University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Middle part of the retrorubral field left


Abbreviation
RRmi
Color       
Superior regionsRetrorubral nucleus

SynonymsAbbr.Language
Middle part of the retrorubral fieldRRmiEng

Output to

NameSideAbbr.WeightDetails
Caudate putamenipsiCPu0
Caudate putamencontraCPu0

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG3
Periaqueductal grayipsiPAG3
Ventrolateral periaqueductal grayipsiVLPAG0
Superior colliculus deep layersipsiSCd3
Rostromedial tegmental nucleusipsiRMTg2
Substantia nigra compact partipsiSNC2
Substantia nigra reticular partipsiSNR2
Ventral tegmental area A10ipsiVTA1
Laterodorsal tegmental nucleusipsiLDTg3
Pedunculopontine tegmental nucleusipsiPPTg3
Deep cerebellar nucleiipsiDNC2
Deep mesencephalic nucleusipsiDpMe3
Pontine reticular nucleus oral partipsiPnO2
Pontine reticular nucleus caudal partipsiPNC2
Cuneiforme nucleusipsiCnF3
Parabrachial nucleusipsiPB3
Gigantocellular reticular nucleus medial partipsiGiM3
Nucleus of the solitary tractipsiSol2
Dorsal raphe nucleusipsiDR2
Median raphe nucleusipsiMnR0
Septal-diagonal band of Broca complexipsiDBBs0
Lateral preoptic areaipsiLPO2
Medial preoptic areaipsiMPA3
Median preoptic areaipsiMnPA1
Lateral hypothalamic areaipsiLH3
Mediobasal hypothalamusipsiMeHypo0
Posterior hypothalamic areaipsiPHA2
Caudal third of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAPct0
Paraventricular hypothalamic nucleusipsiPa2
Periventricular hypothalamic nucleusipsiPe0
Mammillary bodyipsiCMAM0
Supramammillar nucleusipsiSuM0
A8 dopamine cells retrorubral groupipsiRRF3
Parafascicular thalamic nucleusipsiPF3
Ventromedial thalamic nucleusipsiVM2
Posterior intralaminar thalamic nucleusipsiPIL1
Zona incertaipsiZI3
Lateral habenular nucleusipsiLHb2
Medial habenular nucleusipsiMHb0
Bed nucleus of the stria terminalis lateral division dorsal partipsiBSTLD1
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV3
Bed nucleus of the stria terminalis medial division ventral partipsiBSTMV3
Bed nucleus of the stria terminalis medial division dorsal partipsiBSTMd3
Central amygdaloid nucleus lateral divisionipsiCeL3
Central amygdaloid nucleus medial divisionipsiCeM1
Sublenticular extended amygdalaipsiSLEA3
Anterior amygdaloid areaipsiAA3
Medial amygdaloid nucleusipsiMe0
ClaustrumipsiCl1
Globus pallidusipsiGP0
Medial globus pallidusipsiMGP1
Ventral pallidumipsiVP2
Ventral pallidum subcommissural partipsiVPsc1
Accumbens nucleus coreipsiAcbC1
Accumbens nucleus rostral partipsiAcR1
Lateral accumbens shellipsiAcbShl2
Medial accumbens shellipsiAcbShm1
Ventromedial accumbensipsiAcbVM1
Caudate putamenipsiCPu0
Ventral striatumipsiCPuv0
Ventralmost tier of caudate putamen extending from the lateral ventricle to external capsule ipsiCPuvmt3
Ventrolateral striatumipsiCPuvl0
Marginal DivisionipsiMrD0
Subthalamic nucleusipsiSTh0
Parasubthalamic nucleusipsiPSTh0
Anterior cingulate cortexipsiACC2
Prelimbic cortexipsiPrL2
Infralimbic cortexipsiIL2
Frontal association cortexipsiFrA2
Agranular insular cortexipsiAI3
Dysgranular insular cortexipsiDI1
Granular insular cortexipsiGI1
Dorsal peduncular cortexipsiDP2
Lateral agranular prefrontal cortexipsiAGl0
Medial agranular prefrontal cortexipsiAGm0
Primary somatosensory cortexipsiS10
Secondary somatosensory cortexipsiS20
Lateral orbital cortexipsiLO1
Medial orbital cortexipsiMO1
Interpeduncular nucleusipsiIP0
Lateral septal nucleusipsiLS0
Superior colliculus deep layerscontraSCd0
Laterodorsal tegmental nucleuscontraLDTg1.5
Pedunculopontine tegmental nucleuscontraPPTg1.5
Deep mesencephalic nucleuscontraDpMe1.5
Pontine reticular nucleus oral partcontraPnO1
Pontine reticular nucleus caudal partcontraPNC1
Cuneiforme nucleuscontraCnF1.5
Parabrachial nucleuscontraPB1.5
Principal sensory trigeminal nucleus ventrolateral partcontraPr5VL1
Dorsal raphe nucleuscontraDR1
Median raphe nucleuscontraMnR0
ClaustrumcontraCl0.5
Anterior cingulate cortexcontraACC1
Prelimbic cortexcontraPrL1
Infralimbic cortexcontraIL1
Agranular insular cortexcontraAI1.5
Dorsal peduncular cortexcontraDP1
Lateral orbital cortexcontraLO0.5
Medial orbital cortexcontraMO0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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