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Rat connectome



Accessory basal nucleus left


Abbreviation
AB
Color       
Superior regionsBasal nucleus

SynonymsAbbr.Language
Basal amygdaloid nucleus  
Accessory basal amygdaloid nucleus  
Accessory basal nucleus of amygdala  
Accessory basal nucleus of the amygdala  
Accessory basal nucleusABEng
Accessory basal amygdaloid nucleusABAEng

SubregionsSide
Accessory basal nucleus caudal partleft
Accessory basal nucleus magnocellular divisionleft
Accessory basal nucleus medial partleft
Accessory basal nucleus midrostrocaudal partleft
Accessory basal nucleus parvicellular divisionleft
Accessory basal nucleus rostral partleft
Superficial accessory basal nucleusleft

Output to

NameSideAbbr.WeightDetails
Central tegmental field lateral partipsiTGACL0
Dorsal raphe nucleusipsiDR2
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Substantia innominataipsiSI3
Preoptic regionipsiPREO2
Lateral hypothalamic areaipsiLH2
Tuberal nucleusipsiTU3
Anterior hypothalamic areaipsiAHA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Posterior hypothalamic areaipsiPHA2
Ventromedial hypothalamic nucleusipsiVMH3
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR2
Premammillary nucleusipsiPMAN2
Supramammillar nucleusipsiSuM2
Retrochiasmatic areaipsiRCh2
Mediodorsal thalamic nucleusipsiMD2
Mediodorsal thalamic nucleus central partipsiMDC1
Mediodorsal thalamic nucleus medial partipsiMDM1
Midline group of the dorsal thalamusipsiMTN3
Basal nucleusipsiBnc1
Accessory basal nucleusipsiAB2
Accessory basal nucleus magnocellular divisionipsiABm-3
Accessory basal nucleus parvicellular divisionipsiABp-3
Basal nucleus intermediate divisionipsiBnci-3
Basal nucleus magnocellular partipsiBmc-3
Basal nucleus parvicellular partipsiBpc-3
Lateral amygdaloid nucleusipsiLA2
Dorsolateral part of the lateral nucleusipsiLaDL-3
Lateral nucleus medial partipsiLAM1
Ventrolateral part of the lateral nucleusipsiLaVL1
Bed nucleus of the stria terminalisipsiBST3
Central amygdaloid nucleusipsiCe4
Central amygdaloid nucleus intermediate divisionipsiCeI-3
Central amygdaloid nucleus lateral divisionipsiCeL-3
Central amygdaloid nucleus lateral division capsular partipsiCeC-3
Central amygdaloid nucleus medial divisionipsiCeM-1
Anterior amygdaloid areaipsiAA1
Anterior cortical amygdaloid nucleusipsiACo1
Posterior amygdaloid nucleusipsiCOAp2
Nucleus of the lateral olfactory tractipsiLOT1
Periamygdaloid complexipsiPAC2
Periamygdaloid complex medial divisionipsiPACm1
Periamygdaloid complex sulcal divisionipsiPACs1
Medial amygdaloid nucleusipsiMe2
Medial amygdaloid nucleus caudal partipsiMeC-3
Medial amygdaloid nucleus central dorsal partipsiMeCD-3
Medial amygdaloid nucleus central ventral partipsiMeCV-3
Medial amygdaloid nucleus rostral partipsiMeRo-3
Amygdalohippocampal areaipsiAHi2
Amygdalohippocampal area lateral partipsiAHilp-3
Amygdalohippocampal area medial partipsiAHimp-3
Bed nucleus of the accessory olfactory tractipsiBAOT1
Intercalated nuclei of the amygdalaipsiI1
Peripallidal regionipsiPePa0
Subpallidal regionipsiSuPa1
Accumbens nucleusipsiAc3
Accumbens nucleus coreipsiAcbC2
Accumbens nucleus shellipsiAcbSh3
Lateral accumbens shellipsiAcbShl1
Medial accumbens shellipsiAcbShm2
Central accumbensipsiAcbCe2
Medial accumbensipsiAcbM-1
Caudate putamenipsiCPu3
HippocampusipsiHIPP2
Field CA1 of hippocampusipsiCA13
SubiculumipsiS2
Parietal rhinal cortexipsiPaRH2
ParasubiculumipsiPaS3
Entorhinal cortexipsiEnt2
Amygdaloentorhinal transitional field 6ipsiAE1
Piriform cortexipsiPir2
Prelimbic cortexipsiPrL2
Infralimbic cortexipsiIL3
Parietal cortex ventral areaipsiParV2
Temporal association area 2ipsiTe22
Temporal association area 3ipsiTe32
Agranular insular cortex dorsal partipsiAID2
Agranular insular cortex posterior partipsiAIP2
Agranular insular cortex ventral partipsiAIV2
Perirhinal cortexipsiA353
Perirhinal cortex dorsal portionipsiPRhd3
Perirhinal cortex ventral portionipsiPRhv3
Ectorhinal cortexipsiA361
Postrhinal cortexipsiPOR2
Prefrontal cortexipsiPFC-1
Anterior olfactory nucleusipsiAON2
Olfactory tubercleipsiTuO2
Lateral septal nucleusipsiLS2
Accessory basal nucleuscontraAB-0.5
Basomedial nucleus intermediate divisioncontraABi-1
Medial amygdaloid nucleuscontraMe-0.5
Lateral accumbens shellcontraAcbShl1
Perirhinal cortexcontraA351

Input from

NameSideAbbr.WeightDetails
Peripeduncular nucleusipsiPP2
Nucleus incertus pars compactaipsiNIc3
Endopiriform systemipsiEnN3
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Substantia innominataipsiSI2
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR-1
Anterior hypothalamic areaipsiAHA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Posterior hypothalamic areaipsiPHA2
Posterior hypothalamic nucleusipsiPH0.5
Ventromedial hypothalamic nucleusipsiVMH2
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR3
Premammillary nucleusipsiPMAN2
Perifornical nucleusipsiPeF3
Retrochiasmatic areaipsiRCh2
Posterior thalamic nuclear groupipsiPo2
Posterior thalamic nuclear group triangular partipsiPoT2
Suprageniculate thalamic nucleusipsiSG2
Paratenial thalamic nucleusipsiPT2
Paraventricular thalamic nucleusipsiPV-1
Paraventricular thalamic nucleus posterior partipsiPVP0.5
Posterior intralaminar thalamic nucleusipsiPIL1
Subparafascicular thalamic nucleusipsiSPF2
Lateral habenular nucleusipsiLHb0.5
Basal nucleusipsiBnc1
Accessory basal nucleusipsiAB2
Accessory basal nucleus magnocellular divisionipsiABm-3
Accessory basal nucleus parvicellular divisionipsiABp-3
Basal nucleus intermediate divisionipsiBnci-3
Basal nucleus magnocellular partipsiBmc1
Basal nucleus parvicellular partipsiBpc1
Basomedial nucleus magnocellular divisionipsiABmc0
Lateral amygdaloid nucleusipsiLA2.5
Dorsolateral part of the lateral nucleusipsiLaDL-3
Lateral nucleus medial partipsiLAM0
Lateral nucleus midrostrocaudal partipsiLAmr2
Ventrolateral part of the lateral nucleusipsiLaVL-3
Central amygdaloid nucleusipsiCe0
Central amygdaloid nucleus intermediate divisionipsiCeI-3
Central amygdaloid nucleus lateral divisionipsiCeL-3
Central amygdaloid nucleus lateral division capsular partipsiCeC-3
Central amygdaloid nucleus medial divisionipsiCeM-3
Amygdalopiriform transition area medial part caudal aspectipsiAPirMc1
Anterior amygdaloid areaipsiAA1
Anterior cortical amygdaloid nucleusipsiACo1
Posterior amygdaloid nucleusipsiCOAp1
Nucleus of the lateral olfactory tractipsiLOT2
Periamygdaloid complexipsiPAC1
Periamygdaloid complex medial divisionipsiPACm-3
Periamygdaloid complex sulcal divisionipsiPACs-3
Medial amygdaloid nucleusipsiMe2
Medial amygdaloid nucleus caudal partipsiMeC4
Medial amygdaloid nucleus central dorsal partipsiMeCD-3
Medial amygdaloid nucleus central ventral partipsiMeCV-3
Medial amygdaloid nucleus rostral partipsiMeRo-3
Amygdalohippocampal areaipsiAHi1
Amygdalohippocampal area lateral partipsiAHilp-3
Amygdalohippocampal area medial partipsiAHimp-3
Bed nucleus of the accessory olfactory tractipsiBAOT-3
Amygdalostriatal transition area rostrocaudal partipsiAStrrc2
Intercalated nuclei of the amygdalaipsiI-3
Peripallidal regionipsiPePa0
Subpallidal regionipsiSuPa1
Field CA1 of hippocampusipsiCA12
Field CA1 of hippocampus layersipsiCA1L1
Field CA1 of hippocampus temporal partipsiCA1t1.5
SubiculumipsiS2.5
Subiculum ventral part medial partipsiSvm3
Parietal rhinal cortexipsiPaRH4
Entorhinal cortexipsiEnt3
Dorsolateral entorhinal cortexipsiDLEnt2
Dorsolateral entorhinal cortex layersipsiDLEntL-0.5
Lateral entorhinal cortex ventromedial partipsiVMEAL3
Ventrolateral entorhinal cortexipsiVLENT3
Ventrolateral entorhinal cortex layersipsiVLENTL3
Piriform cortexipsiPir3
Prelimbic cortexipsiPrL2
Infralimbic cortexipsiIL3
Temporal association area 2ipsiTe21.5
Temporal association area 3 ventrocaudal portionipsiTe3vc1
Agranular insular cortexipsiAI-1
Agranular insular cortex posterior partipsiAIP3
Agranular insular cortex ventral partipsiAIV2
Gustatory dysgranular insular cortexipsiDIg2
Visceral dysgranular insular cortexipsiDIv2
Perirhinal cortexipsiA353
Fundus of the perirhinal cortex xipsiFPRh3
Perirhinal cortex dorsal portionipsiPRhd3
Perirhinal cortex ventral portionipsiPRhv3
Ectorhinal cortexipsiA362
Dorsal peduncular cortexipsiDP1.5
Prefrontal cortexipsiPFC-1
Lateral orbital cortexipsiLO-0.5
Medial orbital cortexipsiMO1.5
Medial geniculate nucleus medial partipsiMGM2
Anterior olfactory nucleusipsiAON-1
Accessory basal nucleuscontraAB-0.5
Accessory basal nucleus parvicellular divisioncontraABp1
Basal nucleus intermediate divisioncontraBnci1
Infralimbic cortexcontraIL0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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