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Rat connectome



Lateral cervical nucleus C1 left


Abbreviation
LatCC1
Color       
Superior regionsCervical segment 1

SynonymsAbbr.Language
Lateral cervical nucleus C1LatCC1Eng

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG1
Lateral periaqueductal grayipsiLPAG-0.5
Periaqueductal gray lateroventral partipsiPAGLV0.5
Prerubral fieldipsiPR-3
Tegmental areaipsiTGA1
Lateral tegmental areaipsiLTGA0.5
Isthmic reticular formationipsiisRT-0.5
Magnocellular reticular nucleusipsiNRMC-0.5
Mesencephalic reticular formationipsiMRF-0.5
Cuneiforme nucleusipsiCnF1
Gigantocellular reticular nucleusipsiGi-0.5
Dorsal column nucleiipsiDCN2
Cuneate nucleusipsiCu3
Anteromedial thalamic nucleusipsiAM-3
Paracentral thalamic nucleusipsiPC-3
Rhomboid thalamic nucleusipsiRh-3
Posterior thalamic nuclear groupipsiPo1
Submedius thalamic nucleusipsiSub0.5
Reuniens thalamic nucleusipsiRe-3
Reuniens thalamic nucleus ventral partipsiReV-3
Ventrolateral thalamic nucleusipsiVL-3
Ventrobasal complexipsiVB0.5
Ventral posterolateral thalamic nucleusipsiVPL1
Ventral posteromedial thalamic nucleusipsiVPM1
Ventrobasal complex most lateral partipsiVBmL0
Ventromedial thalamic nucleusipsiVM-3
Intralaminar nucleiipsiILN1
Posterior groupipsiPTG-3
Ventral medial nucleus of the thalamusipsiVMT-3
Area X L4ipsiSCL10L4-0.5
Spinal cord layer 8 L4ipsiSCL8L4-0.5
Dorsal horn L5ipsiDHL51
Dorsal horn L6ipsiDHL61
Dorsal horn S1ipsiDHS11
MesencephaloncontraMEC0.5
Central graycontraCG3
Central gray mesencephalic part intercollicular levelcontraCGMint1
Nucleus of DarkschewitschcontraDk-0.5
Oculomotor nucleuscontra3-0.5
Lateral periaqueductal graycontraLPAG-0.5
Periaqueductal gray lateroventral partcontraPAGLV1
Intercollicular nucleuscontraInCo-0.5
Superior colliculuscontraSC-0.5
Tegmental areacontraTGA3
Lateral tegmental areacontraLTGA3
Edinger Westphal nucleuscontraEW-0.5
Interstitial nucleus of CajalcontraInC-0.5
Magnocellular reticular nucleuscontraNRMC-0.5
Cuneiforme nucleuscontraCnF3
Gigantocellular reticular nucleuscontraGi-0.5
Cuneate nucleuscontraCu3
Lateral group of the dorsal thalamuscontraLAT3
Posterior thalamic nuclear groupcontraPo2
Medial part of posterior thalamic nuclear groupcontraPoM-0.5
Submedius thalamic nucleuscontraSub0.5
Ventrobasal complexcontraVB3
Ventral posterolateral thalamic nucleuscontraVPL2
Ventral posteromedial thalamic nucleuscontraVPM2
Ventrobasal complex most lateral partcontraVBmL-0.5
Ventral posterolateral thalamic nucleus parvicellular partcontraVPLpc-0.5
Intralaminar nucleicontraILN2
Pretectal regioncontraPRT-0.5
Area X L4contraSCL10L4-0.5
Spinal cord layer 8 L4contraSCL8L4-0.5
Dorsal horn L5contraDHL51
Dorsal horn L6contraDHL61
Dorsal horn S1contraDHS11
CoripsiOrgsCor-0.5

Input from

NameSideAbbr.WeightDetails
Parabrachial nucleusipsiPB-0.5
Lateral hypothalamic areaipsiLH1
Spinal cord layer 5 C1ipsiSCL5C1-0.5
Spinal cord layer 3 C1ipsiSCL3C1-0.5
Spinal cord layer 4 C1ipsiSCL4C1-0.5
Spinal cord layer 5 C2ipsiSCL5C2-0.5
Spinal cord layer 3 C2ipsiSCL3C2-0.5
Spinal cord layer 4 C2ipsiSCL4C2-0.5
Spinal cord layer 5 C3ipsiSCL5C3-0.5
Spinal cord layer 3 C3ipsiSCL3C3-0.5
Spinal cord layer 4 C3ipsiSCL4C3-0.5
Spinal cord layer 5 C4ipsiSCL5C4-0.5
Spinal cord layer 3 C4ipsiSCL3C4-0.5
Spinal cord layer 4 C4ipsiSCL4C4-0.5
Spinal cord layer 5 C5ipsiSCL5C5-0.5
Spinal cord layer 3 C5ipsiSCL3C5-0.5
Spinal cord layer 4 C5ipsiSCL4C5-0.5
Spinal cord layer 5 C6ipsiSCL5C6-0.5
Spinal cord layer 3 C6ipsiSCL3C6-0.5
Spinal cord layer 4 C6ipsiSCL4C6-0.5
Spinal cord layer 5 C7ipsiSCL5C7-0.5
Spinal cord layer 3 C7ipsiSCL3C7-0.5
Spinal cord layer 4 C7ipsiSCL4C7-0.5
Spinal cord layer 5 C8ipsiSCL5C8-0.5
Spinal cord layer 3 C8ipsiSCL3C8-0.5
Spinal cord layer 4 C8ipsiSCL4C8-0.5
Spinal cord layer 5 T1ipsiSCL5T1-0.5
Spinal cord layer 3 T1ipsiSCL3T1-0.5
Spinal cord layer 4 T1ipsiSCL4T1-0.5
Spinal cord layer 5 T2ipsiSCL5T2-0.5
Spinal cord layer 3 T2ipsiSCL3T2-0.5
Spinal cord layer 4 T2ipsiSCL4T2-0.5
Spinal cord layer 5 T3ipsiSCL5T3-0.5
Spinal cord layer 3 T3ipsiSCL3T3-0.5
Spinal cord layer 4 T3ipsiSCL4T3-0.5
Spinal cord layer 5 T4ipsiSCL5T4-0.5
Spinal cord layer 3 T4ipsiSCL3T4-0.5
Spinal cord layer 4 T4ipsiSCL4T4-0.5
Spinal cord layer 5 T5ipsiSCL5T5-0.5
Spinal cord layer 3 T5ipsiSCL3T5-0.5
Spinal cord layer 4 T5ipsiSCL4T5-0.5
Spinal cord layer 5 T6ipsiSCL5T6-0.5
Spinal cord layer 3 T6ipsiSCL3T6-0.5
Spinal cord layer 4 T6ipsiSCL4T6-0.5
Spinal cord layer 5 T7ipsiSCL5T7-0.5
Spinal cord layer 3 T7ipsiSCL3T7-0.5
Spinal cord layer 4 T7ipsiSCL4T7-0.5
Spinal cord layer 5 T8ipsiSCL5T8-0.5
Spinal cord layer 3 T8ipsiSCL3T8-0.5
Spinal cord layer 4 T8ipsiSCL4T8-0.5
Spinal cord layer 5 T9ipsiSCL5T9-0.5
Spinal cord layer 3 T9ipsiSCL3T9-0.5
Spinal cord layer 4 T9ipsiSCL4T9-0.5
Spinal cord layer 5 T10ipsiSCL5T10-0.5
Spinal cord layer 3 T10ipsiSCL3T10-0.5
Spinal cord layer 4 T10ipsiSCL4T10-0.5
Spinal cord layer 5 T11ipsiSCL5T11-0.5
Spinal cord layer 3 T11ipsiSCL3T11-0.5
Spinal cord layer 4 T11ipsiSCL4T11-0.5
Spinal cord layer 5 T12ipsiSCL5T12-0.5
Spinal cord layer 3 T12ipsiSCL3T12-0.5
Spinal cord layer 4 T12ipsiSCL4T12-0.5
Spinal cord layer 5 T13ipsiSCL5T13-0.5
Spinal cord layer 3 T13ipsiSCL3T13-0.5
Spinal cord layer 4 T13ipsiSCL4T13-0.5
Lumbar enlargementipsiLSegE-0.5
Spinal cord layer 5 L1ipsiSCL5L1-0.5
Spinal cord layer 3 L1ipsiSCL3L1-0.5
Spinal cord layer 4 L1ipsiSCL4L1-0.5
Spinal cord layer 5 L2ipsiSCL5L2-0.5
Spinal cord layer 3 L2ipsiSCL3L2-0.5
Spinal cord layer 4 L2ipsiSCL4L2-0.5
Spinal cord layer 5 L3ipsiSCL5L3-0.5
Spinal cord layer 3 L3ipsiSCL3L3-0.5
Spinal cord layer 4 L3ipsiSCL4L3-0.5
Spinal cord layer 5 L4ipsiSCL5L4-0.5
Spinal cord layer 3 L4ipsiSCL3L4-0.5
Spinal cord layer 4 L4ipsiSCL4L4-0.5
Spinal cord layer 5 L5ipsiSCL5L5-0.5
Spinal cord layer 3 L5ipsiSCL3L5-0.5
Spinal cord layer 4 L5ipsiSCL4L5-0.5
Spinal cord layer 5 L6ipsiSCL5L6-0.5
Spinal cord layer 3 L6ipsiSCL3L6-0.5
Spinal cord layer 4 L6ipsiSCL4L6-0.5
Spinal cord layer 5 S1ipsiSCL5S1-0.5
Spinal cord layer 3 S1ipsiSCL3S1-0.5
Spinal cord layer 4 S1ipsiSCL4S1-0.5
Spinal cord layer 5 S2ipsiSCL5S2-0.5
Spinal cord layer 3 S2ipsiSCL3S2-0.5
Spinal cord layer 4 S2ipsiSCL4S2-0.5
Spinal cord layer 5 S3ipsiSCL5S3-0.5
Spinal cord layer 3 S3ipsiSCL3S3-0.5
Spinal cord layer 4 S3ipsiSCL4S3-0.5
Spinal cord layer 5 S4ipsiSCL5S4-0.5
Spinal cord layer 3 S4ipsiSCL3S4-0.5
Spinal cord layer 4 S4ipsiSCL4S4-0.5
Spinal cord layer 5 Co1ipsiSCL5Co1-0.5
Spinal cord layer 3 Co1ipsiSCL3Co1-0.5
Spinal cord layer 4 Co1ipsiSCL4Co1-0.5
Spinal cord layer 5 Co2ipsiSCL5Co2-0.5
Spinal cord layer 3 Co2ipsiSCL3Co2-0.5
Spinal cord layer 4 Co2ipsiSCL4Co2-0.5
Spinal cord layer 5 Co3ipsiSCL5Co3-0.5
Spinal cord layer 3 Co3ipsiSCL3Co3-0.5
Spinal cord layer 4 Co3ipsiSCL4Co3-0.5
Parabrachial nucleuscontraPB-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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