University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Tongue left


Abbreviation
OrgOCT
Color       
Superior regionsOral cavity

SynonymsAbbr.Language
TongueOrgOCTEng

SubregionsSide
Anterior portion of the tongueleft
Intralingual glands in the tongueleft
Root of the tongueleft
Tongue musculatureleft
Ventrolateral tongue musculatureleft
Region close to the intramolar eminence of the tongueleft
Tip of the tongueleft
Posterior portion of the tongueleft
Intermediate one-third of the tongueleft
Rapid adaptors of the lingual mucosaleft
Middle third of the tongueleft
Fungiforme papillaeleft
Filiform papillaeleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG-10
Red nucleusipsiR-10
Central tegmental fieldipsiTGAC-10
Substantia nigra compact partipsiSNC-10
Substantia nigra lateral partipsiSNL-10
Substantia nigra reticular partipsiSNR-10
Laterodorsal tegmental nucleusipsiLDTg-10
Ventral tegmental nucleusipsiVTg-10
Pedunculopontine tegmental nucleusipsiPPTg-10
Subtegmental nucleusipsiSubT-10
A5 noradrenaline cellsipsiA5-10
Locus coeruleusipsiLC-10
Nucleus of Probsts bundleipsiNPB-10
Pontine nuclei caudal partipsiBPNc-10
Pontine nucleus oralisipsiPnOr-10
Pontine nucleus ventral partipsiBPNv-10
Prepositus nucleusipsiPr-10
Paramedian reticular nucleusipsiPMn-10
Cuneiforme nucleusipsiCnF-10
Koelliker Fuse nucleusipsiKF-10
Lateral parabrachial nucleusipsiLPB-10
Parabrachial nucleus medialipsiPBnMe-10
Gigantocellular reticular nucleusipsiGi-10
Gigantocellular reticular nucleus alpha partipsiGiA-10
Gigantocellular reticular nucleus ventral partipsiGiV-10
Lateral reticular nucleusipsiLRt-10
Medullary reticular nucleus dorsal partipsiMdDd-10
Medullary reticular nucleus ventral partipsiMdV-10
Parvicellular reticular nucleusipsiPCRt-10
Subcoeruleus nucleusipsiSubC-10
Area postremaipsiAP-0.5
Facial nucleusipsi7-10
Glossopharyngeal nerveipsi9n-2
Hypoglossal motor nucleusipsi12M-10
Caudal part of the hypoglossal nucleusipsi12SC1
Intertrigeminal nucleusipsiI5-10
Paratrigeminal nucleusipsiPa53
Supratrigeminal nucleusipsiSu5-10
Mesencephalic trigeminal nucleusipsiMe5-10
Motor trigeminal nucleusipsiMo5-10
Principal sensory trigeminal nucleusipsiPr5-10
Spinal trigeminal nucleusipsiSp5nc3
Spinal trigeminal nucleus caudal partipsiSp5C-10
Spinal trigeminal nucleus dorsal partipsiSp5ncD-2
Spinal trigeminal nucleus interpolar partipsiSp5I-10
Spinal trigeminal nucleus interpolar part dorsomedial marginal zoneipsiSp5Idm3
Spinal trigeminal nucleus oral partipsiSp5O-10
Dorsomedial portion of the spinal trigeminal nucleus oral partipsiSp5ODM2
Trigeminal ganglionipsi5Gn3
Nucleus of the solitary tractipsiSol3
Nucleus of the solitary tract intermediate partipsiSolIM-0.5
Nucleus of the solitary tract intermediate part interstitial subdivisionipsiSoliIS1
Nucleus of the solitary tract intermediate part lateral subdivisionipsiSolIML3
Nucleus of the solitary tract medial partipsiSolM-0.5
Nucleus of the solitary tract medial part lateral zoneipsiSolML-2
Nucleus of the solitary tract midrostral partipsiSolmr-0.5
Nucleus of the solitary tract rostrolateral partipsiSolRL3
Nucleus of the solitary tract ventral partipsiSolV-0.5
Nucleus of the solitary tract ventrolateral partipsiSolVL-0.5
Dorsal raphe nucleusipsiDR-10
Raphe magnus nucleusipsiRMg-10
Raphe pallidus nucleusipsiRPa-10
Rostral ventrolateral medullaipsiRVLM-10
Caudal interstitial nucleus of the medial longitudinal fasciculusipsiCI-10
Dorsal paragigantocellular nucleusipsiDPGi-10
Lateral paragigantocellular nucleusipsiLPGi-10
Dorsal root ganglion C2ipsiDRGC2-2
Dorsal root ganglion C3ipsiDRGC3-2
Glossopharyngeal nervecontra9n-2
Spinal trigeminal nucleuscontraSp5nc3

Input from

NameSideAbbr.WeightDetails
Pontine reticular nucleusipsiPRN-0.5
Facial nucleus medial partipsi7M-0.5
Hypoglossal nucleusipsi12S3
Hypoglossal motor nucleusipsi12M-0.5
Ventrolateral hypoglossal nucleusipsi12SVL-0.5
Hypoglossal nucleus ventral partipsi12SV3
Medial subcompartment of the ventral compartment of the hypoglossal nucleusipsi12SVm1
Lateral accessory subcompartment of the ventral hypoglossal nucleusipsi12SVLA0
Lateral subcompartment of the ventral compartment of the hypoglossal nucleusipsi12SVLsc3
Centromedial subgroup of the ventral compartment of the hypoglossal nucleusipsi12SVcm-0.5
Hypoglossal nucleus dorsolateral partipsi12SDL-0.5
Dorsal part of the hypoglossal nucleusipsi12SD3
Caudal one-third of the hypoglossal nucleusipsi12SCot-0.5
Dorsomedial subdivision of the hypoglossal nucleusipsi12DM-0.5
Hypoglossal nucleus motor neuronipsi12Sprinmn3
Ventromedial subnucleus of the hypoglossal nucleusipsi12Sprinvm-0.5
Hypoglossal nucleus lateral partipsi12SL-0.5
Inferior salivatory nucleusipsiIS3
Superior salivatory nucleusipsiSuS3
Hypoglossal nucleuscontra12S-0.5
Hypoglossal nucleus ventral partcontra12SV1
Dorsal part of the hypoglossal nucleuscontra12SD1
Superior cervical ganglionipsiAutoSCeG2
Nodose ganglionipsiAutoNoG-0.5
Hypoglossal nerveipsi12P3
Medial division of the hypoglossal nerveipsi12Pmd-0.5
Lateral divison of the hypoglossal nerveipsi12PLd-0.5
Hypoglossal nervecontra12P-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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