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Rat connectome



Medial part of posterior thalamic nuclear group left


Abbreviation
PoM
Color       
Superior regionsPosterior thalamic nuclear group

SynonymsAbbr.Language
Medial part of posterior thalamic nuclear groupPoMEng
Posterior medial nucleus Eng
Postero medial thalamic nucleus  
Medial part of posterior thalamic nucleusPomEng

SubregionsSide
Dorsolateral part of the medial part of posterior thalamic nuclear groupleft
Ventromedial part of the medial part of posterior thalamic nuclear groupleft
Ventral part of the medial part of posterior thalamic nuclear groupleft
Lateral part of the medial part of posterior thalamic nuclear groupleft

Output to

NameSideAbbr.WeightDetails
Dorsolateral striatumipsiCPudl3
Primary somatosensory cortex barrel fieldipsiS1BF3

Input from

NameSideAbbr.WeightDetails
Locus coeruleus caudal partipsiLCca2
Locus coeruleus rostral partipsiLCRo2
Spinal trigeminal nucleus interpolar partipsiSp5I2
Dysgranular insular cortexipsiDI1
Dorsal part of the granular insular cortex rostroventrally adjacent to the rostralmost part of S2ipsidGlrvs22
Primary somatosensory cortexipsiS1-0.5
Primary somatosensory cortex barrel fieldipsiS1BF-0.5
Posteromedial barrel septum rows EipsiPMBSRE-0.5
Primary somatosensory cortex barrel field layer 5ipsiS1BF54
Primary somatosensory cortex barrel field layer 5bipsiS1BF5b2
Primary somatosensory cortex barrel field layer 6aipsiS1BF6a1
Primary somatosensory cortex barrel field layer 6bipsiS1BF6b4
Primary somatosensory cortex forelimb region forepawipsiS1FP-0.5
Primary somatosensory cortex hindpaws regionipsiS1HP-0.5
Central dysgranular zone between E4 whisker and forelimb barrel field layers 5ipsiS1BFcdysL53
Central dysgranular zone between E4 whisker and forelimb barrel field layers 6ipsiS1BFcdysL63
Posterior dygranular zone between whisker and trunk representation layer 5ipsiS1pdyL53
Posterior dygranular zone between whisker and trunk representation layer 6ipsiS1pdyL63
Locus coeruleus caudal partcontraLCca1
Locus coeruleus rostral partcontraLCRo1
Dorsal part of the granular insular cortex rostroventrally adjacent to the rostralmost part of S2contradGlrvs20
Lateral cervical nucleus C1contraLatCC1-0.5
Spinal cord layer 5 C1contraSCL5C1-0.5
Spinal cord layer 3 C1contraSCL3C1-0.5
Spinal cord layer 4 C1contraSCL4C1-0.5
Spinal cord layer 1 C1contraSCL1C1-0.5
Spinal cord layer 2 C1contraSCL2C1-0.5
Lateral cervical nucleus C2contraLatCC2-0.5
Spinal cord layer 5 C2contraSCL5C2-0.5
Spinal cord layer 3 C2contraSCL3C2-0.5
Spinal cord layer 4 C2contraSCL4C2-0.5
Spinal cord layer 1 C2contraSCL1C2-0.5
Spinal cord layer 2 C2contraSCL2C2-0.5
Lateral cervical nucleus C3contraLatCC3-0.5
Spinal cord layer 5 C3contraSCL5C3-0.5
Spinal cord layer 3 C3contraSCL3C3-0.5
Spinal cord layer 4 C3contraSCL4C3-0.5
Spinal cord layer 1 C3contraSCL1C3-0.5
Spinal cord layer 2 C3contraSCL2C3-0.5
Lateral cervical nucleus C4contraLatCC4-0.5
Spinal cord layer 5 C4contraSCL5C4-0.5
Spinal cord layer 3 C4contraSCL3C4-0.5
Spinal cord layer 4 C4contraSCL4C4-0.5
Spinal cord layer 1 C4contraSCL1C4-0.5
Spinal cord layer 2 C4contraSCL2C4-0.5
Lateral cervical nucleus C5contraLatCC5-0.5
Spinal cord layer 5 C5contraSCL5C5-0.5
Spinal cord layer 3 C5contraSCL3C5-0.5
Spinal cord layer 4 C5contraSCL4C5-0.5
Spinal cord layer 1 C5contraSCL1C5-0.5
Spinal cord layer 2 C5contraSCL2C5-0.5
Lateral cervical nucleus C6contraLatCC6-0.5
Spinal cord layer 5 C6contraSCL5C6-0.5
Spinal cord layer 3 C6contraSCL3C6-0.5
Spinal cord layer 4 C6contraSCL4C6-0.5
Spinal cord layer 1 C6contraSCL1C6-0.5
Spinal cord layer 2 C6contraSCL2C6-0.5
Lateral cervical nucleus C7contraLatCC7-0.5
Spinal cord layer 5 C7contraSCL5C7-0.5
Spinal cord layer 3 C7contraSCL3C7-0.5
Spinal cord layer 4 C7contraSCL4C7-0.5
Spinal cord layer 1 C7contraSCL1C7-0.5
Spinal cord layer 2 C7contraSCL2C7-0.5
Lateral cervical nucleus C8contraLatCC8-0.5
Spinal cord layer 5 C8contraSCL5C8-0.5
Spinal cord layer 3 C8contraSCL3C8-0.5
Spinal cord layer 4 C8contraSCL4C8-0.5
Spinal cord layer 1 C8contraSCL1C8-0.5
Spinal cord layer 2 C8contraSCL2C8-0.5
Lateral cervical nucleus T1contraLatCT1-0.5
Spinal cord layer 5 T1contraSCL5T1-0.5
Spinal cord layer 3 T1contraSCL3T1-0.5
Spinal cord layer 4 T1contraSCL4T1-0.5
Spinal cord layer 1 T1contraSCL1T1-0.5
Spinal cord layer 2 T1contraSCL2T1-0.5
Lateral cervical nucleus T2contraLatCT2-0.5
Spinal cord layer 5 T2contraSCL5T2-0.5
Spinal cord layer 3 T2contraSCL3T2-0.5
Spinal cord layer 4 T2contraSCL4T2-0.5
Spinal cord layer 1 T2contraSCL1T2-0.5
Spinal cord layer 2 T2contraSCL2T2-0.5
Lateral cervical nucleus T3contraLatCT3-0.5
Spinal cord layer 5 T3contraSCL5T3-0.5
Spinal cord layer 3 T3contraSCL3T3-0.5
Spinal cord layer 4 T3contraSCL4T3-0.5
Spinal cord layer 1 T3contraSCL1T3-0.5
Spinal cord layer 2 T3contraSCL2T3-0.5
Lateral cervical nucleus T4contraLatCT4-0.5
Spinal cord layer 5 T4contraSCL5T4-0.5
Spinal cord layer 3 T4contraSCL3T4-0.5
Spinal cord layer 4 T4contraSCL4T4-0.5
Spinal cord layer 1 T4contraSCL1T4-0.5
Spinal cord layer 2 T4contraSCL2T4-0.5
Lateral cervical nucleus T5contraLatCT5-0.5
Spinal cord layer 5 T5contraSCL5T5-0.5
Spinal cord layer 3 T5contraSCL3T5-0.5
Spinal cord layer 4 T5contraSCL4T5-0.5
Spinal cord layer 1 T5contraSCL1T5-0.5
Spinal cord layer 2 T5contraSCL2T5-0.5
Lateral cervical nucleus T6contraLatCT6-0.5
Spinal cord layer 5 T6contraSCL5T6-0.5
Spinal cord layer 3 T6contraSCL3T6-0.5
Spinal cord layer 4 T6contraSCL4T6-0.5
Spinal cord layer 1 T6contraSCL1T6-0.5
Spinal cord layer 2 T6contraSCL2T6-0.5
Lateral cervical nucleus T7contraLatCT7-0.5
Spinal cord layer 5 T7contraSCL5T7-0.5
Spinal cord layer 3 T7contraSCL3T7-0.5
Spinal cord layer 1 T7contraSCL1T7-0.5
Spinal cord layer 4 T7contraSCL4T7-0.5
Spinal cord layer 2 T7contraSCL2T7-0.5
Lateral cervical nucleus T8contraLatCT8-0.5
Spinal cord layer 5 T8contraSCL5T8-0.5
Spinal cord layer 3 T8contraSCL3T8-0.5
Spinal cord layer 4 T8contraSCL4T8-0.5
Spinal cord layer 1 T8contraSCL1T8-0.5
Spinal cord layer 2 T8contraSCL2T8-0.5
Lateral cervical nucleus T9contraLatCT9-0.5
Spinal cord layer 5 T9contraSCL5T9-0.5
Spinal cord layer 3 T9contraSCL3T9-0.5
Spinal cord layer 4 T9contraSCL4T9-0.5
Spinal cord layer 1 T9contraSCL1T9-0.5
Spinal cord layer 2 T9contraSCL2T9-0.5
Lateral cervical nucleus T10contraLatCT10-0.5
Spinal cord layer 5 T10contraSCL5T10-0.5
Spinal cord layer 3 T10contraSCL3T10-0.5
Spinal cord layer 4 T10contraSCL4T10-0.5
Spinal cord layer 1 T10contraSCL1T10-0.5
Spinal cord layer 2 T10contraSCL2T10-0.5
Lateral cervical nucleus T11contraLatCT11-0.5
Spinal cord layer 5 T11contraSCL5T11-0.5
Spinal cord layer 3 T11contraSCL3T11-0.5
Spinal cord layer 4 T11contraSCL4T11-0.5
Spinal cord layer 1 T11contraSCL1T11-0.5
Spinal cord layer 2 T11contraSCL2T11-0.5
Lateral cervical nucleus T12contraLatCT12-0.5
Spinal cord layer 5 T12contraSCL5T12-0.5
Spinal cord layer 3 T12contraSCL3T12-0.5
Spinal cord layer 4 T12contraSCL4T12-0.5
Spinal cord layer 1 T12contraSCL1T12-0.5
Spinal cord layer 2 T12contraSCL2T12-0.5
Lateral cervical nucleus T13contraLatCT13-0.5
Spinal cord layer 5 T13contraSCL5T13-0.5
Spinal cord layer 3 T13contraSCL3T13-0.5
Spinal cord layer 4 T13contraSCL4T13-0.5
Spinal cord layer 1 T13contraSCL1T13-0.5
Spinal cord layer 2 T13contraSCL2T13-0.5
Lateral cervical nucleus L1contraLatCL1-0.5
Spinal cord layer 5 L1contraSCL5L1-0.5
Spinal cord layer 3 L1contraSCL3L1-0.5
Spinal cord layer 4 L1contraSCL4L1-0.5
Spinal cord layer 1 L1contraSCL1L1-0.5
Spinal cord layer 2 L1contraSCL2L1-0.5
Lateral cervical nucleus L2contraLatCL2-0.5
Spinal cord layer 5 L2contraSCL5L2-0.5
Spinal cord layer 3 L2contraSCL3L2-0.5
Spinal cord layer 4 L2contraSCL4L2-0.5
Spinal cord layer 1 L2contraSCL1L2-0.5
Spinal cord layer 2 L2contraSCL2L2-0.5
Lateral cervical nucleus L3contraLatCL3-0.5
Spinal cord layer 5 L3contraSCL5L3-0.5
Spinal cord layer 3 L3contraSCL3L3-0.5
Spinal cord layer 4 L3contraSCL4L3-0.5
Spinal cord layer 1 L3contraSCL1L3-0.5
Spinal cord layer 2 L3contraSCL2L3-0.5
Lateral cervical nucleus L4contraLatCL4-0.5
Spinal cord layer 5 L4contraSCL5L4-0.5
Spinal cord layer 3 L4contraSCL3L4-0.5
Spinal cord layer 4 L4contraSCL4L4-0.5
Spinal cord layer 1 L4contraSCL1L4-0.5
Spinal cord layer 2 L4contraSCL2L4-0.5
Lateral cervical nucleus L5contraLatCL5-0.5
Spinal cord layer 5 L5contraSCL5L5-0.5
Spinal cord layer 3 L5contraSCL3L5-0.5
Spinal cord layer 4 L5contraSCL4L5-0.5
Spinal cord layer 1 L5contraSCL1L5-0.5
Spinal cord layer 2 L5contraSCL2L5-0.5
Lateral cervical nucleus L6contraLatCL6-0.5
Spinal cord layer 5 L6contraSCL5L6-0.5
Spinal cord layer 3 L6contraSCL3L6-0.5
Spinal cord layer 4 L6contraSCL4L6-0.5
Spinal cord layer 1 L6contraSCL1L6-0.5
Spinal cord layer 2 L6contraSCL2L6-0.5
Lateral cervical nucleus S1contraLatCS1-0.5
Spinal cord layer 5 S1contraSCL5S1-0.5
Spinal cord layer 3 S1contraSCL3S1-0.5
Spinal cord layer 4 S1contraSCL4S1-0.5
Spinal cord layer 1 S1contraSCL1S1-0.5
Spinal cord layer 2 S1contraSCL2S1-0.5
Lateral cervical nucleus S2contraLatCS2-0.5
Spinal cord layer 5 S2contraSCL5S2-0.5
Spinal cord layer 3 S2contraSCL3S2-0.5
Spinal cord layer 4 S2contraSCL4S2-0.5
Spinal cord layer 1 S2contraSCL1S2-0.5
Spinal cord layer 2 S2contraSCL2S2-0.5
Lateral cervical nucleus S3contraLatCS3-0.5
Spinal cord layer 5 S3contraSCL5S3-0.5
Spinal cord layer 3 S3contraSCL3S3-0.5
Spinal cord layer 4 S3contraSCL4S3-0.5
Spinal cord layer 1 S3contraSCL1S3-0.5
Spinal cord layer 2 S3contraSCL2S3-0.5
Lateral cervical nucleus S4contraLatCS4-0.5
Spinal cord layer 5 S4contraSCL5S4-0.5
Spinal cord layer 3 S4contraSCL3S4-0.5
Spinal cord layer 4 S4contraSCL4S4-0.5
Spinal cord layer 1 S4contraSCL1S4-0.5
Spinal cord layer 2 S4contraSCL2S4-0.5
Lateral cervical nucleus Co1contraLatCCo1-0.5
Lateral cervical nucleus Co2contraLatCCo2-0.5
Lateral cervical nucleus Co3contraLatCCo3-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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