University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Intermediomedial cell column C1 right


Abbreviation
IMMC1
Color       
Superior regionsCervical segment 1

SynonymsAbbr.Language
Intermediomedial cell column C1IMMC1Eng

Output to

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal graycontraVLPAG-0.5
Lateral hypothalamic areacontraLH1
Medial division of the hypothalamuscontraMdH1
ThalamuscontraT3
Submedius thalamic nucleuscontraSub3
Ventrobasal complex anterior partcontraVBa1
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Prerubral fieldipsiPR-3
Lateral reticular nucleusipsiLRt-0.5
Nucleus of the solitary tractipsiSol-0.5
Lateral hypothalamic areaipsiLH1
Medial division of the hypothalamusipsiMdH1
ThalamusipsiT3
Anteromedial thalamic nucleusipsiAM-3
Paracentral thalamic nucleusipsiPC-3
Rhomboid thalamic nucleusipsiRh-3
Submedius thalamic nucleusipsiSub1.5
Reuniens thalamic nucleusipsiRe-3
Reuniens thalamic nucleus ventral partipsiReV-3
Ventrolateral thalamic nucleusipsiVL-3
Ventrobasal complexipsiVB-3
Ventrobasal complex anterior partipsiVBa0.5
Ventromedial thalamic nucleusipsiVM-3
Posterior groupipsiPTG-3
Ventral medial nucleus of the thalamusipsiVMT-3
Zona incertaipsiZI-0.5
Corpus cavernosumipsiOrgCC1
Trachea sideipsiOrgsTras1

Input from

NameSideAbbr.WeightDetails
A5 noradrenaline cellscontraA52
A7 noradrenaline cellscontraA72
Locus coeruleuscontraLC2
Subcoeruleus nucleuscontraSubC2
Mesencephalic trigeminal nucleuscontraMe50.5
Nucleus interfascicularis hypoglossicontraNIFH-0.5
Rostral ventral respiratory groupcontraRVRG-0.5
Lateral hypothalamic areacontraLH0.5
Cingulate cortex area 3 vasoregulatory region layer 3contraCg3vrL31
Cingulate cortex area 3 vasoregulatory region layer 4contraCg3vrL41
Cingulate cortex area 3 vasoregulatory region layer 5contraCg3vrL51
Cingulate cortex area 3 vasoregulatory region layer 6contraCg3vrL61
Parietal association cortex layer 5contraParPLa52
Insular cortex layer 5contraICXL52
Perirhinal cortex layer 5contraA35L51
Lateral agranular prefrontal cortex layer 5contraAGlL53
Dorsal root ganglion C2contraDRGC2-0.5
Dorsal root ganglion C3contraDRGC3-0.5
Dorsal root ganglion C4contraDRGC4-0.5
MesencephalonipsiMEC-0.5
Nucleus of DarkschewitschipsiDk-0.5
Red nucleusipsiR-0.5
Cerebellar nucleiipsiDCeN-0.5
A5 noradrenaline cellsipsiA53
A7 noradrenaline cellsipsiA73
Locus coeruleusipsiLC3
Paramedian reticular nucleusipsiPMn0
Medullary reticular nucleusipsiMdD-0.5
Subcoeruleus nucleusipsiSubC3
MyelencephalonipsiMYC-0.5
Mesencephalic trigeminal nucleusipsiMe51
Spinal vestibular nucleusipsiSpVe-0.5
Superior vestibular nucleusipsiSuVe-0.5
Lateral vestibular nucleusipsiLVe-0.5
Raphe nucleiipsiRAN-0.5
Raphe obscurus nucleus ventral partipsiRObV2
Raphe pallidus nucleusipsiRPa2
Ventral respiratory group rostral partipsiVReGr-0.5
Nucleus interfascicularis hypoglossiipsiNIFH-0.5
HypothalamusipsiHYPO-0.5
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area posterior partipsiLHAp1
Tuberal division of the lateral hypothalamic areaipsiLHTC-0.5
Paraventricular hypothalamic nucleusipsiPa-0.5
Perifornical nucleusipsiPeF1
Parafascicular thalamic nucleusipsiPF-0.5
Lateral group of the dorsal thalamusipsiLAT-0.5
Posterior thalamic nuclear groupipsiPo-0.5
Midline group of the dorsal thalamusipsiMTN-0.5
Paratenial thalamic nucleusipsiPT-0.5
Amygdaloid complexipsiAC-0.5
Cingulate cortex area 3 vasoregulatory region layer 3ipsiCg3vrL31
Cingulate cortex area 3 vasoregulatory region layer 4ipsiCg3vrL41
Cingulate cortex area 3 vasoregulatory region layer 5ipsiCg3vrL51
Cingulate cortex area 3 vasoregulatory region layer 6ipsiCg3vrL61
Nucleus of the posterior commissureipsiPCom-0.5
Dorsal root ganglion C2ipsiDRGC22
Dorsal root ganglion C3ipsiDRGC32
Dorsal root ganglion C4ipsiDRGC42
Dorsal root ganglion L2ipsiDRGL22

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications