University of Rostock

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Rat connectome



Lateral spinal nucleus C1 right


Abbreviation
LSpC1
Color       
Superior regionsCervical segment 1

SynonymsAbbr.Language
Lateral spinal nucleus C1LSpC1Eng
Nucleus cervicalis lateralis Lat
Nucleus in the dorsolateral funiculus  
Lateral cervical nucleus  
Lateral spinal nucleusLSP 
Lateral spinal nucleusLSN 

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschcontraDk-0.5
Oculomotor nucleuscontra3-0.5
Periaqueductal graycontraPAG-0.5
Ventrolateral periaqueductal graycontraVLPAG2
Red nucleuscontraR-0.5
Inferior colliculuscontraICOL3
Intercollicular nucleuscontraInCo-0.5
Superior colliculuscontraSC3
Edinger Westphal nucleuscontraEW-0.5
Interstitial nucleus of CajalcontraInC-0.5
Mesencephalic reticular formationcontraMRF3
Cuneiforme nucleuscontraCnF2
Parabrachial nucleuscontraPB3
Koelliker Fuse nucleuscontraKF-0.5
Gigantocellular reticular nucleus lateral partcontraGirL1
Lateral reticular nucleus lateral partcontraLRtL2
Principal sensory trigeminal nucleus dorsolateral partcontraPr5DL-0.5
Nucleus of the solitary tractcontraSol-0.5
Nucleus of the solitary tract lateral partcontraSolL1
Nucleus of the solitary tract medial partcontraSolM1
Cuneate nucleuscontraCu-0.5
Nucleus of the vertical limb of the diagonal bandcontraVDB-0.5
Medial septal nucleuscontraMS-0.5
Preoptic anterior regioncontraPAreg3
Lateral hypothalamic areacontraLH3
Medial division of the hypothalamuscontraMdH2
Dorsal hypothalamic areacontraDA3
Dorsomedial hypothalamic nucleus [Medial zone]contraDM3
Paraventricular hypothalamic nucleuscontraPa3
Suprachiasmatic nucleuscontraSCh3
Supraoptic nucleus [Supraoptic region]contraSO3
Dorsal thalamuscontraDOR2
Centrolateral thalamic nucleuscontraCL2
Posterior thalamic nuclear groupcontraPo2
Posterior thalamic nuclear group ventromedial partcontraPovm-0.5
Submedius thalamic nucleuscontraSub0.5
Ventrobasal complexcontraVB3
Ventral posterolateral thalamic nucleuscontraVPL-0.5
Pretectal regioncontraPRT-0.5
Anterior pretectal nucleuscontraAPT-0.5
Posterior pretectal nucleuscontraPPT-0.5
Lateral funiculuscontralf-2
Amygdaloid complexcontraAC-0.5
Central amygdaloid nucleuscontraCe1
Globus palliduscontraGP-0.5
Ventral pallidumcontraVP-0.5
Accumbens nucleuscontraAc-0.5
Infralimbic cortexcontraIL-0.5
Orbital cortexcontraOrC0.5
Medial orbital cortexcontraMO-0.5
Septal regioncontraSER-0.5
Lateral septal nucleuscontraLS-0.5
Cervical segment 1contraCS1-0.5
Cervical segment 2contraCS2-0.5
Cervical segment 3contraCS3-0.5
Cervical segment 4contraCS4-0.5
Cervical segment 5contraCS5-0.5
Cervical segment 6contraCS6-0.5
Cervical segment 7contraCS7-0.5
Cervical segment 8contraCS8-0.5
Thoracal segment 1contraT1-0.5
Thoracal segment 2contraT2-0.5
Thoracal segment 3contraT3-0.5
Thoracal segment 4contraT4-0.5
Thoracal segment 5contraT5-0.5
Thoracal segment 6contraT6-0.5
Thoracal segment 7contraT7-0.5
Thoracal segment 8contraT8-0.5
Thoracal segment 9contraT9-0.5
Thoracal segment 10contraT10-0.5
Thoracal segment 11contraT11-0.5
Thoracal segment 12contraT12-0.5
Thoracal segment 13contraT13-0.5
Lumbar segment 1contraL1-0.5
Lumbar segment 2contraL2-0.5
Lumbar segment 3contraL3-0.5
Lumbar segment 4contraL4-0.5
Area X L4contraSCL10L4-0.5
Spinal cord layer 8 L4contraSCL8L4-0.5
Lumbar segment 5contraL5-0.5
Dorsal horn L5contraDHL51
Lumbar segment 6contraL6-0.5
Dorsal horn L6contraDHL61
Sacral segment 1contraSa1-0.5
Dorsal horn S1contraDHS11
Sacral segment 2contraSa2-0.5
Sacral segment 3contraSa3-0.5
Sacral segment 4contraSa4-0.5
Central grayipsiCG1
Periaqueductal grayipsiPAG2
Ventrolateral periaqueductal grayipsiVLPAG1.5
Prerubral fieldipsiPR-3
Inferior colliculusipsiICOL2
Superior colliculusipsiSC2
Mesencephalic reticular formationipsiMRF1
Cuneiforme nucleusipsiCnF1.5
Parabrachial nucleusipsiPB1.5
Koelliker Fuse nucleusipsiKF-0.5
Lateral parabrachial nucleus external partipsiLPBE1.5
Lateral reticular nucleusipsiLRt-0.5
Lateral reticular nucleus lateral partipsiLRtL1
Lateral reticular nucleus magnocellular partipsiLRtMC1
Lateral reticular nucleus parvicellular partipsiLRtPC1
Principal sensory trigeminal nucleus dorsolateral partipsiPr5DL-0.5
Nucleus of the solitary tractipsiSol1
Nucleus of the solitary tract caudal partipsiSolca-0.5
Nucleus of the solitary tract lateral partipsiSolL1
Nucleus of the solitary tract medial partipsiSolM1
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial septal nucleusipsiMS-0.5
HypothalamusipsiHYPO-0.5
Dorsal regionipsiDHR-0.5
Preoptic anterior regionipsiPAreg3
Lateral hypothalamic areaipsiLH3
Medial division of the hypothalamusipsiMdH3
Dorsal hypothalamic areaipsiDA1.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1.5
Posterior hypothalamic areaipsiPHA-0.5
Paraventricular hypothalamic nucleusipsiPa1.5
Suprachiasmatic nucleusipsiSCh1.5
Supraoptic nucleus [Supraoptic region]ipsiSO1.5
Subincertal nucleusipsiSubI-1
Dorsal thalamusipsiDOR1
Anteromedial thalamic nucleusipsiAM-3
Centrolateral thalamic nucleusipsiCL1
Paracentral thalamic nucleusipsiPC-3
Rhomboid thalamic nucleusipsiRh-3
Posterior thalamic nuclear groupipsiPo1
Posterior thalamic nuclear group caudal partipsiPoca2
Submedius thalamic nucleusipsiSub2
Reuniens thalamic nucleusipsiRe-3
Reuniens thalamic nucleus ventral partipsiReV-3
Ventrolateral thalamic nucleusipsiVL-3
Ventrobasal complexipsiVB2
Ventral posterolateral thalamic nucleus caudal partipsiVPLca2
Ventral posteromedial thalamic nucleusipsiVPM2
Ventromedial thalamic nucleusipsiVM-3
Posterior groupipsiPTG-3
Ventral medial nucleus of the thalamusipsiVMT-3
Zona incertaipsiZI-0.5
Amygdaloid complexipsiAC-0.5
Bed nucleus of the stria terminalisipsiBST1
Central amygdaloid nucleusipsiCe1
Central amygdaloid nucleus anterior partipsiCeAn3
Globus pallidusipsiGP-0.5
Ventral pallidumipsiVP-0.5
Accumbens nucleusipsiAc-0.5
Infralimbic cortexipsiIL-0.5
Orbital cortexipsiOrC0.5
Medial orbital cortexipsiMO-0.5
Septal regionipsiSER-0.5
Lateral septal nucleusipsiLS-0.5
Ventrolateral funiculusipsivLF-2
Cervical segment 1ipsiCS1-0.5
Cervical segment 2ipsiCS2-0.5
Cervical segment 3ipsiCS3-0.5
Cervical segment 4ipsiCS4-0.5
Cervical segment 5ipsiCS5-0.5
Cervical segment 6ipsiCS6-0.5
Cervical segment 7ipsiCS7-0.5
Cervical segment 8ipsiCS8-0.5
Thoracal segment 1ipsiT1-0.5
Thoracal segment 2ipsiT2-0.5
Thoracal segment 3ipsiT3-0.5
Thoracal segment 4ipsiT4-0.5
Thoracal segment 5ipsiT5-0.5
Thoracal segment 6ipsiT6-0.5
Thoracal segment 7ipsiT7-0.5
Thoracal segment 8ipsiT8-0.5
Thoracal segment 9ipsiT9-0.5
Thoracal segment 10ipsiT10-0.5
Thoracal segment 11ipsiT11-0.5
Thoracal segment 12ipsiT12-0.5
Thoracal segment 13ipsiT13-0.5
Lumbar segment 1ipsiL1-0.5
Lumbar segment 2ipsiL2-0.5
Lumbar segment 3ipsiL3-0.5
Lumbar segment 4ipsiL4-0.5
Area X L4ipsiSCL10L4-0.5
Spinal cord layer 8 L4ipsiSCL8L4-0.5
Lumbar segment 5ipsiL5-0.5
Dorsal horn L5ipsiDHL51
Lumbar segment 6ipsiL6-0.5
Dorsal horn L6ipsiDHL61
Sacral segment 1ipsiSa1-0.5
Dorsal horn S1ipsiDHS11
Sacral segment 2ipsiSa2-0.5
Sacral segment 3ipsiSa3-0.5
Sacral segment 4ipsiSa4-0.5
Stellate ganglionipsiAutoSteG-0.5
Superior cervical ganglionipsiAutoSCeG-0.5
Suprarenal ganglionipsiAutoSupra-0.5
Celiac ganglionipsiAutoCel-0.5
Pancreas sideipsiOrgsPancs-0.5

Input from

NameSideAbbr.WeightDetails
Lateral hypothalamic areaipsiLH1
Spinal cord lamina 5ipsiMESL5-0.5
Spinal cord lamina 3ipsiMESL3-0.5
Spinal cord lamina 4ipsiMESL4-0.5
Spinal cord lamina 1ipsiMESL1-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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