University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Genioglossus muscle right


Abbreviation
MuscGenioG
Color       
Superior regionsMuscle system

SynonymsAbbr.Language
Genioglossus muscleMuscGenioGEng

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG-10
Red nucleusipsiR-10
Central tegmental fieldipsiTGAC-10
Substantia nigra compact partipsiSNC-10
Substantia nigra lateral partipsiSNL-10
Substantia nigra reticular partipsiSNR-10
Laterodorsal tegmental nucleusipsiLDTg-10
Ventral tegmental nucleusipsiVTg-10
Pedunculopontine tegmental nucleusipsiPPTg-10
Subtegmental nucleusipsiSubT-10
A5 noradrenaline cellsipsiA5-10
Locus coeruleusipsiLC-10
Nucleus of Probsts bundleipsiNPB-10
Pontine nuclei caudal partipsiBPNc-10
Pontine nucleus oralisipsiPnOr-10
Pontine nucleus ventral partipsiBPNv-10
Prepositus nucleusipsiPr-10
Paramedian reticular nucleusipsiPMn-10
Cuneiforme nucleusipsiCnF-10
Koelliker Fuse nucleusipsiKF-10
Lateral parabrachial nucleusipsiLPB-10
Parabrachial nucleus medialipsiPBnMe-10
Gigantocellular reticular nucleusipsiGi-10
Gigantocellular reticular nucleus alpha partipsiGiA-10
Gigantocellular reticular nucleus ventral partipsiGiV-10
Lateral reticular nucleusipsiLRt-10
Medullary reticular nucleus dorsal partipsiMdDd-10
Medullary reticular nucleus ventral partipsiMdV-10
Parvicellular reticular nucleusipsiPCRt-10
Subcoeruleus nucleusipsiSubC-10
Facial nucleusipsi7-10
Hypoglossal motor nucleusipsi12M-10
Intertrigeminal nucleusipsiI5-10
Paratrigeminal nucleusipsiPa5-10
Supratrigeminal nucleusipsiSu5-10
Mesencephalic trigeminal nucleusipsiMe5-10
Motor trigeminal nucleusipsiMo5-10
Principal sensory trigeminal nucleusipsiPr5-10
Spinal trigeminal nucleus caudal partipsiSp5C-10
Spinal trigeminal nucleus interpolar partipsiSp5I-10
Spinal trigeminal nucleus oral partipsiSp5O-10
Nucleus of the solitary tractipsiSol-10
Dorsal raphe nucleusipsiDR-10
Raphe magnus nucleusipsiRMg-10
Raphe pallidus nucleusipsiRPa-10
Rostral ventrolateral medullaipsiRVLM-10
Caudal interstitial nucleus of the medial longitudinal fasciculusipsiCI-10
Dorsal paragigantocellular nucleusipsiDPGi-10
Lateral paragigantocellular nucleusipsiLPGi-10

Input from

NameSideAbbr.WeightDetails
Locus coeruleuscontraLC-0.5
Parapyramidal nucleuscontraPPy-0.5
Intermediate reticular nucleuscontraIRt-0.5
Rostroventrolateral reticular nucleuscontraRVL-0.5
Pontine reticular nucleuscontraPRN-0.5
Koelliker Fuse nucleuscontraKF-0.5
Lateral parabrachial nucleuscontraLPB-0.5
Gigantocellular reticular nucleuscontraGi-0.5
Medullary reticular nucleus dorsal partcontraMdDd-0.5
Medullary reticular nucleus ventral partcontraMdV-0.5
Parvicellular reticular nucleuscontraPCRt-0.5
Subcoeruleus nucleuscontraSubC-0.5
Ambiguus nucleuscontraAmb-0.5
Area postremacontraAP-0.5
Hypoglossal nucleuscontra12S1
Hypoglossal nucleus ventral partcontra12SV-0.5
Dorsomedial part of the spinal trigeminal nucleuscontraSp5ncDM-0.5
Nucleus of the solitary tractcontraSol-0.5
Raphe magnus nucleuscontraRMg-0.5
Raphe obscurus nucleuscontraROb-0.5
Raphe pallidus nucleuscontraRPa-0.5
A2 noradrenergic cellscontraA2-0.5
Ventral respiratory groupcontraVReG-0.5
Nucleus of RollercontraRo-0.5
Paragigantocellular reticular nucleuscontraPGi-0.5
Pre Boetzinger complexcontraPrBo-0.5
Paraventricular hypothalamic nucleus magnocellular divisioncontraPaMag-0.5
Paraventricular hypothalamic nucleus dorsal parvocellular divisioncontraPavPoD-0.5
Paraventricular hypothalamic nucleus parvocellular division ventral partcontraPavPoV-0.5
Paraventricular nucleus medial parvocellular partcontraPaMep-0.5
Intermediate nucleuscontraInM-0.5
Basolateral nucleus of the amygdala magnocellular divisioncontraBLPmc0.5
Parvicellular basolateral nuclear complex of the amygdalacontraBLpc1
Lateral amygdaloid nucleuscontraLA0.5
Central amygdaloid nucleus lateral divisioncontraCeL2
Central amygdaloid nucleus lateral division capsular partcontraCeC0.5
Central amygdaloid nucleus medial divisioncontraCeM2
Locus coeruleusipsiLC-0.5
Parapyramidal nucleusipsiPPy-0.5
Intermediate reticular nucleusipsiIRt-0.5
Rostroventrolateral reticular nucleusipsiRVL-0.5
Pontine reticular nucleusipsiPRN-0.5
Koelliker Fuse nucleusipsiKF-0.5
Lateral parabrachial nucleusipsiLPB-0.5
Gigantocellular reticular nucleusipsiGi-0.5
Medullary reticular nucleus dorsal partipsiMdDd-0.5
Medullary reticular nucleus ventral partipsiMdV-0.5
Parvicellular reticular nucleusipsiPCRt-0.5
Subcoeruleus nucleusipsiSubC-0.5
Ambiguus nucleusipsiAmb-0.5
Area postremaipsiAP-0.5
Facial nucleusipsi7-0.5
Hypoglossal nucleusipsi12S2
Hypoglossal motor nucleusipsi12M-0.5
Ventrolateral portions of the hypoglossal motor nucleusipsi12MVL-0.5
Hypoglossal nucleus ventral partipsi12SV-0.5
Lateral subcompartment of the ventral compartment of the hypoglossal nucleusipsi12SVLsc3
Caudal part of the hypoglossal nucleusipsi12SC-0.5
Ventromedial subnucleus of the hypoglossal nucleusipsi12Sprinvm3
Mediolateral extent of the ventromedial subnucleus of the hypoglossal nucleusipsi12Sprinvme3
Principal hypoglossal nucleus rostrocuadal extentipsi12Sprinrc-0.5
Mesencephalic trigeminal nucleusipsiMe5-0.5
Motor trigeminal nucleusipsiMo5-0.5
Spinal trigeminal nucleusipsiSp5nc-0.5
Dorsomedial part of the spinal trigeminal nucleusipsiSp5ncDM-0.5
Nucleus of the solitary tractipsiSol-0.5
Raphe magnus nucleusipsiRMg-0.5
Raphe obscurus nucleusipsiROb-0.5
Raphe pallidus nucleusipsiRPa-0.5
A2 noradrenergic cellsipsiA2-0.5
Ventral respiratory groupipsiVReG-0.5
Nucleus of RolleripsiRo-0.5
Paragigantocellular reticular nucleusipsiPGi-0.5
Pre Boetzinger complexipsiPrBo-0.5
Substantia innominataipsiSI-0.5
Medial preoptic nucleusipsiMPO-0.5
Ventrolateral preoptic nucleusipsiVLPO-0.5
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag-0.5
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo-0.5
Paraventricular hypothalamic nucleus dorsal parvocellular divisionipsiPavPoD-0.5
Paraventricular nucleus medial parvocellular partipsiPaMep-0.5
Paraventricular hypothalamic nucleus parvocellular division ventral partipsiPavPoV-0.5
Intermediate nucleusipsiInM-0.5
Basolateral nucleus of the amygdala magnocellular divisionipsiBLPmc1
Parvicellular basolateral nuclear complex of the amygdalaipsiBLpc2
Lateral amygdaloid nucleusipsiLA0.5
Bed nucleus of the stria terminalis posterolateral partipsiBSTPL-0.5
Central amygdaloid nucleus lateral divisionipsiCeL2
Central amygdaloid nucleus lateral division capsular partipsiCeC0.5
Central amygdaloid nucleus medial divisionipsiCeM3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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