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Rat connectome



Infralimbic cortex layer 3 left


Abbreviation
ILL3
Color       
Superior regionsInfralimbic cortex intermediate layers

SynonymsAbbr.Language
Infralimbic cortex layer 3ILL3 

Output to

NameSideAbbr.WeightDetails
Ventral tegmental area A10ipsiVTA-0.5
Dorsal raphe nucleusipsiDR3
Tenia tectaipsiTT-0.5
Mediodorsal thalamic nucleusipsiMD0.5
Mediodorsal thalamic nucleus central partipsiMDC1
Mediodorsal thalamic nucleus lateral partipsiMDL1
Mediodorsal thalamic nucleus medial partipsiMDM1
Amygdaloid complexipsiAC0.5
Basolateral amygdaloid nucleusipsiBL3
Basomedial amygdaloid nucleusipsiBM1
Lateral amygdaloid nucleusipsiLA-0.5
Bed nucleus of the stria terminalis ventral partipsiBNSTv3
Amygdalostriatal transition areaipsiAStr2
Accumbens nucleusipsiAc2
Anterior accumbensipsiAcbA1
Dorsal accumbensipsiAcbD1
Ventromedial accumbensipsiAcbVM2
Fundus of the striatumipsiFS1
Presubiculum deep layersipsiPrSDL1
Parasubiculum deep layersipsiPaSDL1
Entorhinal cortexipsiEnt3
Dorsal intermediate entorhinal cortex deep layersipsiDIEntdL1
Medial entorhinal cortex layer 2ipsiMEntLyL21
Medial entorhinal cortex layer 3ipsiMEntLyL31
Medial entorhinal cortex deep layersipsiMEntDLy1
Caudal entorhinal field 1 deep layersipsiCEnt1dL1
Ventral intermediate entorhinal cortex layer 2ipsiVIEntL21
Ventral intermediate entorhinal cortex layer 3ipsiVIEntL31
Ventral intermediate entorhinal cortex deep layersipsiVIEntdL3
Retrosplenial dorsalipsiRSd0
Retrosplenial ventral partipsiRSPv0
Dorsal anterior cingulate cortex layer 5ipsiDACCL50.5
Dorsal anterior cingulate cortex layer 6ipsiDACCL60.5
Ventral anterior cingulate cortex layer 1ipsiVACCL10.5
Ventral anterior cingulate cortex layer 2ipsiVACCL20.5
Ventral anterior cingulate cortex layer 3ipsiVACCL30.5
Ventral anterior cingulate cortex layer 5ipsiVACCL50.5
Prelimbic cortexipsiPrL-0.5
Prelimbic cortex layer 1ipsiPrLL12
Prelimbic cortex layer 2ipsiPrLL20.5
Prelimbic cortex layer 3ipsiPrLL32
Prelimbic cortex layer 5ipsiPrLL52
Prelimbic cortex layer 6ipsiPrLL60.5
Infralimbic cortexipsiIL3
Infralimbic cortex layer 1ipsiILL12
Infralimbic cortex layer 2ipsiILL22
Infralimbic cortex layer 5ipsiILL52
Infralimbic cortex layer 6ipsiILL62
Infralimbic cortex layer 3ipsiILL32
Infralimbic cortex layer 4ipsiILL42
Infralimbic cortex rostral partipsiILR2.5
Perirhinal cortexipsiA354
Perirhinal cortex layer 1ipsiA35L12.5
Perirhinal cortex layer 2ipsiA35L22.5
Perirhinal cortex layer 3ipsiA35L32.5
Ectorhinal cortexipsiA363
Ectorhinal cortex layer 1ipsiA36L11.5
Postrhinal cortexipsiPOR2
Postrhinal cortex layer 1ipsiPORL11
Olfactory tubercle medial partipsiTuOMP3
Dorsal raphe nucleuscontraDR3
Mediodorsal thalamic nucleus central partcontraMDC1
Mediodorsal thalamic nucleus lateral partcontraMDL2
Mediodorsal thalamic nucleus medial partcontraMDM1
Anterior accumbenscontraAcbA0.5
Presubiculum deep layerscontraPrSDL1
Parasubiculum deep layerscontraPaSDL1
Dorsal intermediate entorhinal cortex deep layerscontraDIEntdL1
Medial entorhinal cortex layer 2contraMEntLyL21
Medial entorhinal cortex layer 3contraMEntLyL31
Medial entorhinal cortex deep layerscontraMEntDLy1
Caudal entorhinal field 1 deep layerscontraCEnt1dL1
Ventral intermediate entorhinal cortex layer 2contraVIEntL21
Ventral intermediate entorhinal cortex layer 3contraVIEntL31
Ventral intermediate entorhinal cortex deep layerscontraVIEntdL3
Infralimbic cortexcontraIL2
Infralimbic cortex rostral partcontraILR2.5
Perirhinal cortex layer 1contraA35L12.5
Perirhinal cortex layer 2contraA35L22.5
Perirhinal cortex layer 3contraA35L32.5
Ectorhinal cortex layer 1contraA36L11.5
Postrhinal cortex layer 1contraPORL11

Input from

NameSideAbbr.WeightDetails
Centrolateral thalamic nucleusipsiCL-0.5
Paracentral thalamic nucleusipsiPC-0.5
Intermediodorsal thalamic nucleusipsiIMD2
Mediodorsal thalamic nucleus caudal two thirdsipsiMDCtt-0.5
Paratenial thalamic nucleusipsiPT2
Reuniens thalamic nucleusipsiRe-0.5
Subfornical organipsiSFO1
Lateral habenular nucleusipsiLHb-0.5
Basal nucleusipsiBnc-0.5
Anterior basolateral nucleusipsiBLA-0.5
Anterior basomedial nucleusipsiBMA0.5
Posterior basomedial nucleusipsiBMP2
Lateral amygdaloid nucleusipsiLA-0.5
Bed nucleus of the stria terminalisipsiBST-0.5
Central amygdaloid nucleusipsiCe-0.5
Anterior amygdaloid areaipsiAA-0.5
Anterior cortical amygdaloid nucleusipsiACo1
Medial amygdaloid nucleusipsiMe-0.5
Field CA1 of hippocampusipsiCA12
Mid-rostral level of dorsolateral entorhinal cortex layer 4ipsiDLEntMrL42
Mid-rostral level of dorsolateral entorhinal cortex layer 5ipsiDLEntMrL52
Mid-rostral level of dorsolateral entorhinal cortex layer 6ipsiDLEntMrL62
Prelimbic cortexipsiPrL0.5
Prelimbic cortex layer 2ipsiPrLL22
Prelimbic cortex layer 3ipsiPrLL32
Infralimbic cortexipsiIL1.5
Infralimbic cortex layer 1ipsiILL12
Infralimbic cortex layer 2ipsiILL22
Infralimbic cortex layer 5ipsiILL52
Infralimbic cortex layer 5bipsiILL5b-2
Infralimbic cortex layer 6ipsiILL62
Infralimbic cortex layer 3ipsiILL32
Infralimbic cortex layer 4ipsiILL42
Agranular insular cortex dorsal partipsiAID3
Superficial layers of the posterior part of the agranular insular cortexipsiAIPsL0.5
Agranular insular cortex posterior part layer 5ipsiAIPL52
Agranular insular cortex posterior part layer 6ipsiAIPL61
Insular cortex posterior partipsiICXpo3
Perirhinal cortexipsiA354
Perirhinal cortex midportion layer 4ipsiPRhMiL43
Perirhinal cortex midportion layer 5ipsiPRhMiL53
Perirhinal cortex midportion layer 6ipsiPRhMiL63
Perirhinal cortex rostral part layer 4ipsiPRroL43
Perirhinal cortex rostral part layer 5ipsiPRroL53
Perirhinal cortex rostral part layer 6ipsiPRroL63
Ectorhinal cortexipsiA364
Postrhinal cortexipsiPOR1
Prelimbic cortexcontraPrL0.5
Infralimbic cortexcontraIL1
Superficial layers of the posterior part of the agranular insular cortexcontraAIPsL0.5
Agranular insular cortex posterior part layer 5contraAIPL51
Agranular insular cortex posterior part layer 6contraAIPL60.5
Perirhinal cortexcontraA350.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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