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Rat connectome



Posterior pretectal nucleus left


Abbreviation
PPT
Color       
Superior regionsPretectal region

SynonymsAbbr.Language
Posterior pretectal area Eng
Posterior pretectal nucleusPPTEng

SubregionsSide
Posterior pretectal nucleus caudal partleft
Posterior pretectal nucleus caudolateral partleft
Posterior pretectal nucleus dorsal partleft
Posterior pretectal nucleus medial partleft
Posterior pretectal nucleus rostral partleft
Posterior pretectal nucleus dorsolateral partleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG2
Central nucleus of the inferior colliculusipsiCIC1
Superior colliculusipsiSC-0.5
Superior colliculus superficial layersipsiSCs-0.5
Medial area of ponsipsiMeP-0.5
Pontine grayipsiPG3
Reticulotegmental nucleusipsiRETn-1
Prepositus nucleusipsiPr2
Medial vestibular nucleusipsiMVe2
Inferior oliveipsiIO2
Olivary pretectal nucleusipsiOPT-1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0.5
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Suprachiasmatic nucleusipsiSCh3
Suprachiasmatic nucleus ventrolateral partipsiSCnVL1
Anterior group of the dorsal thalamusipsiATN3
Dorsal part of the lateral geniculate complexipsiLGd1
Ventral part of the lateral geniculate complexipsiLGv2
Parafascicular thalamic nucleusipsiPF-0.5
Posterior thalamic nuclear groupipsiPo1
Reuniens thalamic nucleus caudomedial divisionipsiRecm2
Reunienes thalamic nucleus rostromedial divisionipsiRerm2
Reuniens thalamic nucleus rostrolateral divisionipsiRerl2
Parafascicular nucleusipsiPFa2
Lateral posterior thalamic nucleusipsiLP2
Laterodorsal thalamic nucleusipsiLD3
Zona incertaipsiZI-1
Nucleus of the fields of ForelipsiF-1
Anterior pretectal nucleusipsiAPT2
RetinaipsiRET1
Medial terminal nucleus of the accessory optic tractipsiMT-1
Subthalamic nucleusipsiSTh1
Ventral lateral geniculate nucleusipsiVLG2
Cervical segment 7ipsiCS7-1
Superior colliculuscontraSC-0.5
Prepositus nucleuscontraPr2
Laterodorsal thalamic nucleuscontraLD1
Anterior pretectal nucleuscontraAPT2
RetinacontraRET2
Cervical segment 7contraCS7-1

Input from

NameSideAbbr.WeightDetails
Dorsal terminal nucleus of the accessory optic tractipsiDT3
Superior colliculusipsiSC-0.5
Superior colliculus superficial layersipsiSCs-0.5
Dorsolateral humpipsiCERcndl0
Anterior interposed nucleusipsiAIN0
Posterior interposed nucleusipsiCERpin0
Lateral cerebellar nucleusipsiCERL1
Medial cerebellar nucleusipsiMed0
Median raphe nucleusipsiMnR0
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Lateral hypothalamic area perifornical partipsiPFx1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Posterior hypothalamic nucleus caudal partipsiPHCa1.5
Posterior hypothalamic nucleus rostral partipsiPHRo1
Posterior groupipsiPTG-0.5
Zona incertaipsiZI3
Optic nerveipsi2n-0.5
Anterior pretectal nucleusipsiAPT2
RetinaipsiRET3
Accessory optic systemipsiAOS-3
Lateral terminal nucleus of the accessory optic tractipsiLTeN3
Medial terminal nucleus of the accessory optic tractipsiMT-3
Caudal globus pallidusipsiGPc1
Primary visual cortexipsiV1-0.5
Primary visual cortex layer 5ipsiV1L51
Secondary visual cortex lateral areaipsiV2L-0.5
Medial extrastriate cortexipsiVISM-0.5
Spinal cordipsiMES-0.5
Spinal cord layer 1 C1ipsiSCL1C1-0.5
Spinal cord layer 1 C2ipsiSCL1C2-0.5
Spinal cord layer 1 C3ipsiSCL1C3-0.5
Spinal cord layer 1 C4ipsiSCL1C4-0.5
Spinal cord layer 1 C5ipsiSCL1C5-0.5
Spinal cord layer 1 C6ipsiSCL1C6-0.5
Spinal cord layer 1 C7ipsiSCL1C7-0.5
Spinal cord layer 1 C8ipsiSCL1C8-0.5
Spinal cord layer 1 T1ipsiSCL1T1-0.5
Spinal cord layer 1 T2ipsiSCL1T2-0.5
Spinal cord layer 1 T3ipsiSCL1T3-0.5
Spinal cord layer 1 T4ipsiSCL1T4-0.5
Spinal cord layer 1 T5ipsiSCL1T5-0.5
Spinal cord layer 1 T6ipsiSCL1T6-0.5
Spinal cord layer 1 T7ipsiSCL1T7-0.5
Spinal cord layer 1 T8ipsiSCL1T8-0.5
Spinal cord layer 1 T9ipsiSCL1T9-0.5
Spinal cord layer 1 T10ipsiSCL1T10-0.5
Spinal cord layer 1 T11ipsiSCL1T11-0.5
Spinal cord layer 1 T12ipsiSCL1T12-0.5
Spinal cord layer 1 T13ipsiSCL1T13-0.5
Spinal cord layer 1 L1ipsiSCL1L1-0.5
Spinal cord layer 1 L2ipsiSCL1L2-0.5
Spinal cord layer 1 L3ipsiSCL1L3-0.5
Spinal cord layer 1 L4ipsiSCL1L4-0.5
Spinal cord layer 1 L5ipsiSCL1L5-0.5
Spinal cord layer 1 L6ipsiSCL1L6-0.5
Spinal cord layer 1 S1ipsiSCL1S1-0.5
Spinal cord layer 1 S2ipsiSCL1S2-0.5
Spinal cord layer 1 S3ipsiSCL1S3-0.5
Spinal cord layer 1 S4ipsiSCL1S4-0.5
Superior colliculuscontraSC-0.5
Dorsolateral humpcontraCERcndl0
Anterior interposed nucleuscontraAIN1
Posterior interposed nucleuscontraCERpin0
Lateral cerebellar nucleuscontraCERL3
Medial cerebellar nucleuscontraMed0
Posterior hypothalamic nucleus caudal partcontraPHCa0.5
Posterior hypothalamic nucleus rostral partcontraPHRo0.5
RetinacontraRET3
Primary visual cortexcontraV1-0.5
Secondary visual cortex medial areacontraV2M-0.5
Lateral spinal nucleus C1contraLSpC1-0.5
Area X C1contraSCL10C1-0.5
Spinal cord layer 5 C1contraSCL5C1-0.5
Spinal cord layer 6 C1contraSCL6C1-0.5
Spinal cord layer 4 C1contraSCL4C1-0.5
Spinal cord layer 1 C1contraSCL1C1-0.5
Lateral spinal nucleus C2contraLSpC2-0.5
Area X C2contraSCL10C2-0.5
Spinal cord layer 5 C2contraSCL5C2-0.5
Spinal cord layer 6 C2contraSCL6C2-0.5
Spinal cord layer 4 C2contraSCL4C2-0.5
Spinal cord layer 1 C2contraSCL1C2-0.5
Lateral spinal nucleus C3contraLSpC3-0.5
Area X C3contraSCL10C3-0.5
Spinal cord layer 5 C3contraSCL5C3-0.5
Spinal cord layer 6 C3contraSCL6C3-0.5
Spinal cord layer 4 C3contraSCL4C3-0.5
Spinal cord layer 1 C3contraSCL1C3-0.5
Lateral spinal nucleus C4contraLSpC4-0.5
Area X C4contraSCL10C4-0.5
Spinal cord layer 5 C4contraSCL5C4-0.5
Spinal cord layer 6 C4contraSCL6C4-0.5
Spinal cord layer 4 C4contraSCL4C4-0.5
Spinal cord layer 1 C4contraSCL1C4-0.5
Lateral spinal nucleus C5contraLSpC5-0.5
Area X C5contraSCL10C5-0.5
Spinal cord layer 5 C5contraSCL5C5-0.5
Spinal cord layer 6 C5contraSCL6C5-0.5
Spinal cord layer 4 C5contraSCL4C5-0.5
Spinal cord layer 1 C5contraSCL1C5-0.5
Lateral spinal nucleus C6contraLSpC6-0.5
Area X C6contraSCL10C6-0.5
Spinal cord layer 5 C6contraSCL5C6-0.5
Spinal cord layer 6 C6contraSCL6C6-0.5
Spinal cord layer 4 C6contraSCL4C6-0.5
Spinal cord layer 1 C6contraSCL1C6-0.5
Lateral spinal nucleus C7contraLSpC7-0.5
Area X C7contraSCL10C7-0.5
Spinal cord layer 5 C7contraSCL5C7-0.5
Spinal cord layer 6 C7contraSCL6C7-0.5
Spinal cord layer 4 C7contraSCL4C7-0.5
Spinal cord layer 1 C7contraSCL1C7-0.5
Lateral spinal nucleus C8contraLSpC8-0.5
Area X C8contraSCL10C8-0.5
Spinal cord layer 5 C8contraSCL5C8-0.5
Spinal cord layer 6 C8contraSCL6C8-0.5
Spinal cord layer 4 C8contraSCL4C8-0.5
Spinal cord layer 1 C8contraSCL1C8-0.5
Lateral spinal nucleus T1contraLSpT1-0.5
Area X T1contraSCL10T1-0.5
Spinal cord layer 5 T1contraSCL5T1-0.5
Spinal cord layer 6 T1contraSCL6T1-0.5
Spinal cord layer 4 T1contraSCL4T1-0.5
Spinal cord layer 1 T1contraSCL1T1-0.5
Lateral spinal nucleus T2contraLSpT2-0.5
Area X T2contraSCL10T2-0.5
Spinal cord layer 5 T2contraSCL5T2-0.5
Spinal cord layer 6 T2contraSCL6T2-0.5
Spinal cord layer 4 T2contraSCL4T2-0.5
Spinal cord layer 1 T2contraSCL1T2-0.5
Lateral spinal nucleus T3contraLSpT3-0.5
Area X T3contraSCL10T3-0.5
Spinal cord layer 5 T3contraSCL5T3-0.5
Spinal cord layer 6 T3contraSCL6T3-0.5
Spinal cord layer 4 T3contraSCL4T3-0.5
Spinal cord layer 1 T3contraSCL1T3-0.5
Lateral spinal nucleus T4contraLSpT4-0.5
Area X T4contraSCL10T4-0.5
Spinal cord layer 5 T4contraSCL5T4-0.5
Spinal cord layer 6 T4contraSCL6T4-0.5
Spinal cord layer 4 T4contraSCL4T4-0.5
Spinal cord layer 1 T4contraSCL1T4-0.5
Lateral spinal nucleus T5contraLSpT5-0.5
Area X T5contraSCL10T5-0.5
Spinal cord layer 5 T5contraSCL5T5-0.5
Spinal cord layer 6 T5contraSCL6T5-0.5
Spinal cord layer 4 T5contraSCL4T5-0.5
Spinal cord layer 1 T5contraSCL1T5-0.5
Lateral spinal nucleus T6contraLSpT6-0.5
Area X T6contraSCL10T6-0.5
Spinal cord layer 5 T6contraSCL5T6-0.5
Spinal cord layer 6 T6contraSCL6T6-0.5
Spinal cord layer 4 T6contraSCL4T6-0.5
Spinal cord layer 1 T6contraSCL1T6-0.5
Lateral spinal nucleus T7contraLSpT7-0.5
Area X T7contraSCL10T7-0.5
Spinal cord layer 5 T7contraSCL5T7-0.5
Spinal cord layer 6 T7contraSCL6T7-0.5
Spinal cord layer 1 T7contraSCL1T7-0.5
Spinal cord layer 4 T7contraSCL4T7-0.5
Lateral spinal nucleus T8contraLSpT8-0.5
Area X T8contraSCL10T8-0.5
Spinal cord layer 5 T8contraSCL5T8-0.5
Spinal cord layer 6 T8contraSCL6T8-0.5
Spinal cord layer 4 T8contraSCL4T8-0.5
Spinal cord layer 1 T8contraSCL1T8-0.5
Lateral spinal nucleus T9contraLSpT9-0.5
Area X T9contraSCL10T9-0.5
Spinal cord layer 5 T9contraSCL5T9-0.5
Spinal cord layer 6 T9contraSCL6T9-0.5
Spinal cord layer 4 T9contraSCL4T9-0.5
Spinal cord layer 1 T9contraSCL1T9-0.5
Lateral spinal nucleus T10contraLSpT10-0.5
Area X T10contraSCL10T10-0.5
Spinal cord layer 5 T10contraSCL5T10-0.5
Spinal cord layer 6 T10contraSCL6T10-0.5
Spinal cord layer 4 T10contraSCL4T10-0.5
Spinal cord layer 1 T10contraSCL1T10-0.5
Lateral spinal nucleus T11contraLSpT11-0.5
Area X T11contraSCL10T11-0.5
Spinal cord layer 5 T11contraSCL5T11-0.5
Spinal cord layer 6 T11contraSCL6T11-0.5
Spinal cord layer 4 T11contraSCL4T11-0.5
Spinal cord layer 1 T11contraSCL1T11-0.5
Lateral spinal nucleus T12contraLSpT12-0.5
Area X T12contraSCL10T12-0.5
Spinal cord layer 5 T12contraSCL5T12-0.5
Spinal cord layer 6 T12contraSCL6T12-0.5
Spinal cord layer 4 T12contraSCL4T12-0.5
Spinal cord layer 1 T12contraSCL1T12-0.5
Lateral spinal nucleus T13contraLSpT13-0.5
Area X T13contraSCL10T13-0.5
Spinal cord layer 5 T13contraSCL5T13-0.5
Spinal cord layer 6 T13contraSCL6T13-0.5
Spinal cord layer 4 T13contraSCL4T13-0.5
Spinal cord layer 1 T13contraSCL1T13-0.5
Lateral spinal nucleus L1contraLSpL1-0.5
Area X L1contraSCL10L1-0.5
Spinal cord layer 5 L1contraSCL5L1-0.5
Spinal cord layer 6 L1contraSCL6L1-0.5
Spinal cord layer 4 L1contraSCL4L1-0.5
Spinal cord layer 1 L1contraSCL1L1-0.5
Lateral spinal nucleus L2contraLSpL2-0.5
Area X L2contraSCL10L2-0.5
Spinal cord layer 5 L2contraSCL5L2-0.5
Spinal cord layer 6 L2contraSCL6L2-0.5
Spinal cord layer 4 L2contraSCL4L2-0.5
Spinal cord layer 1 L2contraSCL1L2-0.5
Lateral spinal nucleus L3contraLSpL3-0.5
Area X L3contraSCL10L3-0.5
Spinal cord layer 5 L3contraSCL5L3-0.5
Spinal cord layer 6 L3contraSCL6L3-0.5
Spinal cord layer 4 L3contraSCL4L3-0.5
Spinal cord layer 1 L3contraSCL1L3-0.5
Lateral spinal nucleus L4contraLSpL4-0.5
Area X L4contraSCL10L4-0.5
Spinal cord layer 5 L4contraSCL5L4-0.5
Spinal cord layer 6 L4contraSCL6L4-0.5
Spinal cord layer 4 L4contraSCL4L4-0.5
Spinal cord layer 1 L4contraSCL1L4-0.5
Lateral spinal nucleus L5contraLSpL5-0.5
Area X L5contraSCL10L5-0.5
Spinal cord layer 5 L5contraSCL5L5-0.5
Spinal cord layer 6 L5contraSCL6L5-0.5
Spinal cord layer 4 L5contraSCL4L5-0.5
Spinal cord layer 1 L5contraSCL1L5-0.5
Lateral spinal nucleus L6contraLSpL6-0.5
Area X L6contraSCL10L6-0.5
Spinal cord layer 5 L6contraSCL5L6-0.5
Spinal cord layer 6 L6contraSCL6L6-0.5
Spinal cord layer 4 L6contraSCL4L6-0.5
Spinal cord layer 1 L6contraSCL1L6-0.5
Lateral spinal nucleus S1contraLSpS1-0.5
Area X S1contraSCL10S1-0.5
Spinal cord layer 5 S1contraSCL5S1-0.5
Spinal cord layer 6 S1contraSCL6S1-0.5
Spinal cord layer 4 S1contraSCL4S1-0.5
Spinal cord layer 1 S1contraSCL1S1-0.5
Lateral spinal nucleus S2contraLSpS2-0.5
Area X S2contraSCL10S2-0.5
Spinal cord layer 5 S2contraSCL5S2-0.5
Spinal cord layer 6 S2contraSCL6S2-0.5
Spinal cord layer 4 S2contraSCL4S2-0.5
Spinal cord layer 1 S2contraSCL1S2-0.5
Lateral spinal nucleus S3contraLSpS3-0.5
Area X S3contraSCL10S3-0.5
Spinal cord layer 5 S3contraSCL5S3-0.5
Spinal cord layer 6 S3contraSCL6S3-0.5
Spinal cord layer 4 S3contraSCL4S3-0.5
Spinal cord layer 1 S3contraSCL1S3-0.5
Lateral spinal nucleus S4contraLSpS4-0.5
Area X S4contraSCL10S4-0.5
Spinal cord layer 5 S4contraSCL5S4-0.5
Spinal cord layer 6 S4contraSCL6S4-0.5
Spinal cord layer 4 S4contraSCL4S4-0.5
Spinal cord layer 1 S4contraSCL1S4-0.5
Lateral spinal nucleus Co1contraLSpCo1-0.5
Lateral spinal nucleus Co2contraLSpCo2-0.5
Lateral spinal nucleus Co3contraLSpCo3-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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