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Rat connectome



Spinal cord layer 4 C4 right


Abbreviation
SCL4C4
Color       
Superior regionsNucleus proprius C4

SynonymsAbbr.Language
Spinal cord layer 4 C4SCL4C4Eng

Output to

NameSideAbbr.WeightDetails
MesencephaloncontraMEC0.5
Nucleus of DarkschewitschcontraDk-0.5
Oculomotor nucleuscontra3-0.5
Periaqueductal graycontraPAG-0.5
Lateral periaqueductal graycontraLPAG3
Periaqueductal gray dorsal partcontraPAGd1
Periaqueductal gray lateroventral partcontraPAGLV1
Ventrolateral periaqueductal graycontraVLPAG2
Red nucleuscontraR-0.5
Intercollicular nucleuscontraInCo-0.5
Superior colliculuscontraSC-0.5
Edinger Westphal nucleuscontraEW-0.5
Interstitial nucleus of CajalcontraInC-0.5
Magnocellular reticular nucleuscontraNRMC3
Mesencephalic reticular formationcontraMRF-0.5
Deep mesencephalic nucleuscontraDpMe1
Cuneiforme nucleuscontraCnF3
Parabrachial nucleuscontraPB2
Lateral parabrachial nucleus lateral partcontraLPBL1
Parabrachial nucleus central lateral partcontraPBCeL1
Parabrachial nucleus dorsolateral partcontraPBDL1
Parabrachial nucleus superior lateralcontraPBSL1
Gigantocellular reticular nucleuscontraGi3
Lateral reticular nucleuscontraLRt3
Caudomedial part of the lateral reticular nucleuscontraLRtcm0.5
Medullary reticular nucleus dorsal partcontraMdDd2
Spinal vestibular nucleuscontraSpVe-0.5
Medial vestibular nucleus caudal partcontraMVeP-0.5
Medial vestibular nucleus magnocellular partcontraMVeMC-0.5
Medial vestibular nucleus parvicellular partcontraMVePC-0.5
Lateral vestibular nucleuscontraLVe-0.5
Nucleus of the solitary tractcontraSol3
Nucleus of the solitary tract lateral partcontraSolL2
Nucleus of the solitary tract medial partcontraSolM2
Caudal ventrolateral medullacontraCVLM1
Caudal ventrolateral medulla lateral partcontraCVLMl2
A1 noradrenergic cellscontraA13
A2 noradrenergic cellscontraA22
Dorsal column nucleicontraDCN0.5
Cuneate nucleuscontraCu-0.5
Lateral paragigantocellular nucleuscontraLPGi-0.5
Paragigantocellular reticular nucleus medial partcontraPGiM-0.5
Lateral hypothalamic areacontraLH3
Dorsal hypothalamic areacontraDA3
Dorsomedial hypothalamic nucleus [Medial zone]contraDM3
Paraventricular hypothalamic nucleuscontraPa3
Suprachiasmatic nucleuscontraSCh3
Supraoptic nucleus [Supraoptic region]contraSO3
Centrolateral thalamic nucleuscontraCL-0.5
Lateral group of the dorsal thalamuscontraLAT1.5
Posterior thalamic nuclear groupcontraPo2
Medial part of posterior thalamic nuclear groupcontraPoM-0.5
Posterior thalamic nuclear group triangular partcontraPoT2
Mediodorsal thalamic nucleuscontraMD2
Submedius thalamic nucleuscontraSub1
Ventral posterolateral thalamic nucleuscontraVPL-0.5
Ventral posterolateral thalamic nucleus parvicellular partcontraVPLpc-0.5
Intralaminar nucleicontraILN-0.5
Medial thalamic zonecontraMTZ-0.5
Pretectal regioncontraPRT-0.5
Anterior pretectal nucleuscontraAPT-0.5
Posterior pretectal nucleuscontraPPT-0.5
Dorsolateral funiculuscontradlft-2
Spinothalamic tractcontrastt-2
Accumbens nucleuscontraAc2
Septal regioncontraSER2
Ventral funiculuscontravf-2
Ventrolateral funiculuscontravLF-2
Cervical segment 1contraCS11
Cervical segment 2contraCS21
Cervical segment 3contraCS31
Cervical segment 4contraCS41
Cervical segment 5contraCS51
Cervical segment 6contraCS61
Cervical segment 7contraCS71
Cervical segment 8contraCS81
Thoracal segment 1contraT11
Thoracal segment 2contraT21
Spinal cord layers T2contraSCLT21
Thoracal segment 3contraT31
Thoracal segment 4contraT41
Thoracal segment 5contraT51
Thoracal segment 6contraT61
Thoracal segment 7contraT71
Thoracal segment 8contraT81
Thoracal segment 9contraT91
Thoracal segment 10contraT101
Thoracal segment 11contraT111
Thoracal segment 12contraT121
Thoracal segment 13contraT131
Lumbar segmentscontraLSeg1.5
Lumbar segment 1contraL11
Spinal cord layer 9 L1contraSCL9L10.5
Lumbar segment 2contraL21
Spinal cord layer 9 L2contraSCL9L20.5
Lumbar segment 3contraL31
Spinal cord layer 9 L3contraSCL9L30.5
Lumbar segment 4contraL41
Lumbar segment 5contraL51
Lumbar segment 6contraL61
Sacral segment 1contraSa11
Sacral segment 2contraSa21
Sacral segment 3contraSa31
Sacral segment 4contraSa41
Lateral periaqueductal grayipsiLPAG2
Periaqueductal gray lateroventral partipsiPAGLV0.5
Ventrolateral periaqueductal grayipsiVLPAG2
Dorsal reticular formationipsiDRF-0.5
Magnocellular reticular nucleusipsiNRMC1
Cuneiforme nucleusipsiCnF1.5
Parabrachial nucleusipsiPB1.5
Lateral parabrachial nucleus internal partipsiLPBI2
Lateral parabrachial nucleus lateral partipsiLPBL1
Parabrachial nucleus central lateral partipsiPBCeL0
Parabrachial nucleus dorsolateral partipsiPBDL0
Parabrachial nucleus superior lateralipsiPBSL0
Gigantocellular reticular nucleusipsiGi2
Lateral reticular nucleusipsiLRt2
Caudal part to the midportion of the lateral reticular nucleusipsiCaLRtMp2
Caudomedial part of the lateral reticular nucleusipsiLRtcm2
Caudal third of the caudomedial part of the lateral reticular nucleusipsiLRtcmCt2
Subnucleus reticularis dorsalisipsiSRD3
Medullary reticular nucleus dorsal partipsiMdDd3
Dorsal part of the medullary reticular nucleus dorsal partipsidMdDd3
Spinal vestibular nucleusipsiSpVe-0.5
Medial vestibular nucleus caudal partipsiMVeP-0.5
Medial vestibular nucleus magnocellular partipsiMVeMC-0.5
Medial vestibular nucleus parvicellular partipsiMVePC-0.5
Lateral vestibular nucleusipsiLVe-0.5
Nucleus of the solitary tractipsiSol1
Nucleus of the solitary tract caudal partipsiSolca-0.5
Nucleus of the solitary tract commissural partipsiSolC-0.5
Medial part of the commissural subnucleusipsiMSolC-0.5
Nucleus of the solitary tract lateral partipsiSolL3
Nucleus of the solitary tract medial partipsiSolM2
Caudal ventrolateral medullaipsiCVLM1
Caudal ventrolateral medulla lateral partipsiCVLMl3
A1 noradrenergic cellsipsiA11
A2 noradrenergic cellsipsiA20.5
Dorsal column nucleiipsiDCN3
Cuneate nucleusipsiCu-0.5
Gracile nucleus principal partipsiGr-0.5
Lateral paragigantocellular nucleusipsiLPGi2
Paragigantocellular reticular nucleus medial partipsiPGiM-0.5
Dorsal regionipsiDHR-0.5
Lateral hypothalamic areaipsiLH1.5
Dorsal hypothalamic areaipsiDA1.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1.5
Posterior hypothalamic areaipsiPHA-0.5
Paraventricular hypothalamic nucleusipsiPa1.5
Suprachiasmatic nucleusipsiSCh1.5
Supraoptic nucleus [Supraoptic region]ipsiSO1.5
Lateral group of the dorsal thalamusipsiLAT0
Ventrobasal complexipsiVB1
Medial thalamic zoneipsiMTZ0
Spinothalamic tractipsistt-2
TelencephalonipsiTEL-0.5
Amygdaloid complexipsiAC-0.5
Basal gangliaipsiBG-0.5
Accumbens nucleusipsiAc1
Infralimbic cortexipsiIL-0.5
Medial orbital cortexipsiMO-0.5
Septal regionipsiSER1
Cervical segment 1ipsiCS13
Lateral cervical nucleus C1ipsiLatCC1-0.5
Cervical segment 2ipsiCS23
Lateral cervical nucleus C2ipsiLatCC2-0.5
Interneuron groups of layer 9 C2ipsiiGL9C2-0.5
Motoneuron groups of layer 9 C2ipsiMGL9C2-0.5
Cervical segment 3ipsiCS33
Lateral cervical nucleus C3ipsiLatCC3-0.5
Interneuron groups of layer 9 C3ipsiiGL9C3-0.5
Motoneuron groups of layer 9 C3ipsiMGL9C3-0.5
Cervical segment 4ipsiCS43
Lateral cervical nucleus C4ipsiLatCC4-0.5
Interneuron groups of layer 9 C4ipsiiGL9C4-0.5
Motoneuron groups of layer 9 C4ipsiMGL9C4-0.5
Cervical segment 5ipsiCS53
Motoneuron groups of layer 9 C5ipsiMGL9C5-0.5
Cervical segment 6ipsiCS63
Interneuron groups of layer 9 C5ipsiiGL9C5-0.5
Motoneuron groups of layer 9 C6ipsiMGL9C6-0.5
Cervical segment 7ipsiCS73
Interneuron groups of layer 9 C6ipsiiGL9C6-0.5
Cervical segment 8ipsiCS83
Thoracal segment 1ipsiT13
Thoracal segment 2ipsiT23
Spinal cord layers T2ipsiSCLT23
Thoracal segment 3ipsiT33
Thoracal segment 4ipsiT43
Thoracal segment 5ipsiT53
Thoracal segment 6ipsiT63
Thoracal segment 7ipsiT73
Thoracal segment 8ipsiT83
Thoracal segment 9ipsiT93
Thoracal segment 10ipsiT103
Thoracal segment 11ipsiT113
Thoracal segment 12ipsiT123
Thoracal segment 13ipsiT133
Lumbar segmentsipsiLSeg1.5
Lumbar segment 1ipsiL13
Spinal cord layer 5 L1ipsiSCL5L1-0.5
Spinal cord layer 4 L1ipsiSCL4L1-0.5
Spinal cord layer 7 L1ipsiSCL7L1-0.5
Spinal cord layer 8 L1ipsiSCL8L1-0.5
Spinal cord layer 9 L1ipsiSCL9L11
Lumbar segment 2ipsiL23
Spinal cord layer 5 L2ipsiSCL5L2-0.5
Spinal cord layer 4 L2ipsiSCL4L2-0.5
Spinal cord layer 7 L2ipsiSCL7L2-0.5
Spinal cord layer 8 L2ipsiSCL8L2-0.5
Spinal cord layer 9 L2ipsiSCL9L21
Lumbar segment 3ipsiL33
Spinal cord layer 5 L3ipsiSCL5L3-0.5
Spinal cord layer 4 L3ipsiSCL4L3-0.5
Spinal cord layer 7 L3ipsiSCL7L3-0.5
Spinal cord layer 8 L3ipsiSCL8L3-0.5
Spinal cord layer 9 L3ipsiSCL9L31
Lumbar segment 4ipsiL43
Spinal cord layer 5 L4ipsiSCL5L4-0.5
Spinal cord layer 4 L4ipsiSCL4L4-0.5
Spinal cord layer 7 L4ipsiSCL7L4-0.5
Spinal cord layer 8 L4ipsiSCL8L4-0.5
Lumbar segment 5ipsiL53
Spinal cord layer 5 L5ipsiSCL5L5-0.5
Spinal cord layer 4 L5ipsiSCL4L5-0.5
Spinal cord layer 7 L5ipsiSCL7L5-0.5
Spinal cord layer 8 L5ipsiSCL8L5-0.5
Spinal nucleus of the bulbocavernosus lumbal segment 5ipsiBCL51
Lumbar segment 6ipsiL63
Spinal cord layer 5 L6ipsiSCL5L6-0.5
Spinal cord layer 4 L6ipsiSCL4L6-0.5
Spinal cord layer 7 L6ipsiSCL7L6-0.5
Spinal cord layer 8 L6ipsiSCL8L6-0.5
Spinal nucleus of the bulbocavernosus lumbal segment 6ipsiBCL61
Sacral segment 1ipsiSa13
Spinal cord layer 5 S1ipsiSCL5S1-0.5
Spinal cord layer 4 S1ipsiSCL4S1-0.5
Spinal cord layer 7 S1ipsiSCL7S1-0.5
Spinal cord layer 8 S1ipsiSCL8S1-0.5
Sacral segment 2ipsiSa23
Spinal cord layer 5 S2ipsiSCL5S2-0.5
Spinal cord layer 4 S2ipsiSCL4S2-0.5
Spinal cord layer 7 S2ipsiSCL7S2-0.5
Spinal cord layer 8 S2ipsiSCL8S2-0.5
Sacral segment 3ipsiSa33
Spinal cord layer 5 S3ipsiSCL5S3-0.5
Spinal cord layer 4 S3ipsiSCL4S3-0.5
Spinal cord layer 7 S3ipsiSCL7S3-0.5
Spinal cord layer 8 S3ipsiSCL8S3-0.5
Sacral segment 4ipsiSa43
Spinal cord layer 5 S4ipsiSCL5S4-0.5
Spinal cord layer 4 S4ipsiSCL4S4-0.5
Spinal cord layer 7 S4ipsiSCL7S4-0.5
Spinal cord layer 8 S4ipsiSCL8S4-0.5

Input from

NameSideAbbr.WeightDetails
Superior colliculus lateral partcontraSCL-0.5
Pedunculopontine tegmental nucleuscontraPPTg3
A4 noradrenaline cellscontraA40
A5 noradrenaline cellscontraA51
A7 noradrenaline cellscontraA71
Locus coeruleuscontraLC3
Caudal part of ventral locus coeruleuscontraLCveca0.5
Magnocellular reticular nucleuscontraNRMC-0.5
Rostroventrolateral reticular nucleuscontraRVL-0.5
Cuneiforme nucleuscontraCnF-2
Gigantocellular reticular nucleuscontraGi0.5
Medullary reticular nucleus dorsal partcontraMdDd3
Ventral part of the medullary reticular nucleus dorsal partcontravMdDd3
Medullary reticular nucleus ventral partcontraMdV3
Subcoeruleus nucleuscontraSubC1
C2 adrenaline cellscontraC20
Spinal trigeminal nucleus caudal partcontraSp5C0
Medial vestibular nucleus caudal partcontraMVeP3
Nucleus of the solitary tractcontraSol2
Nucleus of the solitary tract commissural partcontraSolC-0.5
Caudal ventrolateral medulla lateral partcontraCVLMl2
Lateral most portion of the ventrolateral medullacontraLMVL-0.5
A1 noradrenergic cellscontraA11
A2 noradrenergic cellscontraA21
Cuneate nucleuscontraCu0.5
Nucleus interfascicularis hypoglossicontraNIFH1
Rostral part of the ventromedial medulla oblongatacontraRMeObvm4
Zona incerta medial partcontraZIm-0.5
Dorsolateral funiculuscontradlft-2
Frontal cortex area 2contraFr23
Parietal association cortexcontraPtA0.5
Insular cortexcontraICX0.5
Prefrontal cortexcontraPFC0.5
Lateral agranular prefrontal cortexcontraAGl3
Forelimb motor cortexcontraFMCx3
Lateral agranular prefrontal cortex layer 5contraAGlL5-0.5
Medial agranular prefrontal cortex rostral partcontrarAGm-0.5
Medial agranular prefrontal cortex rostral part layer 5contrarAGmL5-0.5
Primary somatosensory cortexcontraS13
Primary somatosensory cortex layer 5contraS1L5-0.5
Primary somatosensory cortex forelimb regioncontraS1FL3
Secondary somatosensory cortexcontraS23
Secondary somatosensory cortex layer 5contraS2L5-0.5
Secondary visual cortexcontraV20.5
Thoracal segment 4contraT4-0.5
Thoracal segment 5contraT5-0.5
Thoracal segment 6contraT6-0.5
Thoracal segment 7contraT7-0.5
Thoracal segment 8contraT8-0.5
Thoracal segment 9contraT9-0.5
Thoracal segment 10contraT10-0.5
Thoracal segment 11contraT11-0.5
Thoracal segment 12contraT12-0.5
Thoracal segment 13contraT13-0.5
Lumbar segment 1contraL1-0.5
Lumbar segment 2contraL2-0.5
Lumbar segment 3contraL3-0.5
Lumbar segment 4contraL4-0.5
Lumbar segment 5contraL5-0.5
Lumbar segment 6contraL6-0.5
Sacral segment 1contraSa1-0.5
Sacral segment 2contraSa2-0.5
Sacral segment 3contraSa3-0.5
Sacral segment 4contraSa4-0.5
Coccygeal segment 1contraCo1-0.5
Central grayipsiCG1
Red nucleus magnocellular partipsiRMC3
Pedunculopontine tegmental nucleusipsiPPTg3
Interstitial nucleus of CajalipsiInC-0.5
A4 noradrenaline cellsipsiA40
A5 noradrenaline cellsipsiA53
A7 noradrenaline cellsipsiA73
Locus coeruleusipsiLC3
Caudal part of ventral locus coeruleusipsiLCveca0.5
Parapyramidal nucleusipsiPPy3
Magnocellular reticular nucleusipsiNRMC-0.5
Rostroventrolateral reticular nucleusipsiRVL1
Ventrolateral reticular formationipsiVLRF-0.5
Deep mesencephalic nucleusipsiDpMe-0.5
Dorsolateral pontine reticular formationipsiPRNDL1
Koelliker Fuse nucleusipsiKF2
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe1
Gigantocellular reticular nucleusipsiGi1
Medullary reticular nucleus dorsal partipsiMdDd4
Dorsal part of the medullary reticular nucleus dorsal partipsidMdDd-0.5
Ventral part of the medullary reticular nucleus dorsal partipsivMdDd4
Medullary reticular nucleus ventral partipsiMdV4
Subcoeruleus nucleusipsiSubC3
C2 adrenaline cellsipsiC20
Boetzinger complexipsiBo0
Spinal trigeminal nucleus caudal partipsiSp5C2
Mandibular region of the trigeminal ganglionipsi5GnMa0.5
Medial vestibular nucleus caudal partipsiMVeP3
Nucleus of the solitary tractipsiSol2
Nucleus of the solitary tract commissural partipsiSolC1
Raphe magnus nucleusipsiRMg-0.5
Caudal ventrolateral medulla lateral partipsiCVLMl3
Lateral part of the caudal ventrolateral medullaipsiLCVLM1
Lateral most portion of the ventrolateral medullaipsiLMVL-0.5
A1 noradrenergic cellsipsiA11
A2 noradrenergic cellsipsiA21
Cuneate nucleusipsiCu1
Cuneate nucleus dorsal partipsiCuD-0.5
External cuneate nucleusipsiECu-0.5
Rostral part of the ventromedial medulla oblongataipsiRMeObvm4
Lateral hypothalamic areaipsiLH1
A11 dopamine cellsipsiA11-0.5
Zona incertaipsiZI-0.5
Zona incerta medial partipsiZIm-0.5
Zona incerta rostromedial partipsiZIrm0
Somatomotoric regionsipsiSMR-0.5
Lateral agranular prefrontal cortexipsiAGl3
Medial agranular prefrontal cortexipsiAGm3
Primary somatosensory cortexipsiS13
Primary somatosensory cortex forelimb regionipsiS1FL1
Secondary somatosensory cortexipsiS23
Dorsal root ganglion C2ipsiDRGC2-0.5
Dorsal root ganglion C3ipsiDRGC3-0.5
Dorsal root ganglion C4ipsiDRGC4-0.5
Dorsal root ganglion C6ipsiDRGC6-0.5
Dorsal root ganglion C7ipsiDRGC73
Area X T1ipsiSCL10T1-0.5
Spinal cord layer 5 T1ipsiSCL5T1-0.5
Spinal cord layer 6 T1ipsiSCL6T1-0.5
Spinal cord layer 3 T1ipsiSCL3T1-0.5
Spinal cord layer 4 T1ipsiSCL4T1-0.5
Spinal cord layer 1 T1ipsiSCL1T1-0.5
Spinal cord layer 2 T1ipsiSCL2T1-0.5
Spinal cord layer 7 T1ipsiSCL7T1-0.5
Spinal cord layer 8 T1ipsiSCL8T1-0.5
Thoracal segment 4ipsiT4-0.5
Thoracal segment 5ipsiT5-0.5
Thoracal segment 6ipsiT6-0.5
Thoracal segment 7ipsiT7-0.5
Thoracal segment 8ipsiT8-0.5
Thoracal segment 9ipsiT9-0.5
Thoracal segment 10ipsiT10-0.5
Thoracal segment 11ipsiT11-0.5
Thoracal segment 12ipsiT12-0.5
Thoracal segment 13ipsiT13-0.5
Lumbar segment 1ipsiL1-0.5
Lumbar segment 2ipsiL2-0.5
Lumbar segment 3ipsiL3-0.5
Lumbar segment 4ipsiL4-0.5
Lumbar segment 5ipsiL5-0.5
Lumbar segment 6ipsiL6-0.5
Sacral segment 1ipsiSa1-0.5
Sacral segment 2ipsiSa2-0.5
Sacral segment 3ipsiSa3-0.5
Sacral segment 4ipsiSa4-0.5
Coccygeal segment 1ipsiCo1-0.5
Greater occipital nerveipsiPNSgo-0.5
Median nerveipsimen3
Phrenic nerveipsiphren-0.5
Ulnar nerveipsiuln-0.5
Forelimb extensor digitorum communisipsiMuscFoEDC2
Splenius capitis muscleipsiMuscSpCa-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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