University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Dorsomedial shell left


Abbreviation
AcbShdm
Color       
Superior regionsAccumbens nucleus shell

SynonymsAbbr.Language
 AcbSHdm 
Dorsomedial shellAcbShdmEng
Dorsomedial part of accumbens nucleus shell Eng

SubregionsSide
Dorsomedial shell of the accumbens nucleus lateral partleft
Dorsomedial corner of the accumbens shellleft

Output to

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC3
Substantia nigra reticular partipsiSNR2
Ventral tegmental area A10ipsiVTA2
Ventral tegmental area A10 ventromedial partipsiVTAvm2
Retrorubral nucleusipsiRR1
Pedunculopontine tegmental nucleusipsiPPTg2
Lateral preoptic areaipsiLPO2
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar3
Lateral hypothalamic area anterior partipsiLHAa3
Lateral zone mammillary levelipsiLHm3
Lateral zone tuberal levelipsiLHt3
A8 dopamine cells retrorubral group caudal partipsiRRFC1
Bed nucleus of the stria terminalisipsiBST1
Globus pallidusipsiGP1
Ventral pallidum dorsomedial partipsiVPdm3
Ventral pallidum central partipsiVPce1
Interpeduncular nucleus rostrodorsal subnucleusipsiIPRrd2

Input from

NameSideAbbr.WeightDetails
Ventral tegmental area A10 lateral partipsiVTAL-0.5
Ventral tegmental area A10 medial partipsiVTAM2
Locus coeruleusipsiLC-0.5
Lateral parabrachial nucleusipsiLPB-0.5
Lateral parabrachial nucleus central partipsiLPBC-10
Lateral parabrachial nucleus external partipsiLPBE-10
Lateral parabrachial nucleus lateral partipsiLPBL-10
Lateral parabrachial nucleus superior partipsiLPBS-10
Parabrachial nucleus medialipsiPBnMe-0.5
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract caudal partipsiSolca-10
Nucleus of the solitary tract commissural partipsiSolC-10
Nucleus of the solitary tract medial partipsiSolM-10
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus dorsal partipsiDRD-10
Dorsal raphe nucleus ventral partipsiDRV-10
Median raphe nucleusipsiMnR-10
Caudal ventrolateral medullaipsiCVLM-0.5
Rostral ventrolateral medullaipsiRVLM-10
Dorsal endopiriform nucleusipsiDEn-0.5
Lateral hypothalamic areaipsiLH-0.5
Ventromedial hypothalamic nucleus central partipsiVMHC-10
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL-10
Arcuate nucleus lateral partipsiArcL-10
Paraventricular hypothalamic nucleus dorsal cap [Periventricular zone anterior region]ipsiPaDC-10
Ventral parvocellular subdivision of the paraventricular hypothalamic nucleusipsiVPaPc-10
Perifornical nucleus lateral partipsiPeFL-0.5
Perifornical nucleus medial partipsiPeFM-0.5
Central medial thalamic nucleusipsiCM-0.5
Mediodorsal thalamic nucleusipsiMD-0.5
Intermediodorsal thalamic nucleusipsiIMD-10
Mediodorsal thalamic nucleus central partipsiMDC-10
Mediodorsal thalamic nucleus medial partipsiMDM-10
Midline group of the dorsal thalamusipsiMTN-0.5
Paratenial thalamic nucleusipsiPT-0.5
Paraventricular thalamic nucleusipsiPV-0.5
Paraventricular thalamic nucleus anterior partipsiPVA-0.5
Paraventricular thalamic nucleus posterior partipsiPVP-0.5
Paraventricular thalamic nucleus dorsal most posterior partipsiPVPdm-0.5
Paraventricular thalamic nucleus dorsoventral extentipsiPVTdv-0.5
Laterodorsal thalamic nucleus dorsomedial partipsiLDDM-10
Laterodorsal thalamic nucleus ventrolateral partipsiLDVL-10
Basal nucleus parvicellular partipsiBpc-1
Basolateral amygdaloid nucleusipsiBL1
Anterior basolateral nucleusipsiBLA-0.5
Posterior basolateral nucleusipsiBLP-0.5
Posterior basolateral nucleus parvicellular subdivision caudal partipsiBLPpccp-0.5
Subiculum ventral partipsiSv-0.5
Ventral hippocampusipsiHIPPv1
Piriform cortexipsiPir-0.5
Prelimbic cortex dorsal partipsiPrLd-0.5
Prelimbic cortex ventral partipsiPrLv-0.5
Agranular insular cortex posterior partipsiAIP-0.5
Lateral septal nucleus dorsal partipsiLSD-0.5
Ventral tegmental area A10 lateral partcontraVTAL-0.5
Lateral parabrachial nucleus central partcontraLPBC-10
Dorsal endopiriform nucleuscontraDEn-0.5
Lateral hypothalamic areacontraLH-0.5
Perifornical nucleus lateral partcontraPeFL-0.5
Perifornical nucleus medial partcontraPeFM-0.5
Central medial thalamic nucleuscontraCM-0.5
Mediodorsal thalamic nucleuscontraMD-0.5
Midline group of the dorsal thalamuscontraMTN-0.5
Paratenial thalamic nucleuscontraPT-0.5
Paraventricular thalamic nucleus anterior partcontraPVA-0.5
Paraventricular thalamic nucleus posterior partcontraPVP-0.5
Anterior basolateral nucleuscontraBLA-0.5
Posterior basolateral nucleuscontraBLP-0.5
Piriform cortexcontraPir-0.5
Agranular insular cortex posterior partcontraAIP-0.5
Lateral septal nucleus dorsal partcontraLSD-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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