| Name | Side | Abbr. | Weight | Details |
|---|
| Spinal trigeminal nucleus interpolar part | contra | Sp5I | -0.5 | |
| Basal forebrain | contra | BAF | 0.5 | |
| Medial preoptic nucleus | contra | MPO | -0.5 | |
| Lateral hypothalamic area | contra | LH | -0.5 | |
| Supraoptic nucleus dorsal part | contra | SOd | -0.5 | |
| Supraoptic nucleus ventral part [Supraoptic region] | contra | SOV | -0.5 | |
| Basolateral amygdaloid nucleus | contra | BL | 1 | |
| Precommissural nucleus | contra | PrC | 3 | |
| Rostral interstitial nucleus of medial longitudinal fasciculus | ipsi | RI | 0 | |
| Dorsolateral periaqueductal gray | ipsi | DLPAG | 1 | |
| Ventral periaqueductal gray | ipsi | VPAG | 2 | |
| Periventricular gray matter | ipsi | PVG | 1 | |
| Ventral tegmental area A10 | ipsi | VTA | 2 | |
| Dorsal tegmental nucleus | ipsi | DTg | 1 | |
| Gigantocellular reticular nucleus | ipsi | Gi | 1 | |
| Gigantocellular reticular nucleus ventral part | ipsi | GiV | 1 | |
| Dorsal raphe nucleus | ipsi | DR | 3 | |
| Median raphe nucleus | ipsi | MnR | 2 | |
| Pontine raphe nucleus | ipsi | PnR | 0 | |
| Raphe magnus nucleus | ipsi | RMg | 2 | |
| Raphe obscurus nucleus | ipsi | ROb | 1 | |
| Raphe pallidus nucleus | ipsi | RPa | 1 | |
| Nucleus interfascicularis hypoglossi | ipsi | NIFH | -0.5 | |
| Olivary nucleus | ipsi | ON | -0.5 | |
| Inferior olive | ipsi | IO | 4 | |
| Basal forebrain | ipsi | BAF | 0.5 | |
| Diagonal band of Broca | ipsi | DBB | 2 | |
| Nucleus of the horizontal limb of the diagonal band | ipsi | HDB | 3 | |
| Nucleus of the vertical limb of the diagonal band | ipsi | VDB | 3 | |
| Medial septal nucleus | ipsi | MS | 3 | |
| Substantia innominata anterior part | ipsi | SIA | 2 | |
| Substantia innominata posterior part | ipsi | SIP | 3 | |
| Magnocellular preoptic nucleus | ipsi | MCPO | 3 | |
| Medial preoptic nucleus | ipsi | MPO | 2 | |
| Lateral hypothalamic area | ipsi | LH | 1 | |
| Anterior hypothalamic nucleus | ipsi | AHn | 1 | |
| Dorsomedial hypothalamic nucleus [Medial zone] | ipsi | DM | 1.5 | |
| Posterior hypothalamic nucleus | ipsi | PH | 1 | |
| Medial basal hypothalamus | ipsi | MBH | 3 | |
| Ventromedial hypothalamic nucleus | ipsi | VMH | 0 | |
| Arcuate nucleus | ipsi | Arc | 0 | |
| Paraventricular hypothalamic nucleus lateral magnocellular part [Periventricular zone anterior region] | ipsi | PaLM | 1 | |
| Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region] | ipsi | PaMP | 1 | |
| Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region] | ipsi | PaAP | 1 | |
| Paraventricular nucleus of the hypothalamus magnocellular division medial magnocellular part | ipsi | PaAMm | 1 | |
| Paraventricular hypothalamic nucleus | ipsi | Pa | -0.5 | |
| Paraventricular hypothalamic nucleus magnocellular division between PaLM and PaAMm | ipsi | PaMagb | 1 | |
| Paraventricular hypothalamic nucleus parvocellular division posterior part | ipsi | PavPoP | 1 | |
| Paraventricular hypothalamic nucleus dorsomedial cap | ipsi | Padmc | 1 | |
| Ventral perinuclear paraventricular hypothalamic area | ipsi | PPaV | 1 | |
| Suprachiasmatic nucleus | ipsi | SCh | 2 | |
| Supraoptic nucleus dorsal part | ipsi | SOd | -0.5 | |
| Supraoptic nucleus ventral part [Supraoptic region] | ipsi | SOV | 1 | |
| Lateral mammillary nucleus | ipsi | LM | 0 | |
| Medial mammillary nucleus | ipsi | MMn | 0 | |
| Supramammillar nucleus lateral part | ipsi | SuML | 0 | |
| Supramammillar nucleus medial part | ipsi | SuMM | 0 | |
| Anterodorsal thalamic nucleus | ipsi | AD | 1 | |
| Anteromedial thalamic nucleus | ipsi | AM | 0 | |
| Anteroventral thalamic nucleus | ipsi | AV | 0 | |
| Central medial thalamic nucleus | ipsi | CM | -0.5 | |
| Midline in the central medial thalamic nucleus | ipsi | CMmi | -0.5 | |
| Centre median nucleus | ipsi | CeMe | 0 | |
| Centrolateral thalamic nucleus | ipsi | CL | 0 | |
| Paracentral thalamic nucleus | ipsi | PC | 0 | |
| Parafascicular thalamic nucleus | ipsi | PF | 1.5 | |
| Rhomboid thalamic nucleus | ipsi | Rh | 1.5 | |
| Mediodorsal thalamic nucleus | ipsi | MD | -0.5 | |
| Intermediodorsal thalamic nucleus | ipsi | IMD | -0.5 | |
| Mediodorsal thalamic nucleus lateral part | ipsi | MDL | 1.5 | |
| Mediodorsal thalamic nucleus medial part | ipsi | MDM | 0 | |
| Submedius thalamic nucleus | ipsi | Sub | 0 | |
| Paratenial thalamic nucleus | ipsi | PT | 0 | |
| Paraventricular thalamic nucleus | ipsi | PV | 1 | |
| Reuniens thalamic nucleus | ipsi | Re | 1 | |
| Subfascicular nucleus | ipsi | SFN | 1.5 | |
| Ventrolateral thalamic nucleus | ipsi | VL | 0 | |
| Ventrobasal complex | ipsi | VB | 0 | |
| Ventromedial thalamic nucleus | ipsi | VM | 0 | |
| Parafascicular centre-median complex | ipsi | PFCM | 1 | |
| Lateral posterior thalamic nucleus | ipsi | LP | 0 | |
| Laterodorsal thalamic nucleus | ipsi | LD | 0 | |
| Posteromedial thalamic nucleus | ipsi | PMTN | 1 | |
| Reticular thalamic nucleus | ipsi | Rt | 0 | |
| Subparafascicular thalamic nucleus | ipsi | SPF | 0 | |
| Zona incerta | ipsi | ZI | 3 | |
| Forel field H1 | ipsi | FFH1 | 0 | |
| Forel field H2 | ipsi | FFH2 | 0 | |
| Lateral habenular nucleus | ipsi | LHb | -0.5 | |
| Medial habenular nucleus | ipsi | MHb | 0 | |
| Pretectal region | ipsi | PRT | 1.5 | |
| Basolateral amygdaloid nucleus | ipsi | BL | 1 | |
| Lateral amygdaloid nucleus | ipsi | LA | -0.5 | |
| Bed nucleus of the stria terminalis | ipsi | BST | 0.5 | |
| Bed nucleus of the stria terminalis intraamygdaloid division | ipsi | BSTIA | 2.5 | |
| Bed nucleus of the stria terminalis lateral division ventral part | ipsi | BSTLV | -0.5 | |
| Central amygdaloid nucleus | ipsi | Ce | 0.5 | |
| Central amygdaloid nucleus ventral part | ipsi | CeV | -0.5 | |
| Interstitial nucleus of the posterior limb of the anterior commissure | ipsi | IPAC | 0.5 | |
| Sublenticular extended amygdala | ipsi | SLEA | 2 | |
| Medial amygdaloid nucleus | ipsi | Me | -0.5 | |
| Globus pallidus | ipsi | GP | 1 | |
| Accumbens nucleus shell | ipsi | AcbSh | 0.5 | |
| Subthalamic nucleus | ipsi | STh | 1 | |
| Nucleus of the posterior commissure | ipsi | PCom | 1 | |
| Dorsal geniculate nucleus lateral part | ipsi | DLGl | 0 | |
| Intergeniculate leaf | ipsi | IGL | 0 | |
| Ventral lateral geniculate nucleus | ipsi | VLG | 0 | |
| Medial geniculate nucleus | ipsi | MG | 0 | |
| Olfactory bulb A16 | ipsi | MOB | 3 | |
| Septal region | ipsi | SER | -0.5 | |
| Lateral septal nucleus rostral part | ipsi | LSr | 1 | |
| Caudal septum | ipsi | CSER | -0.5 | |
| Thoracal segment 1 | ipsi | T1 | 3 | |
| Thoracal segment 2 | ipsi | T2 | 3 | |
| Intermediolateral cell column T2 | ipsi | IMLT2 | -0.5 | |
| Thoracal segment 3 | ipsi | T3 | 3 | |
| Intermediolateral cell column T3 | ipsi | IMLT3 | -0.5 | |
| Thoracal segment 4 | ipsi | T4 | 3 | |
| Intermediolateral cell column T7 | ipsi | IMLT7 | -0.5 | |
| Intermediolateral cell column T8 | ipsi | IMLT8 | -0.5 | |
| Intermediolateral cell column T9 | ipsi | IMLT9 | -0.5 | |
| Intermediolateral cell column T11 | ipsi | IMLT11 | -0.5 | |
| Intermediolateral cell column T12 | ipsi | IMLT12 | -0.5 | |
| Intermediolateral cell column T13 | ipsi | IMLT13 | -0.5 | |
| Intermediolateral cell column L1 | ipsi | IMLL1 | -0.5 | |
| Submandibular gland | contra | OrgsSubg | -10 | |
| Submandibular gland | ipsi | OrgsSubg | -10 | |
| Posterior cricoarytenoid muscle | ipsi | MuscPCA | -0.5 | |
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