University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Isthmic reticular formation left


Abbreviation
isRT
Color       
Superior regionsReticular system

SynonymsAbbr.Language
Isthmic reticular formationisRTEng
Reticular region just ventral to the superior colliculus Eng

Output to

NameSideAbbr.WeightDetails
Central gray dorsolateral partipsiCGDL2
Superior colliculusipsiSC2
Superior colliculus deep layers medial partipsiSCdM2
Superior colliculus medial thirdipsimtSC2
Interstitial nucleus of CajalipsiInC-0.5
Pontine reticular nucleus paramedian partipsiPRNpm0.5
Dorsal raphe nucleus dorsal coreipsiDRDc3
Interstitial nucleus of CajalcontraInC-0.5
Pontine reticular nucleus paramedian partcontraPRNpm1.5
Dorsal raphe nucleus dorsal corecontraDRDc3

Input from

NameSideAbbr.WeightDetails
Dorsomedial hypothalamic nucleusipsiDMHy0
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR2
Lateral hypothalamic area dorsal partipsiLHd1
Lateral hypothalamic area ventral partipsiLHAvp2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Periventricular zoneipsiPVZ1
Medial part of the caudal perifornical areaipsiPeFCM2
Lateral part of the caudal perifornical areaipsiPeFCL1
Lateral cervical nucleus C1ipsiLatCC1-0.5
Area X C1ipsiSCL10C1-0.5
Spinal cord layer 5 C1ipsiSCL5C11
Spinal cord layer 6 C1ipsiSCL6C11
Spinal cord layer 4 C1ipsiSCL4C11
Spinal cord layer 1 C1ipsiSCL1C1-0.5
Spinal cord layer 7 C1ipsiSCL7C11
Spinal cord layer 8 C1ipsiSCL8C11
Lateral cervical nucleus C2ipsiLatCC2-0.5
Area X C2ipsiSCL10C2-0.5
Spinal cord layer 5 C2ipsiSCL5C21
Spinal cord layer 6 C2ipsiSCL6C21
Spinal cord layer 4 C2ipsiSCL4C21
Spinal cord layer 1 C2ipsiSCL1C2-0.5
Spinal cord layer 7 C2ipsiSCL7C21
Spinal cord layer 8 C2ipsiSCL8C21
Dorsomedial hypothalamic nucleuscontraDMHy0
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR-0.5
Lateral hypothalamic area dorsal partcontraLHd-0.5
Lateral hypothalamic area ventral partcontraLHAvp-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Periventricular zonecontraPVZ-0.5
Medial part of the caudal perifornical areacontraPeFCM-0.5
Lateral part of the caudal perifornical areacontraPeFCL-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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