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Rat connectome



Paraventricular hypothalamic nucleus dorsal part left


Abbreviation
PaD
Color       
Superior regionsNucleus paraventricularis [Periventricular zone anterior region]

SynonymsAbbr.Language
Paraventricular hypothalamic nucleus dorsal partPaDEng
Dorsal paraventricular nucleus  

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG3
Raphe magnus nucleusipsiRMg-0.5
Raphe pallidus nucleusipsiRPa-0.5
Median eminenceipsiME2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0
Arcuate nucleusipsiArc-0.5
Paraventricular nucleus medial parvocellular partipsiPaMep-0.5
Pineal glandipsiPi-0.5
Rostrocaudal extent of the central amygdaloid nucleus lateral division medial partipsiCeLmrc-0.5
Central amygdaloid nucleus lateral division rostral partipsiCeLR-0.5
Accumbens nucleus shellipsiAcbSh-0.5
Intermediolateral cell columnipsiIML-0.5
Cervical segment 1ipsiCS13
Intermediolateral cell column C1ipsiIMLC1-0.5
Spinal cord layer 3 C1ipsiSCL3C1-0.5
Spinal cord layer 1 C1ipsiSCL1C1-0.5
Spinal cord layer 2 C1ipsiSCL2C1-0.5
Cervical segment 2ipsiCS23
Intermediolateral cell column C2ipsiIMLC2-0.5
Spinal cord layer 3 C2ipsiSCL3C2-0.5
Spinal cord layer 1 C2ipsiSCL1C2-0.5
Spinal cord layer 2 C2ipsiSCL2C2-0.5
Intermediolateral cell column C3ipsiIMLC3-0.5
Spinal cord layer 3 C3ipsiSCL3C3-0.5
Spinal cord layer 1 C3ipsiSCL1C3-0.5
Spinal cord layer 2 C3ipsiSCL2C3-0.5
Intermediolateral cell column C4ipsiIMLC4-0.5
Spinal cord layer 3 C4ipsiSCL3C4-0.5
Spinal cord layer 1 C4ipsiSCL1C4-0.5
Spinal cord layer 2 C4ipsiSCL2C4-0.5
Intermediolateral cell column C5ipsiIMLC5-0.5
Spinal cord layer 3 C5ipsiSCL3C5-0.5
Spinal cord layer 1 C5ipsiSCL1C5-0.5
Spinal cord layer 2 C5ipsiSCL2C5-0.5
Intermediolateral cell column C6ipsiIMLC6-0.5
Spinal cord layer 3 C6ipsiSCL3C6-0.5
Spinal cord layer 1 C6ipsiSCL1C6-0.5
Spinal cord layer 2 C6ipsiSCL2C6-0.5
Intermediolateral cell column C7ipsiIMLC7-0.5
Spinal cord layer 3 C7ipsiSCL3C7-0.5
Spinal cord layer 1 C7ipsiSCL1C7-0.5
Spinal cord layer 2 C7ipsiSCL2C7-0.5
Intermediolateral cell column C8ipsiIMLC8-0.5
Spinal cord layer 3 C8ipsiSCL3C8-0.5
Spinal cord layer 1 C8ipsiSCL1C8-0.5
Spinal cord layer 2 C8ipsiSCL2C8-0.5
Intermediolateral cell column T1ipsiIMLT1-0.5
Area X T1ipsiSCL10T1-0.5
Spinal cord layer 3 T1ipsiSCL3T1-0.5
Spinal cord layer 1 T1ipsiSCL1T1-0.5
Spinal cord layer 2 T1ipsiSCL2T1-0.5
Ventral horn T1ipsiVHT1-0.5
Intermediolateral cell column T2ipsiIMLT2-0.5
Area X T2ipsiSCL10T2-0.5
Spinal cord layer 3 T2ipsiSCL3T2-0.5
Spinal cord layer 1 T2ipsiSCL1T2-0.5
Spinal cord layer 2 T2ipsiSCL2T2-0.5
Ventral horn T2ipsiVHT2-0.5
Intermediolateral cell column T3ipsiIMLT3-0.5
Area X T3ipsiSCL10T3-0.5
Spinal cord layer 3 T3ipsiSCL3T3-0.5
Spinal cord layer 1 T3ipsiSCL1T3-0.5
Spinal cord layer 2 T3ipsiSCL2T3-0.5
Ventral horn T3ipsiVHT3-0.5
Intermediolateral cell column T4ipsiIMLT4-0.5
Area X T4ipsiSCL10T4-0.5
Spinal cord layer 3 T4ipsiSCL3T4-0.5
Spinal cord layer 1 T4ipsiSCL1T4-0.5
Spinal cord layer 2 T4ipsiSCL2T4-0.5
Ventral horn T4ipsiVHT4-0.5
Intermediolateral cell column T5ipsiIMLT5-0.5
Area X T5ipsiSCL10T5-0.5
Spinal cord layer 3 T5ipsiSCL3T5-0.5
Spinal cord layer 1 T5ipsiSCL1T5-0.5
Spinal cord layer 2 T5ipsiSCL2T5-0.5
Ventral horn T5ipsiVHT5-0.5
Intermediolateral cell column T6ipsiIMLT6-0.5
Area X T6ipsiSCL10T6-0.5
Spinal cord layer 3 T6ipsiSCL3T6-0.5
Spinal cord layer 1 T6ipsiSCL1T6-0.5
Spinal cord layer 2 T6ipsiSCL2T6-0.5
Ventral horn T6ipsiVHT6-0.5
Intermediolateral cell column T7ipsiIMLT7-0.5
Area X T7ipsiSCL10T7-0.5
Spinal cord layer 3 T7ipsiSCL3T7-0.5
Spinal cord layer 1 T7ipsiSCL1T7-0.5
Spinal cord layer 2 T7ipsiSCL2T7-0.5
Ventral horn T7ipsiVHT7-0.5
Intermediolateral cell column T8ipsiIMLT8-0.5
Area X T8ipsiSCL10T8-0.5
Spinal cord layer 3 T8ipsiSCL3T8-0.5
Spinal cord layer 1 T8ipsiSCL1T8-0.5
Spinal cord layer 2 T8ipsiSCL2T8-0.5
Ventral horn T8ipsiVHT8-0.5
Intermediolateral cell column T9ipsiIMLT9-0.5
Area X T9ipsiSCL10T9-0.5
Spinal cord layer 3 T9ipsiSCL3T9-0.5
Spinal cord layer 1 T9ipsiSCL1T9-0.5
Spinal cord layer 2 T9ipsiSCL2T9-0.5
Ventral horn T9ipsiVHT9-0.5
Intermediolateral cell column T10ipsiIMLT10-0.5
Area X T10ipsiSCL10T10-0.5
Spinal cord layer 3 T10ipsiSCL3T10-0.5
Spinal cord layer 1 T10ipsiSCL1T10-0.5
Spinal cord layer 2 T10ipsiSCL2T10-0.5
Ventral horn T10ipsiVHT10-0.5
Intermediolateral cell column T11ipsiIMLT11-0.5
Area X T11ipsiSCL10T11-0.5
Spinal cord layer 3 T11ipsiSCL3T11-0.5
Spinal cord layer 1 T11ipsiSCL1T11-0.5
Spinal cord layer 2 T11ipsiSCL2T11-0.5
Ventral horn T11ipsiVHT11-0.5
Intermediolateral cell column T12ipsiIMLT12-0.5
Area X T12ipsiSCL10T12-0.5
Spinal cord layer 3 T12ipsiSCL3T12-0.5
Spinal cord layer 1 T12ipsiSCL1T12-0.5
Spinal cord layer 2 T12ipsiSCL2T12-0.5
Ventral horn T12ipsiVHT12-0.5
Intermediolateral cell column T13ipsiIMLT13-0.5
Area X T13ipsiSCL10T13-0.5
Spinal cord layer 3 T13ipsiSCL3T13-0.5
Spinal cord layer 1 T13ipsiSCL1T13-0.5
Spinal cord layer 2 T13ipsiSCL2T13-0.5
Ventral horn T13ipsiVHT13-0.5
Intermediolateral cell column L1ipsiIMLL1-0.5
Area X L1ipsiSCL10L1-0.5
Spinal cord layer 3 L1ipsiSCL3L1-0.5
Spinal cord layer 1 L1ipsiSCL1L1-0.5
Spinal cord layer 2 L1ipsiSCL2L1-0.5
Intermediolateral cell column L2ipsiIMLL2-0.5
Area X L2ipsiSCL10L2-0.5
Spinal cord layer 3 L2ipsiSCL3L2-0.5
Spinal cord layer 1 L2ipsiSCL1L2-0.5
Spinal cord layer 2 L2ipsiSCL2L2-0.5
Intermediolateral cell column L3ipsiIMLL3-0.5
Area X L3ipsiSCL10L3-0.5
Spinal cord layer 3 L3ipsiSCL3L3-0.5
Spinal cord layer 1 L3ipsiSCL1L3-0.5
Spinal cord layer 2 L3ipsiSCL2L3-0.5
Intermediolateral cell column L4ipsiIMLL4-0.5
Area X L4ipsiSCL10L4-0.5
Spinal cord layer 3 L4ipsiSCL3L4-0.5
Spinal cord layer 1 L4ipsiSCL1L4-0.5
Spinal cord layer 2 L4ipsiSCL2L4-0.5
Intermediolateral cell column L5ipsiIMLL5-0.5
Area X L5ipsiSCL10L5-0.5
Spinal cord layer 3 L5ipsiSCL3L5-0.5
Spinal cord layer 1 L5ipsiSCL1L5-0.5
Spinal cord layer 2 L5ipsiSCL2L5-0.5
Intermediolateral cell column L6ipsiIMLL6-0.5
Area X L6ipsiSCL10L6-0.5
Spinal cord layer 3 L6ipsiSCL3L6-0.5
Spinal cord layer 1 L6ipsiSCL1L6-0.5
Spinal cord layer 2 L6ipsiSCL2L6-0.5
Intermediolateral cell column S1ipsiIMLS1-0.5
Spinal cord layer 3 S1ipsiSCL3S1-0.5
Spinal cord layer 1 S1ipsiSCL1S1-0.5
Spinal cord layer 2 S1ipsiSCL2S1-0.5
Intermediolateral cell column S2ipsiIMLS2-0.5
Spinal cord layer 3 S2ipsiSCL3S2-0.5
Spinal cord layer 1 S2ipsiSCL1S2-0.5
Spinal cord layer 2 S2ipsiSCL2S2-0.5
Intermediolateral cell column S3ipsiIMLS3-0.5
Spinal cord layer 3 S3ipsiSCL3S3-0.5
Spinal cord layer 1 S3ipsiSCL1S3-0.5
Spinal cord layer 2 S3ipsiSCL2S3-0.5
Intermediolateral cell column S4ipsiIMLS4-0.5
Spinal cord layer 3 S4ipsiSCL3S4-0.5
Spinal cord layer 1 S4ipsiSCL1S4-0.5
Spinal cord layer 2 S4ipsiSCL2S4-0.5
Intermediolateral cell column Co1ipsiIMLCo1-0.5
Intermediolateral cell column Co2ipsiIMLCo2-0.5
Intermediolateral cell column Co3ipsiIMLCo3-0.5
Gigantocellular reticular nucleuscontraGi2
Raphe magnus nucleuscontraRMg-0.5
Raphe pallidus nucleuscontraRPa-0.5
Median eminencecontraME1
Colon descendingipsiOrgsColonD1
Ventral surface of the colon descendingipsiOrgsColonDV-10
Lateral surface of the colon descendingipsiOrgsColonDL-10

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG1
Locus coeruleusipsiLC-0.5
C1 adrenaline cellsipsiC13
C2 adrenaline cellsipsiC23
C3 adrenaline cellsipsiC33
Raphe magnus nucleusipsiRMg3
Medial preoptic nucleusipsiMPO1
Dorsomedial hypothalamic nucleusipsiDMHy2.5
Lateral hypothalamic areaipsiLH2
Subparaventricular zone ventrocaudal aspectipsiSuPZvc1
Area periventricularis hypothalamica communis [Regio hypothalamus medius]ipsiPeRHM-0.5
Dorsomedial hypothalamic nucleus [Periventricular zone]ipsiDMpz-0.5
Suprachiasmatic nucleusipsiSCh3
Suprachiasmatic nucleus dorsomedial quadrantipsiSCnDMq1
Region dorsal to suprachiasmatic nucleusipsiSChDT1
Medial lemniscusipsiml3
Spinal cordipsiMES-0.5
Locus coeruleuscontraLC-0.5
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]contraPaMP1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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