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Rat connectome



Medial terminal nucleus of the accessory optic tract right


Abbreviation
MT
Color       
Superior regionsAccessory optic system

SynonymsAbbr.Language
Accessory medial terminal of tract optic Eng
Medial terminal nucleus of the accessory optic tractMedialTermnacEng
Medial terminal nucleus of the accessory optic tractMTEng
Medial terminal nucleus  
Medial terminal nucleus of the accessory optic systemMTEng

SubregionsSide
Ventromedial part of the medial terminal nucleus of the accessory optic tractright
Ventral part of the medial terminal nucleus of the accessory optic tractright
Dorsal part of the medial terminal nucleus of the accessory optic tractright
Medial terminal nucleus of the accessory optic tract GABAergic cellsright

Output to

NameSideAbbr.WeightDetails
Nuclei of the lateral lemniscuscontraNLL0.5
Ventral nucleus of the lateral lemniscuscontraVLL1
Nucleus of DarkschewitschcontraDk1
Dorsal portion of the nucleus parabigeminalis pigmentosuscontraPBGd2
Lateral portion of the nucleus parabigeminalis pigmentosuscontraPBGL2
Superior colliculuscontraSC0
Central tegmental field dorsal partcontraTGACd1
Ventral tegmental area A10contraVTA-2
Laterodorsal tegmental nucleuscontraLDTg1
Ventral tegmental nucleuscontraVTg0.5
Dorsal tegmental nucleuscontraDTg0.5
Pedunculopontine tegmental nucleuscontraPPTg0.5
Visual tegmental relay zonecontraViTRZo3
Edinger Westphal nucleuscontraEW1
Interstitial nucleus of CajalcontraInC3
Cerebellar lobule 9contraCERL9-0.5
FlocculuscontraFl-0.5
Locus coeruleuscontraLC0.5
Pontine graycontraPG3
Pontine nuclei dorsolateral partcontraBPNdL1.5
Pontine nucleus medial partcontraBPNm1
Reticular systemcontraRF-2
Lateral parabrachial nucleuscontraLPB0.5
Parabrachial nucleus ventral partcontraPBV-0.5
Infratrigeminal nucleuscontrai5S1.5
Vestibular nucleicontraVnc-0.5
Superior vestibular nucleuscontraSuVe2
Lateral vestibular nucleuscontraLVe2
Inferior olivecontraIO3
Inferior olive dorsal nucleus rostral partcontraIODR3
Nucleus of the optic tractcontraOT-0.5
RetinacontraRET-0.5
Lateral terminal nucleus of the accessory optic tractcontraLTeN-0.5
Posterior commissurecontrapc-2
Medial longitudinal fasciculusipsimlf-2
Nuclei of the lateral lemniscusipsiNLL0.5
Nucleus of DarkschewitschipsiDk1
Oculomotor systemipsiOCS1
Oculomotor nucleusipsi33
Dorsal terminal nucleus of the accessory optic tractipsiDT3
Dorsal part of the dorsal terminal nucleus of the accessory optic tractipsiDDT-0.5
Periaqueductal grayipsiPAG-0.5
Ventral periaqueductal grayipsiVPAG1
Periventricular gray matteripsiPVG1.5
Superior colliculusipsiSC3
Superior colliculus superficial layersipsiSCs1
Optic nerve layer of the superior colliculusipsiOp1
Central tegmental field dorsal partipsiTGACd1
Substantia nigra compact partipsiSNC-0.5
Ventral tegmental area A10ipsiVTA-0.5
Laterodorsal tegmental nucleusipsiLDTg1
Ventral tegmental nucleusipsiVTg1
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg0.5
Visual tegmental relay zoneipsiViTRZo3
Edinger Westphal nucleusipsiEW3
Interstitial nucleus of CajalipsiInC3
Paraflocculus ventral partipsiPFlv-0.5
Cerebellar lobule 9ipsiCERL9-0.5
Cerebellar lobule 10ipsiCERL10-0.5
PonsipsiP-0.5
Locus coeruleusipsiLC1
Pontine grayipsiPG3
Reticulotegmental nucleus of the ponsipsiRtTg1
Pontine nuclei dorsolateral partipsiBPNdL1.5
Pontine nucleus medial partipsiBPNm1
Prepositus nucleusipsiPr-3
Mesencephalic reticular formationipsiMRF3
Deep mesencephalic nucleusipsiDpMe-0.5
Deep mesencephalic nucleus medial partipsiDpMeM3
Pontine reticular nucleusipsiPRN-2
Pontine reticular nucleus oral partipsiPnO2
Parabrachial nucleusipsiPB-0.5
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus ventral partipsiPBV-0.5
Subcoeruleus nucleusipsiSubC1.5
Infratrigeminal nucleusipsii5S1.5
Vestibular nucleiipsiVnc2
Superior vestibular nucleusipsiSuVe2
Medial vestibular nucleusipsiMVe0
Lateral vestibular nucleusipsiLVe2
Inferior oliveipsiIO3
Inferior olive dorsal nucleus rostral partipsiIODR3
Inferior olive beta subnucleusipsiIOBe1
Inferior olive ventrolateral protrusionipsiIOVL1
Olivary pretectal nucleusipsiOPT-0.5
Dorsal part of the lateral geniculate complexipsiLGd-3
Ventral part of the lateral geniculate complexipsiLGv0
Lateral posterior thalamic nucleusipsiLP-3
Zona incertaipsiZI-3
Nucleus of the optic tractipsiOT3
Rostral portion of the nucleus of the optic tractipsiOTR3
Central part of the nucleus of the optic tractipsiOTCe3
Ventral border of the nucleus of the optic tractipsiVBOT-0.5
Dorsal part of the nucleus of the optic tractipsiDOT-0.5
Nucleus of the optic tract GABAergic cellsipsiOTGABA-0.5
Superficial portion of the nucleus of the optic tractipsisOT3
Pretectal regionipsiPRT3
Anterior pretectal nucleusipsiAPT-0.5
Medial pretectal nucleusipsiMPT0
Posterior pretectal nucleusipsiPPT-3
Superior fasciculus of the accessory optic tractipsisfaopt-2
Medial lemniscusipsiml-2
Lateral terminal nucleus of the accessory optic tractipsiLTeN2
Interstitial nucleus of the superior fasciculus posterior fibersipsiinSFp1.5
Nucleus of the lateral olfactory tractipsiLOT-0.5
Anteromedial striatumipsiCPuam2
Dentate gyrusipsiDG-0.5
Anterior cingulate cortexipsiACC2
Posterior cingulate cortexipsiPCC1
Prefrontal cortexipsiPFC2
Medial prefrontal cortexipsimPFC0.5
Visual regionsipsiVR1
Nucleus of the posterior commissureipsiPCom0
Posterior commissureipsipc-2
Lateral geniculate complexipsiLG-2
Ventral lateral geniculate nucleusipsiVLG-3
Medial geniculate nucleusipsiMG3
Olfactory tubercleipsiTuO3

Input from

NameSideAbbr.WeightDetails
Interstitial nucleus of medial longitudinal fasciculuscontraIMLF-0.5
Dorsal terminal nucleus of the accessory optic tractcontraDT0
Intermediate interstitial nucleus of the medial longitudinal fasciculuscontraII0
Reticulotegmental nucleus of the ponscontraRtTg-0.5
Deep mesencephalic nucleuscontraDpMe-0.5
Pontine reticular nucleus oral partcontraPnO2
Pontine reticular nucleus caudal partcontraPNC1
Pontine raphe nucleuscontraPnR1
Nucleus of the optic tractcontraOT0
RetinacontraRET3
Superior temporal quadrant of the retina type 1 ganglion cellscontraRstqGC1-0.5
Superior temporal quadrant of the retina type 2 ganglion cellscontraRstqGC2-0.5
Lateral terminal nucleus of the accessory optic tractcontraLTeN-0.5
Dorsal terminal nucleus of the accessory optic tractipsiDT3
Periaqueductal grayipsiPAG-0.5
Midbrain extrapyramidal areaipsiMEA3
Substantia nigra A9ipsiSN0
Substantia nigra compact partipsiSNC0
Substantia nigra reticular partipsiSNR0
Ventral tegmental relay zoneipsiVTRZ0
Parabrachial pigmented nucleusipsiPBP0
Paranigral nucleusipsiPN0
Retrorubral nucleusipsiRR3
Laterodorsal tegmental nucleusipsiLDTg-0.5
Pedunculopontine tegmental nucleusipsiPPTg2
Visual tegmental relay zoneipsiViTRZo0
Intermediate interstitial nucleus of the medial longitudinal fasciculusipsiII1
Reticulotegmental nucleus of the ponsipsiRtTg-0.5
Deep mesencephalic nucleusipsiDpMe-0.5
Pontine reticular nucleus oral partipsiPnO2
Pontine reticular nucleus caudal partipsiPNC1
Parabrachial nucleusipsiPB3
Pontine raphe nucleusipsiPnR1
Olivary pretectal nucleusipsiOPT-1
Ventral part of the lateral geniculate complexipsiLGv-1
Lateral posterior thalamic nucleusipsiLP-1
Nucleus of the optic tractipsiOT3
Pretectal regionipsiPRT-0.5
Anterior pretectal nucleusipsiAPT-1
Posterior pretectal nucleusipsiPPT-1
RetinaipsiRET3
Infero temporal quadrant of the retinaipsiRETitq1.5
Retina ganglion cell layeripsiRETgcL-0.5
Retinal ganglion cellsipsiRETg-0.5
Central zone of the ganglion cell layer of the retinaipsiRETgcLcz3
Periphery zone of ganglion cell layer of the retinaipsiRETgcLpz2
Superior part of the retinaipsiRETS3
Retina inferior partipsiRETi2
Retina ventral partipsiRETV2
Lateral terminal nucleus of the accessory optic tractipsiLTeN-0.5
Ventral part of the medial terminal nucleus of the accessory optic tractipsiMTV0
Dorsal part of the medial terminal nucleus of the accessory optic tractipsiMTD0
Ventral lateral geniculate nucleusipsiVLG-0.5
Ventral geniculate nucleusipsiVG-0.5
Olfactory tubercleipsiTuO-1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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