University of Rostock

Department of Anatomy

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Rat connectome



Central gray pons part left


Abbreviation
CGP
Color       
Superior regionsMesopontine central gray

SynonymsAbbr.Language
Central gray pons partCGPEng
Central gray pons  
Central gray pontis Eng
Pontine central grayPCGEng
Pontine central greyPCGEng
Pontine central grayPcgLat
Central grey pontine areaCGPnEng
Central gray of the ponsCGPu 
Substantia grisea centralis pontisSGCEng

SubregionsSide
Central gray pons dorsolateral partleft
Central gray pons part caudal partleft
Central gray pons part medial partleft
Dorsal part of pontine central grayleft
Lateral part of pontine central grayleft
Central gray pons part pars alphaleft
Central gray pons pars lateralisleft
Pontine central gray rostrocaudal extentleft
Central gray pons part rostral partleft
Ventrolateral margin of the central gray pons partleft
Ventral portions of the central gray pons partleft

Output to

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal grayipsiVLPAG2
Red nucleusipsiR2
Red nucleus medial partipsiRmed-0.5
Central tegmental field lateral partipsiTGACL2
Substantia nigra medial partipsiSNM-0.5
Ventral tegmental area A10ipsiVTA-0.5
Ventral tegmental area A10 lateral partipsiVTAL-0.5
Laterodorsal tegmental nucleusipsiLDTg2
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Posterior lobe of the cerebellumipsiCERCPL3
Anterior lobeipsiAnL2
Cerebellar lobule 10ipsiCERL10-0.5
Cerebellar lobule 6aipsiCERL6a1
Posterior lobe vermisipsiPLVERM2.5
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC1
Pontine sublaterodorsal nucleusipsiPsLdn-0.5
Deep mesencephalic nucleus dorsal partipsiDpMeD2
Cuneiforme nucleusipsiCnF-0.5
Parabrachial nucleusipsiPB-0.5
Ambiguus nucleusipsiAmb1
Nucleus of the solitary tractipsiSol0.5
Median raphe nucleusipsiMnR4
Superior paraolivary nucleusipsiSPO0
Lateral preoptic nucleusipsiLPN0.5
Medial preoptic nucleusipsiMPO0.5
Dorsomedial hypothalamic nucleusipsiDMHy0
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC1
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0.5
Lateral zoneipsiLHA3
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area juxtadorsomedial regionipsiJDM2
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0.5
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0.5
Lateral hypothalamic area posterior partipsiLHAp-0.5
Lateral hypothalamic nucleusipsiLHN1
Lateral hypothalamic area [Lateral zone mammillary level]ipsiLHLZM1
Lateral hypothalamic area [Lateral zone tuberal level]ipsiLHtu0.5
Medial division of the hypothalamusipsiMdH1
Anterior hypothalamic areaipsiAHA1
Anterior hypothalamic nucleusipsiAHn1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM-0.5
Posterior hypothalamic areaipsiPHA-0.5
Anteroventral periventricular nucleus 2ipsiAVPV20.5
Arcuate nucleusipsiArc3
Arcuate nucleus caudal halfipsiArcch-0.5
Paraventricular hypothalamic nucleus medial parvocellular partipsiMPPa-0.5
Paraventricular hypothalamic nucleusipsiPa2
Paraventricular hypothalamic nucleus anterior parvicellular subdivisionipsiaPavPo1
Paraventricular nucleus medial partipsiPame-0.5
Supraoptic nucleus [Supraoptic region]ipsiSO1
Nucleus properipsiSOnP1
Mammillary bodyipsiCMAM-0.5
Mammillary peduncleipsimp-2
Outermost part of the medial mammillary nucleus bodyipsiOmMMnB-0.5
Anterior group of the dorsal thalamusipsiATN3
Anterodorsal thalamic nucleusipsiAD-0.5
Parafascicular thalamic nucleusipsiPF-0.5
Mediodorsal thalamic nucleusipsiMD3
Reuniens thalamic nucleus caudomedial divisionipsiRecm1
Reunienes thalamic nucleus rostromedial divisionipsiRerm1
Reuniens thalamic nucleus rostrolateral divisionipsiRerl1
Ventrobasal complexipsiVB-0.5
Ventromedial thalamic nucleusipsiVM-0.5
Intralaminar nucleiipsiILN-0.5
Ventral thalamusipsiVNT-0.5
Ventral medial nucleus of the thalamusipsiVMT-0.5
Zona incertaipsiZI-0.5
Central amygdaloid nucleus lateral divisionipsiCeL1
Caudate putamen caudolateral partipsiCPucl2
Dentate gyrusipsiDG-0.5
Interpeduncular nucleusipsiIP-0.5
Caudalmost part of the septumipsiCmSER0.5
Ventrolateral periaqueductal graycontraVLPAG2
Red nucleuscontraR0
Ventral tegmental area A10contraVTA-0.5
Cerebellar lobule 10contraCERL10-0.5
Cerebellar lobule 6acontraCERL6a1
Deep mesencephalic nucleus dorsal partcontraDpMeD2
Nucleus of the solitary tractcontraSol0
Median raphe nucleuscontraMnR3
Medial preoptic nucleuscontraMPO0.5
Lateral zonecontraLHA-0.5
Lateral hypothalamic areacontraLH1
Lateral hypothalamic area posterior partcontraLHAp-0.5
Lateral hypothalamic nucleuscontraLHN0
Anterior hypothalamic nucleuscontraAHn0
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Anteroventral periventricular nucleus 2contraAVPV20.5
Arcuate nucleuscontraArc1
Supraoptic nucleus [Supraoptic region]contraSO1
Outermost part of the medial mammillary nucleus bodycontraOmMMnB-0.5
Anterior group of the dorsal thalamuscontraATN3
Anterodorsal thalamic nucleuscontraAD-0.5
Parafascicular thalamic nucleuscontraPF-0.5
Mediodorsal thalamic nucleuscontraMD3
Ventrobasal complexcontraVB-0.5
Ventromedial thalamic nucleuscontraVM-0.5
Intralaminar nucleicontraILN-0.5
Ventral medial nucleus of the thalamuscontraVMT-0.5
Zona incertacontraZI-0.5
Dentate gyruscontraDG-0.5

Input from

NameSideAbbr.WeightDetails
Central nucleus of the inferior colliculusipsiCIC0
External cortex of the inferior colliculusipsiECIC0
Ventral tegmental area A10ipsiVTA1
Dorsolateral humpipsiCERcndl0
Anterior interposed nucleusipsiAIN0
Posterior interposed nucleusipsiCERpin0
Lateral cerebellar nucleusipsiCERL0
Medial cerebellar nucleusipsiMed1
Nucleus incertus pars compactaipsiNIc2
Subcoeruleus nucleus dorsal partipsiSubCD1
11 beta hydroxysteroiddehydrogenase type-2 cellsipsiSolHSD20
Nucleus of the solitary tract rostral poleipsiSolrop-0.5
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus caudal partipsiDRC2.5
Dorsal raphe nucleus rostral partipsiDRr2.5
Rostral linear nucleus of the rapheipsiRLi1
Raphe magnus nucleusipsiRMg1
Substantia innominataipsiSI2
Intermediate hypothalamic cell groupsipsiIHCG1
Lateral preoptic areaipsiLPO2
Medial preoptic areaipsiMPA1
Medial preoptic area central partipsiMPAce3
Medial preoptic area dorsolateral partipsiMPADL1
Medial preoptic area lateral partipsiMPAL3
Medial preoptic area medial partipsiMPAm3
Dorsomedial hypothalamic nucleusipsiDMHy1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0.5
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar1
Lateral hypothalamic area posterior part [Preoptic anterior region]ipsiLHApPAR1
Lateral hypothalamic area premammillary subfornical region [Preoptic anterior region]ipsiLHAsfp2.5
Lateral zoneipsiLHA2
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area juxtadorsomedial regionipsiJDM2
Lateral hypothalamic area motor related juxtaventromedial regionipsiLHAjvm1
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd1
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0.5
Lateral hypothalamic area subfornical region anterior zoneipsiLHAsfa0.5
Lateral hypothalamic area [Lateral zone mammillary level]ipsiLHLZM-2
Anterior hypothalamic areaipsiAHA2
Anterior hypothalamic area central partipsiAHAC-2
Anterior hypothalamic area posterior partipsiAHAP-0.5
Anterior hypothalamic nucleusipsiAHn-2
Anterior part of the anterior hypothalamic nucleusipsiAHna-2
Dorsal hypothalamic areaipsiDA3
Dorsomedial hypothalamic nucleus anterior partipsiDMA2
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus anterior partipsiVMHA1
Ventromedial hypothalamic nucleus central partipsiVMHC1
Ventromedial hypothalamic nucleus dorsal partipsiVMHd3
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM0.5
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1
Paraventricular hypothalamic nucleusipsiPa3
Premammillary nucleus dorsal partipsiPMD0.5
Perifornical nucleusipsiPeF2
Retrochiasmatic area lateral partipsiRChL-2
Centrolateral thalamic nucleusipsiCL3
Zona incertaipsiZI3
Medial lemniscusipsiml1
Midbrain periventricular fiber systemipsilftmpe-2
Bed nucleus of the stria terminalis anterior division dorsomedial nucleusipsiBSTdm3
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM1
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV1
Bed nucleus of the stria terminalis magnocellular nucleusipsiBSTmc2
Bed nucleus of the stria terminalis lateral divisionipsiBSTL-0.5
Bed nucleus of the stria terminalis ventral tipipsiBNSTvt1
Central amygdaloid nucleusipsiCe-1
Medial amygdaloid nucleus anterodorsal partipsiMeAD1
Retrosplenial agranular cortexipsiRSA1
Infralimbic cortexipsiIL2
Medial orbital cortexipsiMO1
Ventral orbital cortexipsiVO2
Dorsolateral humpcontraCERcndl0
Anterior interposed nucleuscontraAIN0
Posterior interposed nucleuscontraCERpin0
Lateral cerebellar nucleuscontraCERL2
Medial cerebellar nucleuscontraMed1
Dorsal raphe nucleus caudal partcontraDRC2
Dorsal raphe nucleus rostral partcontraDRr2
Intermediate hypothalamic cell groupscontraIHCG-0.5
Medial preoptic area central partcontraMPAce-0.5
Medial preoptic area lateral partcontraMPAL-0.5
Medial preoptic area medial partcontraMPAm-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Lateral zonecontraLHA-0.5
Anterior hypothalamic areacontraAHA-0.5
Dorsal hypothalamic areacontraDA-0.5
Ventromedial hypothalamic nucleuscontraVMH1
Ventromedial hypothalamic nucleus anterior partcontraVMHA0.5
Ventromedial hypothalamic nucleus central partcontraVMHC0.5
Ventromedial hypothalamic nucleus dorsomedial partcontraVMHDM1
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Incerto hypothalamic areacontraicHYPO1
Premammillary nucleus dorsal partcontraPMD0.5
Perifornical nucleuscontraPeF-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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