University of Rostock

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Rat connectome



Lateral entorhinal cortex ventromedial part left


Abbreviation
VMEAL
Color       
Superior regionsLateral entorhinal cortex

SynonymsAbbr.Language
Lateral entorhinal cortex ventromedial partVMEALEng

Output to

NameSideAbbr.WeightDetails
Basal nucleusipsiBnc2
Accessory basal nucleusipsiAB3
Accessory basal nucleus medial partipsiABme3
Basal dorsal nucleus medial partipsiBDM2
Basomedial amygdaloid nucleusipsiBM3
Lateral amygdaloid nucleusipsiLA3
Lateral nucleus caudal partipsiLAcap3
Lateral nucleus medial partipsiLAM3
Lateral nucleus ventral portionipsiLAVp2
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA1
Central amygdaloid nucleusipsiCe1
Nucleus of the lateral olfactory tractipsiLOT-0.5
Medial amygdaloid nucleusipsiMe1
Medial amygdaloid nucleus anterodorsal partipsiMeAD-0.5
Amygdalohippocampal areaipsiAHi1
Posteromedial cortical nucleusipsiPMCo-0.5
Intercalated nuclei of the amygdalaipsiI0.5
Dentate gyrus temporal partipsiDGT-0.5
Dentate gyrus septal partipsiDGs-0.5
Intermediate septotemporal part of the dentate gyrusipsiDGint-0.5
Field CA1 of hippocampus temporal partipsiCA1t-0.5
Field CA1 of hippocampus septal partipsiCA1sep-0.5
Field CA3 of hippocampus temporal partipsiCA3T-0.5
Septal part of the field CA3 of hippocampusipsiSCA3-0.5
Subiculum septal partipsiSse-0.5
Subiculum temporal partipsiSTe-0.5
Presubiculum temporal partipsiPrST-0.5
Parasubiculum temporal partipsiPaStemp-0.5
Lateral entorhinal cortex intermediate septotemporal partipsiLEntimt-0.5
Medial entorhinal cortex dorsolateral partipsiMEntdL-0.5
Medial entorhinal cortex intemediate dorsolateral-ventromedial partipsiMEntimt-0.5
Medial entorhinal cortex ventromedial partipsiMEntvm-0.5
Perirhinal cortexipsiA35-0.5
Ectorhinal cortexipsiA36-0.5
Postrhinal cortexipsiPOR-0.5
External plexiform layer of the olfactory bulbipsiOBepl1
Glomerular layer of the olfactory bulbipsiOBglo2
Olfactory cortex layer 1bipsiONL1b3

Input from

NameSideAbbr.WeightDetails
Ventral tegmental area A10ipsiVTA1
Peripeduncular nucleusipsiPP1
Locus coeruleusipsiLC3
Lateral parabrachial nucleus external partipsiLPBE1
Nucleus of the solitary tractipsiSol1
Dorsal raphe nucleusipsiDR1
Median raphe nucleusipsiMnR2
Dorsal endopiriform nucleusipsiDEn2
Ventral endopiriform nucleusipsiVEn1
Diagonal band of BrocaipsiDBB2
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Medial septal nucleusipsiMS2
Basal nucleus Meynert anterior partipsiBan1.5
Magnocellular preoptic nucleusipsiMCPO1
Tenia tectaipsiTT1
Tuberomammillary nucleusipsiTuM2
Lateral hypothalamic areaipsiLH1
Posterior hypothalamic areaipsiPHA1
Ventromedial hypothalamic nucleusipsiVMH2
Premammillary nucleus ventral partipsiPMV1
Supramammillar nucleusipsiSuM1
Central medial thalamic nucleusipsiCM1
Posterior thalamic nuclear groupipsiPo1
Intermediodorsal thalamic nucleusipsiIMD1
Mediodorsal thalamic nucleus medial partipsiMDM1
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleus anterior partipsiPVA3
Paraventricular thalamic nucleus posterior partipsiPVP1
Reuniens thalamic nucleusipsiRe3
Subparafascicular thalamic nucleusipsiSPF1
Anterior basolateral nucleusipsiBLA1
Posterior basolateral nucleusipsiBLP1
Basomedial amygdaloid nucleusipsiBM0
Anterior basomedial nucleusipsiBMA1
Posterior basomedial nucleusipsiBMP1
Lateral amygdaloid nucleusipsiLA0
Bed nucleus of the stria terminalis lateral divisionipsiBSTL1
Bed nucleus of the stria terminalis medial divisionipsiBSTM1
Central amygdaloid nucleusipsiCe1
Central amygdaloid nucleus lateral divisionipsiCeL1
Sublenticular extended amygdalaipsiSLEA1
Amygdalopiriform transition areaipsiAPir1
Anterior amygdaloid areaipsiAA1
Anterior cortical amygdaloid nucleusipsiACo1
Posterolateral cortical nucleusipsiPLCo1
Medial amygdaloid nucleus anterodorsal partipsiMeAD1
Medial amygdaloid nucleus anteroventral partipsiMeAV1
Medial amygdaloid nucleus posterodorsal partipsiMePD1
Medial amygdaloid nucleus posteroventral partipsiMePV2
Amygdalohippocampal areaipsiAHi1
Bed nucleus of the accessory olfactory tractipsiBAOT1
Posteromedial cortical nucleusipsiPMCo3
ClaustrumipsiCl1
Ventral pallidumipsiVP1
Parasubthalamic nucleusipsiPSTh1
Field CA1 of hippocampusipsiCA13
SubiculumipsiS3
Subiculum temporal partipsiSTe-0.5
ParasubiculumipsiPaS1
Lateral entorhinal cortexipsiLEnt3
Lateral entorhinal cortex intermediate septotemporal partipsiLEntimt-0.5
Medial entorhinal cortexipsiMEnt1
Medial entorhinal cortex intemediate dorsolateral-ventromedial partipsiMEntimt-0.5
Medial entorhinal cortex ventromedial partipsiMEntvm-0.5
Anterior piriform cortexipsiAPIRC-3
Posterior piriform cortexipsiPPIRC2
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL1
Agranular insular cortex posterior partipsiAIP1
Agranular insular cortex ventral partipsiAIV1
Perirhinal cortexipsiA35-0.5
Perirhinal cortex dorsal portionipsiPRhd1
Perirhinal cortex ventral portionipsiPRhv1
Ectorhinal cortexipsiA36-0.5
Postrhinal cortexipsiPOR-0.5
Dorsal peduncular cortexipsiDP3
Medial orbital cortexipsiMO1
Interpeduncular nucleusipsiIP3
Olfactory bulb A16ipsiMOB3
Anterior olfactory nucleusipsiAON1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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