifornical nucleusipsiPeF3
Perifornical nucleus medial partipsiPeFM-2
Perifornical nucleus at the level of the paraventricular hypothalamic nucleus anterior parvicellular partipsiPeFLPaAP-0.5
Perifornical nucleus caudal to the paraventricular hypothalamic nucleus anterior parvicellular partipsiPeFCPaAP-0.5
Retrochiasmatic areaipsiRCh-0.5
Basal retrochiasmatic areaipsiBRCh1
Retrochiasmatic area lateral partipsiRChL-2
Retrochiasmatic area immediately caudal to the suprarchiasmatic areaipsiRChcSCh4
Mediodorsal thalamic nucleusipsiMD-0.5
Intermediodorsal thalamic nucleusipsiIMD1
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleus anterior partipsiPVA1
Paraventricular thalamic nucleus posterior partipsiPVP0
Reuniens thalamic nucleusipsiRe2
Subfornical organipsiSFO-2
Outer part of the subfornical organipsiSFOO3
Ventrobasal complexipsiVB2
Ventromedial thalamic nucleusipsiVM-0.5
Medial thalamic zoneipsiMTZ-2
Reticular thalamic nucleusipsiRt3
Reticular thalamic nucleus anterior partipsiRtA3
Reticular thalamic nucleus medial partipsiRtm3
Reticular thalamic nucleus rostroventral partipsiRtrv3
Reticular thalamic nucleus ventral partipsiRtV3
Reticular thalamic nucleus ventromedial partipsiRtvm2
Subparafascicular thalamic nucleusipsiSPF2
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Zona incertaipsiZI3
Zona incerta rostromedial partipsiZIrm2
Lateral habenular nucleusipsiLHb2
Pretectal regionipsiPRT1
Amygdaloid complexipsiAC2
Basolateral amygdaloid nucleusipsiBL1
Basomedial amygdaloid nucleusipsiBM1
Anterior basomedial nucleusipsiBMA0.5
Posterior basomedial nucleusipsiBMP0.5
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis anterior division dorsomedial nucleusipsiBSTdm3
Bed nucleus of the stria terminalis anterior dorsal areaipsiBSTAD3
Bed nucleus of the stria terminalis anterior lateral areaipsiBSTAL2
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM2
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV1
Bed nucleus of the stria terminalis fusiform partipsiFu3
Bed nucleus of the stria terminalis magnocellular nucleusipsiBSTmc2
Bed nucleus of the stria terminalis oval nucleusipsiBSTo-10
Bed nucleus of the stria terminalis lateral divisionipsiBSTL-1
Bed nucleus of the stria terminalis lateral division dorsal partipsiBSTLD-0.5
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV-0.5
Bed nucleus of the stria terminalis medial divisionipsiBSTM-0.5
Bed nucleus of the stria terminalis medial division posterior partipsiBSTMP-0.5
Bed nucleus of the stria terminalis ventral tipipsiBNSTvt3
Central amygdaloid nucleusipsiCe2.5
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM1
Anterior amygdaloid areaipsiAA1
Anterior cortical amygdaloid nucleusipsiACo2
Posterior amygdaloid nucleusipsiCOAp0.5
Posterolateral cortical nucleusipsiPLCo-0.5
Medial amygdaloid nucleusipsiMe2
Amygdalohippocampal areaipsiAHi2
ClaustrumipsiCl3
Anterior part of the claustrumipsiACl2
Medial part of claustrumipsiMCl3
Globus pallidusipsiGP2
Medial globus pallidusipsiMGP2.5
Peripallidal regionipsiPePa3
Subpallidal regionipsiSuPa2
Ventral pallidumipsiVP3
Small cells of the globus pallidusipsiGPsc1
Accumbens nucleusipsiAc3
Accumbens nucleus coreipsiAcbC-0.5
Accumbens nucleus shellipsiAcbSh1
Parasubthalamic nucleusipsiPSTh1
Subthalamic nucleus medial partipsiSThM1
Subthalamic nucleus medial capipsiSThMc1
HippocampusipsiHIPP-0.5
Ammon hornipsiAmH0
Field CA1 of hippocampus ventral poleipsiCA1vp0.5
SubiculumipsiS-0.5
Subiculum dorsal partipsiSd2
Subiculum ventral partipsiSv3
Subiculum ventral distal partipsiSvd1
Subiculum ventral part superficial partipsiSvS2
Subiculum ventral proximal partipsiSvp1
Subiculum ventral part polymorph layeripsiSvPM1
Subiculum ventral part deep layersipsiSvDL2
Presubiculum deep layersipsiPrSDL2
Lateral entorhinal cortexipsiLEnt1
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC3
Cingulate cortex area 1 caudal partipsiCg1c0.5
Cingulate cortex area 2 caudal partipsiCg2c0.5
Ventral anterior cingulate cortexipsiVACC3
Dorsal cingulate cortexipsiDCC3
Posterior cingulate cortexipsiPCC0
Prelimbic cortexipsiPrL3
Prelimbic cortex dorsal partipsiPrLd1.5
Prelimbic cortex layer 5ipsiPrLL5-0.5
Prelimbic cortex layer 6ipsiPrLL63
Prelimbic cortex ventral partipsiPrLv1.5
Infralimbic areaipsiiLA2
Infralimbic cortexipsiIL3
Infralimbic cortex layer 5ipsiILL5-0.5
Infralimbic cortex layer 6ipsiILL61
Infralimbic cortex rostral partipsiILR1.5
Frontal cortex area 2ipsiFr20.5
Insular cortexipsiICX-0.5
Agranular insular cortex anterior partipsiAIA1
Agranular insular cortex posterior partipsiAIP-0.5
Agranular insular cortex posterior part pressor siteipsiAIPp1
Agranular insular cortex ventral partipsiAIV2
Insular cortex layer 5ipsiICXL5-0.5
Medial insular cortexipsiICXM3
Dorsal peduncular cortexipsiDP1
Prefrontal cortexipsiPFC-0.5
Lateral agranular prefrontal cortexipsiAGl-0.5
Medial prefrontal cortexipsimPFC-0.5
Medial prefrontal cortex layer 5ipsimPFCL53
Medial prefrontal cortex layer 6ipsimPFCL63
Medial agranular prefrontal cortexipsiAGm2
Primary somatosensory cortexipsiS11
Lateral orbital cortexipsiLO2
Medial orbital cortexipsiMO1
Ventral orbital cortexipsiVO0
Intergeniculate leafipsiIGL-0.5
Ventral lateral geniculate nucleusipsiVLG1
Olfactory nucleiipsiONn1
Anterior olfactory nucleus medial partipsiAONm-0.5
Olfactory tubercleipsiTuO1
Septal regionipsiSER3
Lateral septal nucleusipsiLS1
Lateral septal nucleus dorsal partipsiLSD-2
Lateral septal nucleus intermediate partipsiLSI-2
Ventrally lateral septal nucleus rostral part medial zoneipsiLSrmV2
Lateral septal nucleus ventral partipsiLSV3
Anteroposterior extension of the lateral septal nucleusipsiLSap-2
Ventroposterior extension of the lateral septal nucleusipsiLSvp-2
Septofimbrial nucleusipsiSFi1
Septohypothalamic nucleusipsiSHy-0.5
Ventral medial septumipsiVMSe2
Spinal cordipsiMES2
Thoracal segment 6ipsiT60.5
Thoracal segment 7ipsiT70.5
Thoracal segment 8ipsiT80.5
Thoracal segment 9ipsiT90.5
Lumbar segment 6ipsiL61
Stomach wallipsiOrgsStomWS-10
Trachea sideipsiOrgsTras2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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