University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Interpeduncular nucleus intermediate subnucleus left


Abbreviation
IPI
Color       
Superior regionsInterpeduncular nucleus

SynonymsAbbr.Language
 IPNi 
Interpeduncular nucleus intermediate part  
Interpeduncular nucleus intermediate subnucleusIPIEng

SubregionsSide
Interpeduncular nucleus intermediate subnucleus caudal partleft
Ventral part of the interpeduncular nucleus intermediate subnucleusleft

Output to

NameSideAbbr.WeightDetails
Nucleus incertus pars compactaipsiNIc1
Dorsal raphe nucleus caudal partipsiDRC1
Median raphe nucleusipsiMnR3
Paramedian raphe nucleusipsiPMnR3
Medial septal nucleusipsiMS0.5
Medial habenular nucleusipsiMHb3
Diagonal band of BrocacontraDBB0.5

Input from

NameSideAbbr.WeightDetails
MesencephalonipsiMEC-0.5
Central grayipsiCG2.5
Central gray mesencephalic part ventromedial partipsiCGMvm2.5
Periaqueductal grayipsiPAG1
Laterodorsal tegmental nucleusipsiLDTg4
Laterodorsal tegmental nucleus medial halfipsiLDTgmh2.5
Ventral tegmental nucleusipsiVTg0.5
Dorsal tegmental nucleusipsiDTg2.5
Dorsal tegmental nucleus caudal partipsiDTgCa2.5
PonsipsiP-0.5
Lateral pontine nucleusipsiLPn-0.5
Nucleus incertusipsiNI2
Nucleus incertus pars compactaipsiNIc0.5
Nucleus incertus pars dissipataipsiNId0.5
Ventral pontine nucleus caudalisipsiVBPNc-0.5
Medial reticular formationipsiRFm2
Pontine reticular nucleusipsiPRN1
Median raphe nucleusipsiMnR3
Median raphe nucleus rostrocaudal extentipsiMnRrc2.5
Paramedian raphe nucleusipsiPMnR3
Diagonal band of BrocaipsiDBB0.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB0.5
Medial septal nucleusipsiMS0.5
Basal nucleus MeynertipsiB1.5
Lateral preoptic areaipsiLPO2
Magnocellular preoptic nucleusipsiMCPO-0.5
HypothalamusipsiHYPO-0.5
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area perifornical partipsiPFx1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Posterior hypothalamic areaipsiPHA1
ThalamusipsiT-0.5
HabenulaipsiHAB2
Lateral habenular nucleusipsiLHb2.5
Medial habenular nucleusipsiMHb2.5
Medial habenular nucleus dorsal partipsiMHbd2
Medial habenular nucleus lateral partipsiMHbL2.5
Medial habenular nucleus ventral partipsiMHbv3
Medial lemniscusipsiml-0.5
Ventromedial margin of the nucleus accumbensipsiAcbVMm1
Retrosplenial agranular cortexipsiRSA-0.5
Anterior cingulate cortexipsiACC-0.5
Prelimbic cortexipsiPrL-0.5
Septal regionipsiSER-0.5
Central graycontraCG2.5
Central gray mesencephalic part ventromedial partcontraCGMvm2.5
Laterodorsal tegmental nucleuscontraLDTg-0.5
Laterodorsal tegmental nucleus medial halfcontraLDTgmh2.5
Dorsal tegmental nucleuscontraDTg2.5
Dorsal tegmental nucleus caudal partcontraDTgCa2.5
Nucleus of the horizontal limb of the diagonal bandcontraHDB0.5
Basal nucleus MeynertcontraB1.5
Lateral habenular nucleuscontraLHb2.5
Medial habenular nucleuscontraMHb2.5
Medial habenular nucleus dorsal partcontraMHbd-0.5
Medial habenular nucleus lateral partcontraMHbL2.5
Medial habenular nucleus ventral partcontraMHbv3
Ventromedial margin of the nucleus accumbenscontraAcbVMm-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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