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Rat connectome



Spinal cord layer 8 L5 right


Abbreviation
SCL8L5
Color       
Superior regionsIntermediate zone L5

SynonymsAbbr.Language
Spinal cord layer 8 L5SCL8L5Eng

SubregionsSide
Quadriceps interneurons of spinal cord layer 8 L5right
Posterior biceps interneurons of spinal cord layer 8 L5right

Output to

NameSideAbbr.WeightDetails
MesencephaloncontraMEC3
Nucleus of DarkschewitschcontraDk-0.5
Oculomotor nucleuscontra3-0.5
Periaqueductal graycontraPAG-0.5
Dorsal periaqueductal graycontraDPAG3
Dorsolateral periaqueductal graycontraDLPAG3
Lateral periaqueductal graycontraLPAG3
Ventrolateral periaqueductal graycontraVLPAG3
Intercollicular nucleuscontraInCo-0.5
Superior colliculuscontraSC-0.5
Superior colliculus intermediate layerscontraSCi-0.5
Superior colliculus deep layerscontraSCd-0.5
Edinger Westphal nucleuscontraEW-0.5
Interstitial nucleus of CajalcontraInC-0.5
Ansiform lobule crus 1contraCrus11
Simple lobulecontraSim1
Paravermal region of anterior lobecontraPVAnL1
Reticular systemcontraRF3
Magnocellular reticular nucleuscontraNRMC-0.5
Medial reticular formationcontraRFm-0.5
Ventral part of the medial reticular formationcontraRFmV-0.5
Pontine reticular nucleus oral partcontraPnO3
Cuneiforme nucleuscontraCnF2
Parabrachial nucleuscontraPB2
Lateral parabrachial nucleuscontraLPB0.5
Lateral parabrachial nucleus lateral partcontraLPBL1
Parabrachial nucleus central lateral partcontraPBCeL1
Parabrachial nucleus dorsolateral partcontraPBDL1
Parabrachial nucleus superior lateralcontraPBSL1
Gigantocellular reticular nucleuscontraGi3
Gigantocellular reticular nucleus lateral partcontraGirL3
Lateral reticular nucleuscontraLRt3
Caudal part to the midportion of the lateral reticular nucleuscontraCaLRtMp-0.5
Caudomedial part of the lateral reticular nucleuscontraLRtcm-0.5
Caudal third of the caudomedial part of the lateral reticular nucleuscontraLRtcmCt-0.5
Lateral reticular nucleus lateral partcontraLRtL-0.5
Lateral reticular nucleus rostral partcontraLRtr2
Medullary reticular nucleuscontraMdD-0.5
Subnucleus reticularis ventralis medullae oblongataecontraSRV-0.5
Parvicellular reticular nucleuscontraPCRt-0.5
Spinal vestibular nucleuscontraSpVe-0.5
Vestibular nucleicontraVnc3
Nucleus of the solitary tractcontraSol3
Inferior olive dorsal nucleuscontraIOD3
Paragigantocellular reticular nucleuscontraPGi3
Lateral paragigantocellular nucleuscontraLPGi-0.5
Paragigantocellular reticular nucleus medial partcontraPGiM-0.5
HypothalamuscontraHYPO3
ThalamuscontraT3
Anteroventral thalamic nucleuscontraAV-0.5
Centrolateral thalamic nucleuscontraCL3
Lateral group of the dorsal thalamuscontraLAT1.5
Lateral anterior nucleus of the dorsal thalamuscontraLAAT-0.5
Posterior thalamic nuclear groupcontraPo-0.5
Posterior thalamic nuclear group medial partcontraPoMe-0.5
Mediodorsal thalamic nucleuscontraMD-0.5
Ventrolateral thalamic nucleuscontraVL-0.5
Ventrobasal complexcontraVB3
Ventral posterolateral thalamic nucleuscontraVPL-0.5
Ventral posteromedial thalamic nucleuscontraVPM-0.5
Ventromedial thalamic nucleuscontraVM-0.5
Lateral posterior thalamic nucleuscontraLP-0.5
Posterior groupcontraPTG3
Pretectal regioncontraPRT-0.5
Anterior pretectal nucleuscontraAPT-0.5
Lateral funiculuscontralf-2
Ventral funiculuscontravf-2
Cervical segment 1contraCS11.5
Ventral horn C1contraVHC14
Cervical segment 2contraCS21.5
Ventral horn C2contraVHC24
Cervical segment 3contraCS31.5
Ventral horn C3contraVHC34
Cervical segment 4contraCS41.5
Cervical segment 5contraCS51.5
Cervical segment 6contraCS61.5
Area X C6contraSCL10C6-0.5
Spinal cord layer 7 C6contraSCL7C63
Spinal cord layer 8 C6contraSCL8C63
Cervical segment 7contraCS71.5
Area X C7contraSCL10C7-0.5
Spinal cord layer 7 C7contraSCL7C73
Spinal cord layer 8 C7contraSCL8C73
Spinal cord layer 9 C7contraSCL9C7-0.5
Cervical segment 8contraCS81.5
Thoracal segment 1contraT11.5
Thoracal segment 2contraT21.5
Thoracal segment 3contraT31.5
Thoracal segment 4contraT41.5
Thoracal segment 5contraT51.5
Thoracal segment 6contraT61.5
Thoracal segment 7contraT71.5
Thoracal segment 8contraT81.5
Thoracal segment 9contraT91.5
Area X T9contraSCL10T9-0.5
Spinal cord layer 7 T9contraSCL7T93
Spinal cord layer 8 T9contraSCL8T93
Thoracal segment 10contraT101.5
Thoracal segment 11contraT111.5
Thoracal segment 12contraT121.5
Thoracal segment 13contraT131.5
Lumbar segment 1contraL11.5
Medial motoneuron groups of layer 9 L1contraMGL9L1m3
Lateral motoneuron groups of layer 9 L1contraMGL9L1L3
Lumbar segment 2contraL21.5
Lumbar segment 3contraL31.5
Medial motoneuron groups of layer 9 L3contraMGL9L3m3
Lateral motoneuron groups of layer 9 L3contraMGL9L3L3
Lumbar segment 4contraL41.5
Area X L4contraSCL10L41
Spinal cord layer 8 L4contraSCL8L41
Lumbar segment 5contraL51.5
Lumbar segment 6contraL61.5
Sacral segment 1contraSa13
Sacral segment 2contraSa23
Sacral segment 3contraSa33
Sacral segment 4contraSa43
Coccygeal segment 1contraCo13
Coccygeal segment 2contraCo23
MesencephalonipsiMEC3
Periaqueductal grayipsiPAG3
Dorsal periaqueductal grayipsiDPAG1
Dorsolateral periaqueductal grayipsiDLPAG1
Lateral periaqueductal grayipsiLPAG1
Ventrolateral periaqueductal grayipsiVLPAG2
Posterior lobe of the cerebellumipsiCERCPL1
Ansiform lobule crus 1ipsiCrus11
Simple lobuleipsiSim1
Anterior lobeipsiAnL3
Paravermal region of anterior lobeipsiPVAnL1
Reticular systemipsiRF3
Magnocellular reticular nucleusipsiNRMC-0.5
Medial reticular formationipsiRFm3
Ventral part of the medial reticular formationipsiRFmV-0.5
Medial pontomedullary reticular formationipsiMPomRF-0.5
Pontine reticular nucleus oral partipsiPnO1
Cuneiforme nucleusipsiCnF3
Parabrachial nucleusipsiPB3
Lateral parabrachial nucleusipsiLPB0.5
Lateral parabrachial nucleus lateral partipsiLPBL0
Parabrachial nucleus central lateral partipsiPBCeL0
Parabrachial nucleus dorsolateral partipsiPBDL0
Parabrachial nucleus superior lateralipsiPBSL0
Caudal bulbar reticular formationipsiCBRF-0.5
Gigantocellular reticular nucleusipsiGi1
Lateral reticular nucleusipsiLRt3
Caudal part to the midportion of the lateral reticular nucleusipsiCaLRtMp-0.5
Caudal third of the caudomedial part of the lateral reticular nucleusipsiLRtcmCt-0.5
Medullary reticular nucleusipsiMdD-0.5
Subnucleus reticularis ventralis medullae oblongataeipsiSRV-0.5
Medullary reticular nucleus dorsal partipsiMdDd-0.5
Parvicellular reticular nucleusipsiPCRt-0.5
Spinal vestibular nucleusipsiSpVe-0.5
Vestibular nucleiipsiVnc1
Nucleus of the solitary tractipsiSol3
Rostral ventrolateral medullaipsiRVLM1
GracileipsiGra-0.5
Inferior olive dorsal nucleusipsiIOD1
Inferior olive dorsal nucleus rostral partipsiIODR3
Paragigantocellular reticular nucleusipsiPGi1
Lateral paragigantocellular nucleusipsiLPGi-0.5
HypothalamusipsiHYPO1
Lateral hypothalamic areaipsiLH-0.5
Posterior hypothalamic areaipsiPHA-0.5
ThalamusipsiT3
Centrolateral thalamic nucleusipsiCL1
Ventrobasal complexipsiVB3
Ventral posterolateral thalamic nucleusipsiVPL-0.5
Ventral posteromedial thalamic nucleusipsiVPM-0.5
Posterior groupipsiPTG1
Central amygdaloid nucleus anterior partipsiCeAn-0.5
Ventral funiculusipsivf-2
Cervical segment 1ipsiCS12
Ventral horn C1ipsiVHC11
Cervical segment 2ipsiCS22
Ventral horn C2ipsiVHC21
Cervical segment 3ipsiCS32
Ventral horn C3ipsiVHC31
Cervical segment 4ipsiCS42
Cervical segment 5ipsiCS52
Cervical segment 6ipsiCS62
Area X C6ipsiSCL10C6-0.5
Spinal cord layer 7 C6ipsiSCL7C63
Spinal cord layer 8 C6ipsiSCL8C63
Cervical segment 7ipsiCS72
Area X C7ipsiSCL10C7-0.5
Spinal cord layer 7 C7ipsiSCL7C73
Spinal cord layer 8 C7ipsiSCL8C73
Spinal cord layer 9 C7ipsiSCL9C7-0.5
Cervical segment 8ipsiCS82
Thoracal segment 1ipsiT12
Thoracal segment 2ipsiT22
Thoracal segment 3ipsiT32
Thoracal segment 4ipsiT42
Thoracal segment 5ipsiT52
Thoracal segment 6ipsiT62
Thoracal segment 7ipsiT72
Thoracal segment 8ipsiT82
Thoracal segment 9ipsiT92
Area X T9ipsiSCL10T9-0.5
Spinal cord layer 7 T9ipsiSCL7T93
Spinal cord layer 8 T9ipsiSCL8T93
Thoracal segment 10ipsiT102
Thoracal segment 11ipsiT112
Thoracal segment 12ipsiT122
Thoracal segment 13ipsiT132
Lumbar segment 1ipsiL12
Medial motoneuron groups of layer 9 L1ipsiMGL9L1m1
Lateral motoneuron groups of layer 9 L1ipsiMGL9L1L1
Lumbar segment 2ipsiL22
Lumbar segment 3ipsiL32
Interneuron groups of layer 9 L3ipsiiGL9L3-0.5
Motoneuron groups of layer 9 L3ipsiMGL9L3-0.5
Lateral motoneuron groups of layer 9 L3ipsiMGL9L3L1
Spinal cord border between layer 10 and layer 7 L3ipsiSCLb10L7L3-0.5
Lumbar segment 4ipsiL42
Area X L4ipsiSCL10L41
Spinal cord layer 8 L4ipsiSCL8L41
Interneuron groups of layer 9 L4ipsiiGL9L4-0.5
Motoneuron groups of layer 9 L4ipsiMGL9L4-0.5
Spinal cord border between layer 10 and layer 7 L4ipsiSCLb10L7L4-0.5
Lumbar segment 5ipsiL52
Interneuron groups of layer 9 L5ipsiiGL9L5-0.5
Motoneuron groups of layer 9 L5ipsiMGL9L5-0.5
Spinal nucleus of the bulbocavernosus lumbal segment 5ipsiBCL53
Lumbar segment 6ipsiL62
Interneuron groups of layer 9 L6ipsiiGL9L6-0.5
Motoneuron groups of layer 9 L6ipsiMGL9L6-0.5
Spinal nucleus of the bulbocavernosus lumbal segment 6ipsiBCL63
Sacral segment 1ipsiSa13
Interneuron groups of layer 9 S1ipsiiGL9S1-0.5
Motoneuron groups of layer 9 S1ipsiMGL9S1-0.5
Sacral segment 2ipsiSa23
Sacral segment 3ipsiSa33
Sacral segment 4ipsiSa43
Coccygeal segment 1ipsiCo13
Coccygeal segment 2ipsiCo23
StomachipsiOrgsStomS-1
Bulbospongiosus musclecontraMuscbsp1
Ventral bulbospongiosus musclecontraMuscbspV-10
Dorsal bulbospongiosus musclecontraMuscbspD-10
Ischiocavernosus musclecontraMuscicav-10
Quadriceps femoris muscleipsiMuscQuadF-0.5
Bulbospongiosus muscleipsiMuscbsp1
Ventral bulbospongiosus muscleipsiMuscbspV-10
Dorsal bulbospongiosus muscleipsiMuscbspD-10
Ischiocavernosus muscleipsiMuscicav-10
Triceps surae muscleipsiMuscTriSu-0.5
CervixipsiOrgUTC-10

Input from

NameSideAbbr.WeightDetails
Intermediate gray layer of the superior colliculuscontraInG-0.5
Locus coeruleuscontraLC1
Caudal part of ventral locus coeruleuscontraLCveca0.5
Medial reticular formationcontraRFm-0.5
Mesencephalic reticular formationcontraMRF-0.5
Pontine reticular nucleus oral partcontraPnO0.5
Pontine reticular nucleus caudal partcontraPNC0.5
Gigantocellular reticular nucleuscontraGi1
Gigantocellular reticular nucleus alpha partcontraGiA3
Gigantocellular reticular nucleus medial partcontraGiM-0.5
Gigantocellular reticular nucleus ventral partcontraGiV3
Lateral paragigantocellular nucleuscontraLPGi-0.5
Somatomotoric regions layer 5contraSMRL53
Dorsal root ganglion L5contraDRGL52
Central grayipsiCG1
A5 noradrenaline cellsipsiA52
Locus coeruleusipsiLC3
Caudal part of ventral locus coeruleusipsiLCveca3
Medial reticular formationipsiRFm-0.5
Ventrolateral reticular formationipsiVLRF-0.5
Mesencephalic reticular formationipsiMRF-0.5
Pontine reticular nucleusipsiPRN3
Dorsolateral pontine reticular formationipsiPRNDL1
Pontine reticular nucleus oral partipsiPnO1
Pontine reticular nucleus caudal partipsiPNC1
Koelliker Fuse nucleusipsiKF2
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe1
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus medial partipsiGiM-0.5
Gigantocellular reticular nucleus rostral partipsiGiRo-0.5
Subcoeruleus nucleusipsiSubC3
Lateral vestibular nucleusipsiLVe3
Raphe magnus nucleusipsiRMg1
Raphe obscurus nucleusipsiROb-0.5
Lateral paragigantocellular nucleusipsiLPGi1
Rostral part of the ventromedial medulla oblongataipsiRMeObvm1
Lateral hypothalamic areaipsiLH1
Paraventricular hypothalamic nucleusipsiPa0.5
Zona incerta rostromedial partipsiZIrm0
Lateral agranular prefrontal cortexipsiAGl1
Medial agranular prefrontal cortexipsiAGm1
Primary somatosensory cortexipsiS11
Secondary somatosensory cortexipsiS21
Somatomotoric regions layer 5ipsiSMRL53
Area X C4ipsiSCL10C4-0.5
Spinal cord layer 5 C4ipsiSCL5C4-0.5
Spinal cord layer 4 C4ipsiSCL4C4-0.5
Spinal cord layer 7 C4ipsiSCL7C4-0.5
Spinal cord layer 8 C4ipsiSCL8C4-0.5
Area X C5ipsiSCL10C5-0.5
Spinal cord layer 5 C5ipsiSCL5C5-0.5
Spinal cord layer 4 C5ipsiSCL4C5-0.5
Spinal cord layer 7 C5ipsiSCL7C5-0.5
Spinal cord layer 8 C5ipsiSCL8C5-0.5
Area X C6ipsiSCL10C6-0.5
Spinal cord layer 5 C6ipsiSCL5C6-0.5
Spinal cord layer 4 C6ipsiSCL4C6-0.5
Spinal cord layer 7 C6ipsiSCL7C6-0.5
Spinal cord layer 8 C6ipsiSCL8C6-0.5
Area X T13ipsiSCL10T13-0.5
Spinal cord layer 5 T13ipsiSCL5T13-0.5
Spinal cord layer 6 T13ipsiSCL6T13-0.5
Spinal cord layer 3 T13ipsiSCL3T13-0.5
Spinal cord layer 4 T13ipsiSCL4T13-0.5
Spinal cord layer 1 T13ipsiSCL1T13-0.5
Spinal cord layer 2 T13ipsiSCL2T13-0.5
Spinal cord layer 7 T13ipsiSCL7T13-0.5
Spinal cord layer 8 T13ipsiSCL8T13-0.5
Dorsal root ganglion L1ipsiDRGL10
Dorsal root ganglion L2ipsiDRGL20
Dorsal root ganglion L3ipsiDRGL30
Dorsal root ganglion L4ipsiDRGL41
Dorsal root ganglion L5ipsiDRGL52
Dorsal root ganglion L6ipsiDRGL61
Sciatic nerveipsisci-0.5
Gastrocnemius nerveipsigastrocn0

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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