University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Ventral horn C6 left


Abbreviation
VHC6
Color       
Superior regionsSpinal cord layers C6

SynonymsAbbr.Language
Ventral horn C6VHC6Eng

SubregionsSide
Base of ventral horn C6left
Intermediate zone C6left
Intermediate zone of ventral horn C6left
Interneuron groups of layer 9 C6left
Motoneuron groups of layer 9 C6left
Spinal cord layer 9 C6left
Medial ventral horn C6left
Ventral horn C6 ventrolateral partleft
Dorsolateral column in lower one-third of ventral horn at the level of C6left
Ventral part of dorsolateral column at the level of C6left

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG1
Inferior colliculusipsiICOL1
Superior colliculusipsiSC1
Tegmental areaipsiTGA-0.5
Posterior lobe of the cerebellumipsiCERCPL1
Anterior lobeipsiAnL2
Mesencephalic reticular formationipsiMRF1
Cuneiforme nucleusipsiCnF-0.5
Gigantocellular reticular nucleusipsiGi3
Lateral reticular nucleusipsiLRt3
Lateral reticular nucleus magnocellular partipsiLRtMC2
Lateral reticular nucleus parvicellular partipsiLRtPC1
Lateral reticular nucleus subtrigeminal partipsiLRtS52
Nucleus of the solitary tractipsiSol-0.5
Dorsal column nucleiipsiDCN2
Retrotrapezoid nucleusipsiRTN1
Lateral hypothalamic areaipsiLH1.5
Dorsal hypothalamic areaipsiDA1.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0.5
Paraventricular hypothalamic nucleusipsiPa0.5
Suprachiasmatic nucleusipsiSCh0.5
Supraoptic nucleus [Supraoptic region]ipsiSO0.5
Cervical segment 1ipsiCS1-0.5
Lumbar segment 1ipsiL1-1
Central graycontraCG-0.5
Tegmental areacontraTGA-0.5
Cuneiforme nucleuscontraCnF-0.5
Caudal part of the lateral reticular nucleuscontraCaLRt3
Caudal half of the lateral reticular nucleuscontraChLRt2
Lateral reticular nucleus magnocellular partcontraLRtMC2
Lateral reticular nucleus parvicellular partcontraLRtPC1
Lateral reticular nucleus rostral partcontraLRtr1
Lateral reticular nucleus subtrigeminal partcontraLRtS50
Retrotrapezoid nucleuscontraRTN0.5
Lateral hypothalamic areacontraLH3
Dorsal hypothalamic areacontraDA3
Dorsomedial hypothalamic nucleus [Medial zone]contraDM3
Paraventricular hypothalamic nucleuscontraPa3
Suprachiasmatic nucleuscontraSCh3
Supraoptic nucleus [Supraoptic region]contraSO3
ThalamuscontraT-0.5
Cervical segment 1contraCS1-0.5
Brachial plexusipsibraPlex-2
Facial nerveipsi7fn-0.5
Median nerveipsimen-2
Musculocutaneous nerveipsimuscut-2
Cervical phrenic nerveipsiphrenC-0.5
Radial nerveipsirad-2
Ulnar nerveipsiuln-2
Biceps brachii muscleipsiMuscFxFoBB-0.5
Forelimb extensor digitorum communisipsiMuscFoEDC-0.5
Trapezius muscleipsiMuscTrap-0.5

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG0
Dorsolateral periaqueductal gray caudal partipsiPAGdlc0
Ventrolateral periaqueductal gray caudal partipsiPAGvlc0
Ventrolateral periaqueductal gray rostral partipsiPAGvlr0
Red nucleusipsiR4
Dorsomedial portion of the red nucleus caudal partipsiRnCaDm-0.5
Red nucleus rostral partipsiRnRo-0.5
Red nucleus ventrolateral partipsiRveL-0.5
Pedunculopontine tegmental nucleusipsiPPTg3
Interstitial nucleus of CajalipsiInC1
A5 noradrenaline cellsipsiA51.5
A7 noradrenaline cellsipsiA71.5
Locus coeruleusipsiLC2
Locus coeruleus caudal partipsiLCca-0.5
Locus coeruleus ventral partipsiLCv-0.5
Parapyramidal nucleusipsiPPy-0.5
Midline reticular formationipsiMiRF3
Mesencephalic reticular formationipsiMRF0.5
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus alpha partipsiGiA4
Gigantocellular reticular nucleus ventral partipsiGiV1
Medial medullary reticular nucleusipsiMMdD3
Medial subnucleus reticularis ventralisipsiMSRV1
Subcoeruleus nucleusipsiSubC2
Spinal vestibular nucleusipsiSpVe3
Superior vestibular nucleusipsiSuVe3
Medial vestibular nucleus caudal partipsiMVeP-0.5
Medial vestibular nucleus rostral partipsiMVeR-0.5
Lateral vestibular nucleusipsiLVe3
Nucleus of the solitary tract ventrolateral partipsiSolVL-0.5
Raphe nucleiipsiRAN3
Caudal raphe nucleiipsiRANc-0.5
Raphe magnus nucleusipsiRMg4
Raphe obscurus nucleusipsiROb4
Raphe pallidus nucleusipsiRPa4
Ventral lateral medulla oblongataipsiMVL-0.5
Nucleus interfascicularis hypoglossiipsiNIFH-0.5
Paragigantocellular reticular nucleusipsiPGi1
Lateral paragigantocellular nucleusipsiLPGi2
Retrotrapezoid nucleusipsiRTN-0.5
Lateral hypothalamic areaipsiLH1
Midlateral posterior hypothalamic areaipsiPHAmL0
Parafascicular thalamic nucleusipsiPF1
Parafascicular thalamic nucleus lateral partipsiPFL1
Zona incertaipsiZI-0.5
Dorsal root ganglion C6ipsiDRGC61
Dorsal root ganglion C7ipsiDRGC7-0.5
Periaqueductal graycontraPAG0
Dorsolateral periaqueductal gray caudal partcontraPAGdlc0
Ventrolateral periaqueductal gray caudal partcontraPAGvlc0
Ventrolateral periaqueductal gray rostral partcontraPAGvlr0
Red nucleuscontraR4
Pedunculopontine tegmental nucleuscontraPPTg3
Interstitial nucleus of CajalcontraInC1
A5 noradrenaline cellscontraA51
A7 noradrenaline cellscontraA71
Locus coeruleuscontraLC2
Mesencephalic reticular formationcontraMRF0.5
Gigantocellular reticular nucleuscontraGi3
Gigantocellular reticular nucleus alpha partcontraGiA4
Gigantocellular reticular nucleus ventral partcontraGiV0.5
Medial medullary reticular nucleuscontraMMdD3
Medial subnucleus reticularis ventraliscontraMSRV1
Subcoeruleus nucleuscontraSubC2
Spinal vestibular nucleuscontraSpVe3
Superior vestibular nucleuscontraSuVe3
Medial vestibular nucleus caudal partcontraMVeP-0.5
Medial vestibular nucleus rostral partcontraMVeR-0.5
Lateral vestibular nucleuscontraLVe3
Raphe nucleicontraRAN3
Raphe pallidus nucleuscontraRPa4
Nucleus interfascicularis hypoglossicontraNIFH-0.5
Paragigantocellular reticular nucleuscontraPGi1
Lateral paragigantocellular nucleuscontraLPGi1
Retrotrapezoid nucleuscontraRTN-0.5
Parafascicular thalamic nucleuscontraPF1
Parafascicular thalamic nucleus lateral partcontraPFL1
Cerebral cortexcontraCEC1
Forelimb motor cortexcontraFMCx3
Hindlimb motor cortexcontraHMCx0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications