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Rat connectome



Intermediolateral cell column T7 left


Abbreviation
IMLT7
Color       
Superior regionsThoracal segment 7

SynonymsAbbr.Language
Intermediolateral cell column T7IMLT7Eng

SubregionsSide
Intermediolateral cell column pars funicularis T7left
Intermediolateral cell column pars principalis T7left
Intermediolateral cell column pars spinalis T7left
Sympathetic preganglionic cell column T7left

Output to

NameSideAbbr.WeightDetails
Reticulotegmental nucleusipsiRETn-0.5
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB1
Koelliker Fuse nucleusipsiKF-0.5
Gigantocellular reticular nucleusipsiGi-0.5
Nucleus of the solitary tractipsiSol1
Lateral paragigantocellular nucleusipsiLPGi-0.5
RetinaipsiRET-10
Sympathoadrenal preganglionic neuronsipsiSymAPreGang3
Adrenal preganglionic neurons T7ipsiT7APG-0.5
Sympathetic preganglionic cell column T7ipsiSpIMLT7-0.5
Lumbar segment 1ipsiL1-1
Dorsal root ganglion L3ipsiDRGL3-0.5
Dorsal root ganglion L4ipsiDRGL4-0.5
Dorsal root ganglion L5ipsiDRGL5-0.5
Dorsal root ganglion L6ipsiDRGL6-0.5
Sympathetic preganglionic cell column T7contraSpIMLT7-0.5
Adrenal preganglionic neurons T7contraT7APG-0.5
Paravertebral sympathetic gangliaipsiAutoPaGTSym-0.5
Stellate ganglionipsiAutoSteG3
Superior cervical ganglionipsiAutoSCeG-0.5
Thoracic sympathetic ganglion at level T 7ipsiAutoTSG7-0.5
Coeliaco-mesenteric ganglion complexipsiAutoParGcmgc3
Celiac ganglionipsiAutoCel-0.5
Median nerveipsimen-0.5
Tibial nerveipsitibial-0.5
Ulnar nerveipsiuln-0.5
Stellate ganglioncontraAutoSteG-0.5
Coeliaco-mesenteric ganglion complexcontraAutoParGcmgc3
CoripsiOrgsCor2
Anterior gastric wall of the corpusipsiOrgsStomaCagw0
Ventral stomach wallipsiOrgsStomVWS-0.5
Anterior gastric wall of the corpuscontraOrgsStomaCagw0
Ventral stomach wallcontraOrgsStomVWS-0.5
Distal colonipsiOrgsColonDi-0.5
Distal coloncontraOrgsColonDi-0.5
Liver lobeipsiOrgsLivL4
ForepawipsiOrgBSDFP-10
Adrenal glandipsiADRE3
Adrenal medullaipsiOrgsAM3
Adrenal medullary ganglion neuronsipsiOrgsAMgn-0.5
Vitreous humor of eyeipsiOrgVHEye3
Interscapular brown fat tissueipsiOrgisBFT1
Musculus masseteripsiMuscMass-0.5
Bulbospongiosus muscleipsiMuscbsp-0.5
Femoral bone marrowipsiOrgSkFemM-0.5
PeritoneumipsiOrgPeri-0.5
Retroperitoneal fatipsiOrgRetroF-0.5
Mammary glandipsiOrgMamG-0.5
OvaryipsiOrgOvar-0.5
Corpus cavernosumipsiOrgCC2
TestisipsiOrgTest-0.5
KidneyipsiOrgsKid2
ThymusipsiThym1
SpleenipsiOrgSPL3
Adrenal glandcontraADRE3
Adrenal medullacontraOrgsAM0
OvarycontraOrgOvar-0.5
KidneycontraOrgsKid2
ThymuscontraThym1
SpleencontraOrgSPL3
Pancreas sideipsiOrgsPancs-10
Pancreas sidecontraOrgsPancs-10

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG1
Nucleus of DarkschewitschipsiDk-0.5
Periaqueductal grayipsiPAG-0.5
Dorsomedial periaqueductal grayipsiDMPAG-0.5
Lateral periaqueductal grayipsiLPAG-0.5
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Periventricular gray matteripsiPVG-0.5
Red nucleus magnocellular partipsiRMC-0.5
Laterodorsal tegmental nucleusipsiLDTg-0.5
Edinger Westphal nucleusipsiEW-0.5
PonsipsiP0
A5 noradrenaline cellsipsiA53
A5 noradrenaline cells caudal partipsiA5C2
A5 noradrenaline cells rostral partipsiA5R2
A7 noradrenaline cellsipsiA71
Barringtons nucleusipsiBar-0.5
Locus coeruleusipsiLC3
Parapyramidal nucleusipsiPPy-0.5
Reticulotegmental nucleusipsiRETn-0.5
Magnocellular reticular nucleus alpha partipsiNRMCa-0.5
Paramedian reticular nucleusipsiPMn0
Rostroventral reticular formationipsiRFrv3
Rostroventrolateral reticular nucleusipsiRVL3
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus caudal partipsiPNC1
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF0.5
Parabrachial nucleus dorsal partipsiPBD-0.5
Gigantocellular reticular nucleusipsiGi2
Gigantocellular reticular nucleus alpha partipsiGiA1
Gigantocellular reticular nucleus ventral partipsiGiV0.5
Medial medullary reticular nucleusipsiMMdD1
Medial subnucleus reticularis ventralisipsiMSRV1
Subcoeruleus nucleusipsiSubC1
Medulla oblongataipsiMeOb-0.5
C1 adrenaline cellsipsiC12
Ambiguus nucleusipsiAmb1
Area postremaipsiAP0
Accessory trigeminal nucleusipsiAcs5-0.5
Nucleus of the solitary tractipsiSol2
Nucleus of the solitary tract caudal partipsiSolca0.5
Nucleus of the solitary tract intermediate partipsiSolIM0.5
Nucleus of the solitary tract ventral partipsiSolV0.5
Nucleus of the solitary tract ventrolateral partipsiSolVL0.5
Dorsal motor nucleus of vagusipsi101
Raphe nucleiipsiRAN-0.5
Caudal raphe nucleiipsiRANc3
Dorsal raphe nucleusipsiDR-0.5
Raphe magnus nucleusipsiRMg3
Raphe magnus nucleus caudal partipsiRMgc-0.5
Raphe obscurus nucleusipsiROb3
Raphe obscurus nucleus rostral partipsiRObr-0.5
Raphe obscurus nucleus ventral partipsiRObV2
Raphe pallidus nucleusipsiRPa3
Ventral lateral medulla oblongataipsiMVL-0.5
Caudal ventrolateral medullaipsiCVLM-0.5
Rostral ventrolateral medullaipsiRVLM3
Subretrofacial rostral ventrolateral medullaipsiSRRVLM2
A1 noradrenergic cellsipsiA13
A2 noradrenergic cellsipsiA23
Nucleus interfascicularis hypoglossiipsiNIFH-0.5
Inferior olive cap of Kooy of the medial nucleusipsiIOK-0.5
Paragigantocellular reticular nucleusipsiPGi1
Lateral paragigantocellular nucleusipsiLPGi3
Retrotrapezoid nucleusipsiRTN3
Rostral part of the ventromedial medulla oblongataipsiRMeObvm3
Medulla oblongata rostroventralipsiMeObRV-0.5
Tuberomammillary nucleusipsiTuM0
Vascular organ of the lamina terminalisipsiVOLT0
Dorsomedial hypothalamic nucleusipsiDMHy0
Lateral zoneipsiLHA3
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area posterior partipsiLHAp0.5
Tuberal division of the lateral hypothalamic areaipsiLHTC0.5
Anterior hypothalamic areaipsiAHA0
Dorsal hypothalamic areaipsiDA-0.5
Posterior hypothalamic nucleusipsiPH-0.5
Ventromedial hypothalamic nucleusipsiVMH0
Arcuate nucleusipsiArc0.5
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR-0.5
Paraventricular hypothalamic nucleus dorsal cap [Periventricular zone anterior region]ipsiPaDC3
Paraventricular nucleus of the hypothalamus magnocellular division anterior magnocellular partipsiPaAMa0.5
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP3
Paraventricular hypothalamic nucleus parvicellular division dorsal partipsiPaPcD-0.5
Paraventricular hypothalamic nucleus lateral parvocellular partipsiLPPa1
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP0.5
Paraventricular hypothalamic nucleus dorsal partipsiPaD-0.5
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo-0.5
Paraventricular hypothalamic nucleus ventral part [Periventricular zone anterior region]ipsiPaV3
Ventrolateral paraventricular hypothalamic nucleusipsiPaVM-0.5
Paraventricular hypothalamic nucleusipsiPa2.5
Middle part of the paraventricular hypothalamic nucleusipsiPaMi3
Paraventricular hypothalamic nucleus caudal levelipsiPaCa3
Paraventricular hypothalamic nucleus dorsomedial partipsiPaDoM3
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag0
Paraventricular hypothalamic nucleus magnocellular division posterior partipsiPaMagP1.5
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo1
Paraventricular hypothalamic nucleus dorsal parvocellular divisionipsiPavPoD2.5
Paraventricular hypothalamic nucleus parvocellular division lateroposterior subnucleiipsiPavPoLP3
Paraventricular hypothalamic nucleus parvocellular division ventral partipsiPavPoV0.5
Paraventricular nucleus lateral parvocellular partipsiPaLp0.5
Paraventricular hypothalamic nucleus rostral partipsiPaRo1
Paraventricular hypothalamic nucleus ventrolateral partipsiPaVL1
Paraventricular nucleus dorsal partipsiPaDo3
Paraventricular nucleus posterior partipsiPaPos3
Paraventricular nucleus ventral partipsiPaVe3
Suprachiasmatic nucleusipsiSCh0
Supraoptic nucleus [Supraoptic region]ipsiSO0
A11 dopamine cellsipsiA111
Perifornical nucleusipsiPeF3
Retrochiasmatic areaipsiRCh1
Basal retrochiasmatic areaipsiBRCh1
Parafascicular thalamic nucleus prerubral partipsiPFPR1
Subfornical organipsiSFO0
Zona incertaipsiZI1
Tuber cinereum areaipsiTC-0.5
Neurons in the lateral funiculus cervical level C3ipsiNLFC3-0.5
Bed nucleus of the stria terminalisipsiBST0
Accumbens nucleusipsiAc0
Cingulate cortex area 3 vasoregulatory regionipsiCg3vr1
Cingulate cortex area 3 vasoregulatory region layer 3ipsiCg3vrL31
Cingulate cortex area 3 vasoregulatory region layer 4ipsiCg3vrL41
Cingulate cortex area 3 vasoregulatory region layer 5ipsiCg3vrL51
Cingulate cortex area 3 vasoregulatory region layer 6ipsiCg3vrL61
Prelimbic cortexipsiPrL-0.5
Infralimbic cortexipsiIL1
Insular cortexipsiICX0
Granular insular cortexipsiGI0
Prefrontal cortexipsiPFC2
Sensory regionsipsiSR0
Lateral septal nucleusipsiLS0
Spinal cord interneuronsipsiMESin-0.5
Dorsal root ganglion L3ipsiDRGL3-10
Dorsal root ganglion L4ipsiDRGL4-10
Dorsal root ganglion L5ipsiDRGL5-10
Dorsal root ganglion L6ipsiDRGL6-10
A5 noradrenaline cellscontraA53
Locus coeruleuscontraLC1
Rostroventral reticular formationcontraRFrv3
Rostroventrolateral reticular nucleuscontraRVL3
Pontine reticular nucleus caudal partcontraPNC0.5
Koelliker Fuse nucleuscontraKF0.5
Gigantocellular reticular nucleuscontraGi0.5
Gigantocellular reticular nucleus alpha partcontraGiA0.5
Medial medullary reticular nucleuscontraMMdD1
Medial subnucleus reticularis ventraliscontraMSRV1
Medulla oblongatacontraMeOb-0.5
C1 adrenaline cellscontraC11.5
Accessory trigeminal nucleuscontraAcs5-0.5
Nucleus of the solitary tractcontraSol-0.5
Nucleus of the solitary tract caudal partcontraSolca0.5
Caudal raphe nucleicontraRANc1
Raphe magnus nucleuscontraRMg1
Raphe obscurus nucleuscontraROb1
Raphe pallidus nucleuscontraRPa1
Ventral lateral medulla oblongatacontraMVL-0.5
Rostral ventrolateral medullacontraRVLM3
Subretrofacial rostral ventrolateral medullacontraSRRVLM1
Nucleus interfascicularis hypoglossicontraNIFH-0.5
Inferior olive cap of Kooy of the medial nucleuscontraIOK-0.5
Paragigantocellular reticular nucleuscontraPGi1
Retrotrapezoid nucleuscontraRTN1
Medulla oblongata rostroventralcontraMeObRV-0.5
Lateral zonecontraLHA2.5
Lateral hypothalamic areacontraLH0.5
Arcuate nucleuscontraArc0.5
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]contraPaMP-0.5
Paraventricular hypothalamic nucleus lateral parvocellular partcontraLPPa0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Paraventricular hypothalamic nucleus dorsal parvocellular divisioncontraPavPoD0.5
Paraventricular hypothalamic nucleus parvocellular division ventral partcontraPavPoV0.5
Paraventricular nucleus dorsal partcontraPaDo1
Paraventricular nucleus posterior partcontraPaPos1
Paraventricular nucleus ventral partcontraPaVe1
A11 dopamine cellscontraA110.5
Perifornical nucleuscontraPeF2.5
Retrochiasmatic areacontraRCh0.5
Parafascicular thalamic nucleus prerubral partcontraPFPR0.5
Cingulate cortex area 3 vasoregulatory regioncontraCg3vr1
Cingulate cortex area 3 vasoregulatory region layer 3contraCg3vrL31
Cingulate cortex area 3 vasoregulatory region layer 4contraCg3vrL41
Cingulate cortex area 3 vasoregulatory region layer 5contraCg3vrL51
Cingulate cortex area 3 vasoregulatory region layer 6contraCg3vrL61
Infralimbic cortexcontraIL1
Insular cortexcontraICX0
Sensory regionscontraSR0
Greater splanchnic nerveipsiAutoNGS2
PeritoneumipsiOrgPeri-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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