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Rat connectome



Nucleus of the solitary tract intermediate part left


Abbreviation
SolIM
Color       
Superior regionsNucleus of the solitary tract

SynonymsAbbr.Language
Intermediate subnucleus of the solitary tractSoliM 
Intermediate nucleus of the solitary tract Eng
Intermediate part of the nucleus of the solitary tract Eng
Nucleus of the solitary tract intermedialis part Eng
Nucleus of the solitary tract intermediate partSolIMEng
Intermediate part of the nucleus of the tractus solitarius Eng
 iNTSEng

SubregionsSide
Nucleus of the solitary tract intermediate part dorsomedial subdivisionleft
Nucleus of the solitary tract intermediate part interstitial subdivisionleft
Nucleus of the solitary tract intermediate part medial zoneleft
Nucleus of the solitary tract intermediate part parvicellular subdivisionleft
Nucleus of the solitary tract intermediate part ventrolateral subdivisionleft
Area surrounding the intermediate subnucleus of the solitary tractleft
Nucleus of the solitary tract intermediate part lateral subdivisionleft
Dorsal half of the intermediate nucleus of the solitary tractleft
Intermediate nucleus of the solitary tract caudal to area postremaleft
Nucleus of the solitary tract intermediate part intermediate subdivisionleft
Intermediate nucleus of the solitary tract rostral to the area postremaleft
Rostral dorsal part of the intermediate subnucleus of the solitary tractleft
Dorsal part of the intermediate subnucleus of the solitary tractleft
Caudal dorsal part of the intermediate subnucleus of the nucleus of the solitary tractleft
Rostral intermediate nucleus of the solitary tractleft
Intermediate nucleus of the solitary tract middle levelleft

Output to

NameSideAbbr.WeightDetails
Ventrolateral tegmental areaipsiVLTg-0.5
Lateral tegmental field retroambigual areaipsiLTfr-0.5
Medullary tegmentumipsiTGM-0.5
Ventral medullary tegmentumipsiVMTGA1
Dorsolateral medullary tegmentumipsiDLTGM-0.5
PonsipsiP3
Locus coeruleusipsiLC3
Intermediate reticular nucleus alpha partipsiIRtA2
Parabrachial nucleusipsiPB3
Koelliker Fuse nucleusipsiKF3
Parabrachial nucleus central lateral partipsiPBCeL3
Parabrachial nucleus dorsal partipsiPBD-0.5
Parabrachial nucleus external divison lateral partipsiPBeDL-0.5
Central part of the medial parabrachial nucleusipsiPBnCMe3
Parabrachial nucleus rostral partipsiPBro3
Parabrachial nucleus ventrolateral partipsiPBveLa3
Ventromedial aspect of the parabrachial nucleusipsiPBvm3
Lateral reticular nucleusipsiLRt2
Lateral reticular nucleus surrounding nucleus ambiguusipsiLRtsamb3
Lateral reticular formation between nucleus ambiguus and Nucleus of the solitary tractipsiLRtbambSol3
Parvicellular reticular nucleusipsiPCRt2
Medulla oblongataipsiMeOb3
C1 adrenaline cellsipsiC1-0.5
Lateral C1 cell groupipsiC1L-0.5
C2 adrenaline cellsipsiC2-0.5
Ambiguus nucleusipsiAmb2
Ambiguus nucleus caudal partipsiAmbc3
Ambiguus nucleus compact partipsiAmbC3
Rostral portion of the ambiguus nucleus compact partipsiAmbCR2
Ambiguus nucleus loose partipsiAmbL3
Ambiguus nucleus semicompact formationipsiAmbSeC3
Boetzinger complexipsiBo3
Rostrodorsal part of the Boetzinger complexipsiBoRD2
Facial nucleusipsi72
Facial nucleus caudal partipsi7c-0.5
Hypoglossal nucleusipsi12S3
Intertrigeminal nucleusipsiI51
Paratrigeminal nucleusipsiPa50
Supratrigeminal nucleusipsiSu53
Mesencephalic trigeminal nucleusipsiMe53
Motor trigeminal nucleusipsiMo5-0.5
Motor trigeminal nucleus dorsolateral partipsiMo5DL3
Motor trigeminal nucleus ventromedial partipsiMo5VM4
Motor trigeminal nucleus jaw closing componentipsiMo5jcc1
Motor trigeminal nucleus jaw opening componentipsiMo5joc2
Spinal trigeminal nucleus layer 1ipsiSp5ncLa13
Spinal trigeminal nucleus layer 2ipsiSp5ncLa23
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract caudal partipsiSolca3
Nucleus of the solitary tract central partipsiSolCe-0.5
Nucleus of the solitary tract commissural partipsiSolC-0.5
Nucleus of the solitary tract rostral partipsiSolro-0.5
Dorsal motor nucleus of vagusipsi103
Dorsal raphe nucleus lateral wingipsiDRlw3
Caudal ventrolateral medullaipsiCVLM3
Rostral ventrolateral medullaipsiRVLM3
Rostral ventrolateral medulla sympathetic premotor neuronsipsiRVLMspn-0.5
Caudoventral respiratory groupipsiCVRG1.5
Dorsomedial rostral medulla oblongataipsiMeObdmr0
Paragigantocellular reticular nucleusipsiPGi-3
Pre Boetzinger complexipsiPrBo3
Retrotrapezoid nucleusipsiRTN4
Rostral ventral respiratory groupipsiRVRG2
Anterior rostral ventral respiratory groupipsiARVRG3
Posterior rostral ventral respiratory groupipsiPRVRG3
Choroidea innervating part of the superior salivatory nucleusipsiCSSN-0.5
Medial preoptic areaipsiMPA-0.5
Rostro-dorso kateral hypothalamic areaipsiRDLH-0.5
Paraventricular hypothalamic nucleus magnocellular division posterior partipsiPaMagP-0.5
Supraoptic nucleus anterior divisionipsiSOA-0.5
Supraoptic nucleus tuberal partipsiSOT-0.5
Subfornical organipsiSFO-0.5
Bed nucleus of the stria terminalisipsiBST-0.5
Central amygdaloid nucleusipsiCe-0.5
Area X C1ipsiSCL10C13
Spinal cord layer 5 C1ipsiSCL5C13
Spinal cord layer 7 C1ipsiSCL7C13
Area X C2ipsiSCL10C23
Spinal cord layer 5 C2ipsiSCL5C23
Spinal cord layer 7 C2ipsiSCL7C23
Cervical segment 3ipsiCS33
Area X C3ipsiSCL10C33
Spinal cord layer 5 C3ipsiSCL5C33
Spinal cord layer 7 C3ipsiSCL7C33
Phrenic motoneurons of lamina 9 C3ipsiPh9C33
Cervical segment 4ipsiCS43
Area X C4ipsiSCL10C43
Spinal cord layer 5 C4ipsiSCL5C43
Spinal cord layer 7 C4ipsiSCL7C43
Phrenic motoneurons of lamina 9 C4ipsiPh9C43
Cervical segment 5ipsiCS53
Area X C5ipsiSCL10C53
Spinal cord layer 5 C5ipsiSCL5C53
Spinal cord layer 7 C5ipsiSCL7C53
Phrenic motoneurons of lamina 9 C5ipsiPh9C53
Thoracal segment 1ipsiT13
Intermediolateral cell column T1ipsiIMLT12
Thoracal segment 2ipsiT23
Intermediolateral cell column T2ipsiIMLT22
Thoracal segment 3ipsiT33
Intermediolateral cell column T3ipsiIMLT32
Thoracal segment 4ipsiT43
Intermediolateral cell column T4ipsiIMLT42
Thoracal segment 5ipsiT53
Intermediolateral cell column T5ipsiIMLT52
Intermediolateral cell column T6ipsiIMLT60.5
Intermediolateral cell column T7ipsiIMLT70.5
Intermediolateral cell column T8ipsiIMLT80.5
Intermediolateral cell column T9ipsiIMLT90.5
Intermediolateral cell column T10ipsiIMLT100.5
Intermediolateral cell column T11ipsiIMLT110.5
Intermediolateral cell column T12ipsiIMLT120.5
Intermediolateral cell column T13ipsiIMLT130.5
PonscontraP3
Parabrachial nucleuscontraPB-0.5
Parabrachial nucleus rostral partcontraPBro3
Lateral reticular nucleuscontraLRt1
Lateral reticular nucleus surrounding nucleus ambiguuscontraLRtsamb2
Lateral reticular formation between nucleus ambiguus and Nucleus of the solitary tractcontraLRtbambSol2
Medulla oblongatacontraMeOb3
Ambiguus nucleuscontraAmb1
Boetzinger complexcontraBo0
Facial nucleuscontra71
Hypoglossal nucleuscontra12S2
Intertrigeminal nucleuscontraI51
Paratrigeminal nucleuscontraPa50
Supratrigeminal nucleuscontraSu52
Motor trigeminal nucleuscontraMo5-0.5
Motor trigeminal nucleus dorsolateral partcontraMo5DL2
Motor trigeminal nucleus ventromedial partcontraMo5VM3
Motor trigeminal nucleus jaw closing componentcontraMo5jcc3
Motor trigeminal nucleus jaw opening componentcontraMo5joc4
Dorsal motor nucleus of vaguscontra102
Rostral ventrolateral medullacontraRVLM-0.5
Caudoventral respiratory groupcontraCVRG0.5
Rostral ventral respiratory groupcontraRVRG1
Anterior rostral ventral respiratory groupcontraARVRG1
Posterior rostral ventral respiratory groupcontraPRVRG-0.5
Medial preoptic areacontraMPA-0.5
Paraventricular hypothalamic nucleus magnocellular division posterior partcontraPaMagP-0.5
Supraoptic nucleus anterior divisioncontraSOA-0.5
Supraoptic nucleus tuberal partcontraSOT-0.5
Subfornical organcontraSFO-0.5
Bed nucleus of the stria terminaliscontraBST-0.5
Cervical segment 3contraCS33
Cervical segment 4contraCS43
Cervical segment 5contraCS53
Thoracal segment 1contraT13
Thoracal segment 2contraT23
Thoracal segment 3contraT33
Thoracal segment 4contraT43
Thoracal segment 5contraT53
Sinoatrial nodeipsiSinoAtri3
Ganglia around the heartipsiAutoGHeart3
Vagus nerveipsiAutoV2.5
MyocardiumipsiOrgsCorMyo-0.5
Ventricle muscle wallipsiOrgsCorVenMyo3
MyocardiumcontraOrgsCorMyo-0.5
Cervical oesophagusipsiOrgsOesC3
Intercapsular brown adipose tissueipsiOrgBATi-10
SpleenipsiOrgSPL1
SpleencontraOrgSPL-0.5

Input from

NameSideAbbr.WeightDetails
Arch of aortaipsiaoArch1
A5 noradrenaline cellsipsiA5-0.5
A7 noradrenaline cellsipsiA71
Locus coeruleusipsiLC-0.5
Intermediate reticular nucleusipsiIRt-0.5
Ventral reticular formationipsiVRF-0.5
Ventrolateral reticular formationipsiVLRF1
Koelliker Fuse nucleusipsiKF2
Ventrolateral rostral medullary reticular formationipsiMdDVLR1
Parvicellular reticular nucleusipsiPCRt-0.5
Parvicellular reticular nucleus rostral portionipsipRNr3
Medulla oblongataipsiMeOb0.5
Ambiguus nucleusipsiAmb1
Facial nucleusipsi7-3
Glossopharyngeal nerveipsi9n0.5
Paratrigeminal nucleusipsiPa5-0.5
Mesencephalic trigeminal nucleusipsiMe5-0.5
Trigeminal ganglionipsi5Gn3
Mandibular region of the trigeminal ganglion at the level of the entry of the mandibular nerveipsi5GnMaEm3
Caudal area of the ophthalmomaxillary region of the trigeminal ganglionipsi5GnCOM3
Rostral area of the ophthalmomaxillary region of the trigeminal ganglionipsi5GnROM3
Superficial part of the trigeminal ganglionipsi5GnS3
Superior vestibular nucleusipsiSuVe1
Medial vestibular nucleusipsiMVe3
Medial vestibular nucleus caudal partipsiMVeP3
Medial vestibular nucleus dorsal partipsiMVeD-0.5
Medial vestibular nucleus magnocellular partipsiMVeMC1
Lateral vestibular nucleusipsiLVe1
Inferior vestibular nucleusipsiIVN3
Ventral inferior vestibular nucleusipsiVIVN-0.5
Nucleus of the solitary tract caudal partipsiSolca-2
Nucleus of the solitary tract rostral partipsiSolro-2
Nucleus of the solitary tract rostral poleipsiSolrop-0.5
Nucleus of the solitary tract ventrolateral partipsiSolVL1
Dorsal motor nucleus of vagusipsi10-2
Raphe magnus nucleusipsiRMg1
Raphe pallidus nucleusipsiRPa1
Caudal ventrolateral medullaipsiCVLM-0.5
Rostral ventrolateral medullaipsiRVLM-0.5
GracileipsiGra-2
Inferior oliveipsiIO-0.5
Retrotrapezoid nucleusipsiRTN3
Preoptic regionipsiPREO-0.5
Dorsal regionipsiDHR-0.5
Lateral hypothalamic areaipsiLH-0.5
Posterolateral hypothalamusipsiPLHY3
Posterior hypothalamic areaipsiPHA-0.5
Ventromedial hypothalamic nucleusipsiVMH-0.5
Arcuate nucleusipsiArc-0.5
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR3
Paraventricular hypothalamic nucleus lateral partipsiPaLa3
Paraventricular hypothalamic nucleusipsiPa1
Central paraventricular hypothalamic nucleusipsiPaCe1
Paraventricular nucleus ventral partipsiPaVe3
Perifornical nucleus caudal partipsiPeFC1
Amygdaloid complexipsiAC-0.5
Bed nucleus of the stria terminalisipsiBST-0.5
Central amygdaloid nucleus lateral divisionipsiCeL2
Central amygdaloid nucleus medial divisionipsiCeM2
Prelimbic cortexipsiPrL2
Infralimbic cortexipsiIL2.5
Infralimbic cortex rostral part layer 5bipsiILRL5b1.5
Posterior infralimbic cortex layer 5bipsiILPL5b2
Insular cortexipsiICX2
Sensory regionsipsiSR2
Dorsal root ganglion C2ipsiDRGC2-0.5
Dorsal root ganglion C3ipsiDRGC3-0.5
Dorsal root ganglion C4ipsiDRGC4-0.5
Spinal cord layer 5 C6ipsiSCL5C60
Spinal cord layer 3 C6ipsiSCL3C60
Spinal cord layer 4 C6ipsiSCL4C60
Spinal cord layer 1 C6ipsiSCL1C60
Spinal cord layer 2 C6ipsiSCL2C60
Spinal cord layer 5 C7ipsiSCL5C70
Spinal cord layer 3 C7ipsiSCL3C70
Spinal cord layer 4 C7ipsiSCL4C70
Spinal cord layer 1 C7ipsiSCL1C70
Spinal cord layer 2 C7ipsiSCL2C70
Spinal cord layer 5 C8ipsiSCL5C80
Spinal cord layer 3 C8ipsiSCL3C80
Spinal cord layer 4 C8ipsiSCL4C80
Spinal cord layer 1 C8ipsiSCL1C80
Spinal cord layer 2 C8ipsiSCL2C80
Dorsal root ganglion L2ipsiDRGL2-0.5
Medial cerebellar nucleus rostral partcontraMedR3
A5 noradrenaline cellscontraA5-0.5
A7 noradrenaline cellscontraA71
Locus coeruleuscontraLC-0.5
Intermediate reticular nucleuscontraIRt-0.5
Ventral reticular formationcontraVRF-0.5
Ventrolateral reticular formationcontraVLRF1
Koelliker Fuse nucleuscontraKF2
Ventrolateral rostral medullary reticular formationcontraMdDVLR3
Parvicellular reticular nucleuscontraPCRt-0.5
Paratrigeminal nucleuscontraPa5-0.5
Mesencephalic trigeminal nucleuscontraMe5-0.5
Medial vestibular nucleus caudal partcontraMVeP1
Inferior vestibular nucleuscontraIVN0.5
Nucleus of the solitary tractcontraSol1
Nucleus of the solitary tract rostral polecontraSolrop-0.5
Caudal ventrolateral medullacontraCVLM-0.5
Rostral ventrolateral medullacontraRVLM-0.5
Inferior olivecontraIO-0.5
Preoptic regioncontraPREO-0.5
Dorsal regioncontraDHR-0.5
Lateral hypothalamic areacontraLH-0.5
Posterolateral hypothalamuscontraPLHY3
Posterior hypothalamic areacontraPHA-0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Arcuate nucleuscontraArc-0.5
Nucleus paraventricularis [Periventricular zone anterior region]contraPaPAR3
Paraventricular hypothalamic nucleus lateral partcontraPaLa3
Central paraventricular hypothalamic nucleuscontraPaCe1
Paraventricular nucleus ventral partcontraPaVe3
Perifornical nucleus caudal partcontraPeFC1
Amygdaloid complexcontraAC-0.5
Bed nucleus of the stria terminaliscontraBST-0.5
Central amygdaloid nucleus medial divisioncontraCeM0.5
Infralimbic cortex rostral part layer 5bcontraILRL5b3
Posterior infralimbic cortex layer 5bcontraILPL5b4
Insular cortexcontraICX3
Sensory regionscontraSR3
Spinal cord layer 5 C6contraSCL5C60
Spinal cord layer 3 C6contraSCL3C60
Spinal cord layer 4 C6contraSCL4C60
Spinal cord layer 1 C6contraSCL1C60
Spinal cord layer 2 C6contraSCL2C60
Spinal cord layer 5 C7contraSCL5C70
Spinal cord layer 3 C7contraSCL3C70
Spinal cord layer 4 C7contraSCL4C70
Spinal cord layer 1 C7contraSCL1C70
Spinal cord layer 2 C7contraSCL2C70
Spinal cord layer 5 C8contraSCL5C80
Spinal cord layer 3 C8contraSCL3C80
Spinal cord layer 4 C8contraSCL4C80
Spinal cord layer 1 C8contraSCL1C80
Spinal cord layer 2 C8contraSCL2C80
Nodose ganglionipsiAutoNoG3
Cardiopulmonar nervesipsiAutoNCaPu3
Nervus petrosus majoripsinpm2
Cervical vagus nerveipsi10Cerv-0.5
BaroreceptorsipsiANSbar3
Carotid bodyipsiCaBo2
Chorda tympaniipsi7fnChoTy1
Inferior alveolar nerveipsiialv-0.5
Lingual nerveipsi5V3Li-0.5
Superior laryngeal nerveipsisLn1
Nodose ganglioncontraAutoNoG1
Carotid bodycontraCaBo1
Superior laryngeal nervecontrasLn1
CoripsiOrgsCor0
MyocardiumipsiOrgsCorMyo-1
AtriumcontraOrgsArtrium3
OesophagusipsiOrgsOes3
OesophaguscontraOrgsOes2
Soft palateipsiOrgSoPa3
TongueipsiOrgOCT-0.5
Root of the tongueipsiOrgOCrT3
PharynxipsiOrgPhar3
UvulaipsiOrgPharU3
Wall of pharynxipsiOrgWPhar-0.5
UvulacontraOrgPharU3
StomachipsiOrgsStomS0
Inferior pharyngeal constrictor muscleipsiMusciPC3
Wall of larynxipsiOrgWLary-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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