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Rat connectome



Dorsal horn L1 right


Abbreviation
DHL1
Color       
Superior regionsSpinal cord layers L1

SynonymsAbbr.Language
Dorsal horn L1DHL1Eng

SubregionsSide
Deep dorsal horn L1right
Nucleus proprius L1right
Superficial dorsal horn L1right
Reticular part of neck of dorsal horn L1right
Medial part of neck of dorsal horn L1right

Output to

NameSideAbbr.WeightDetails
Central graycontraCG-0.5
Nuclei of the lateral lemniscuscontraNLL1
Inferior colliculuscontraICOL3
Superior colliculuscontraSC3
Tegmental areacontraTGA-0.5
Central tegmental field dorsal partcontraTGACd0
Laterodorsal tegmental nucleuscontraLDTg1
Ventral tegmental nucleuscontraVTg0.5
Dorsal tegmental nucleuscontraDTg0.5
Pedunculopontine tegmental nucleuscontraPPTg1
Deep cerebellar nucleicontraDNC1
Locus coeruleuscontraLC0.5
Mesencephalic reticular formationcontraMRF3
Cuneiforme nucleuscontraCnF-0.5
Koelliker Fuse nucleuscontraKF2
Lateral parabrachial nucleuscontraLPB0.5
Lateral reticular nucleuscontraLRt3
Caudal part to the midportion of the lateral reticular nucleuscontraCaLRtMp-0.5
Caudal third of the caudomedial part of the lateral reticular nucleuscontraLRtcmCt0
Lateral reticular nucleus magnocellular partcontraLRtMC1
Lateral reticular nucleus parvicellular partcontraLRtPC3
Lateral reticular nucleus subtrigeminal partcontraLRtS51
Nucleus of the solitary tractcontraSol3
Caudal ventrolateral medullacontraCVLM1
Rostral ventrolateral medullacontraRVLM-0.5
A1 noradrenergic cellscontraA13
A2 noradrenergic cellscontraA22
GracilecontraGra-0.5
Inferior olivecontraIO2
HypothalamuscontraHYPO-0.5
ThalamuscontraT3
Lateral group of the dorsal thalamuscontraLAT3
Posterior thalamic nuclear groupcontraPo2
Submedius thalamic nucleuscontraSub3
Ventral posterolateral thalamic nucleuscontraVPL2
Ventrobasal complex anterior partcontraVBa3
Medial thalamic zonecontraMTZ2
Posterior groupcontraPTG1
Central amygdaloid nucleuscontraCe1.5
Thoracal segment 10contraT101
Thoracal segment 12contraT121
Lumbar segment 3contraL31
Lumbar segment 5contraL51
Central grayipsiCG1
Nuclei of the lateral lemniscusipsiNLL1
Prerubral fieldipsiPR-3
Inferior colliculusipsiICOL1
Superior colliculusipsiSC1
Central tegmental field dorsal partipsiTGACd0
Laterodorsal tegmental nucleusipsiLDTg1
Ventral tegmental nucleusipsiVTg1
Dorsal tegmental nucleusipsiDTg0.5
Pedunculopontine tegmental nucleusipsiPPTg1
Deep cerebellar nucleiipsiDNC2
Locus coeruleusipsiLC1
Locus coeruleus rostral partipsiLCRo-0.5
Mesencephalic reticular formationipsiMRF1
Cuneiforme nucleusipsiCnF0.5
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleusipsiLPB1
Lateral parabrachial nucleus central partipsiLPBC-0.5
Lateral parabrachial nucleus dorsal partipsiLPBD-0.5
Lateral parabrachial nucleus external partipsiLPBE-0.5
Lateral parabrachial nucleus rostral partipsiLPBr-0.5
Parabrachial nucleus medialipsiPBnMe0.5
Gigantocellular reticular nucleusipsiGi-0.5
Gigantocellular reticular nucleus alpha partipsiGiA-0.5
Lateral reticular nucleusipsiLRt1
Caudal part to the midportion of the lateral reticular nucleusipsiCaLRtMp0
Caudal third of the caudomedial part of the lateral reticular nucleusipsiLRtcmCt0
Lateral reticular nucleus magnocellular partipsiLRtMC1
Lateral reticular nucleus parvicellular partipsiLRtPC2
Lateral reticular nucleus subtrigeminal partipsiLRtS50
Nucleus of the solitary tractipsiSol1
Caudal ventrolateral medullaipsiCVLM1
Rostral ventrolateral medullaipsiRVLM-0.5
A1 noradrenergic cellsipsiA11
A2 noradrenergic cellsipsiA20.5
Dorsal column nucleiipsiDCN-0.5
Cuneate nucleusipsiCu-0.5
GracileipsiGra-0.5
Gracile nucleus principal partipsiGr2
Inferior oliveipsiIO0.5
Paragigantocellular reticular nucleusipsiPGi-0.5
HypothalamusipsiHYPO-0.5
Lateral hypothalamic areaipsiLH-0.5
Posterior hypothalamic areaipsiPHA-0.5
Paraventricular hypothalamic nucleusipsiPa0.5
Anteromedial thalamic nucleusipsiAM-3
Paracentral thalamic nucleusipsiPC-3
Rhomboid thalamic nucleusipsiRh-3
Lateral group of the dorsal thalamusipsiLAT1
Posterior thalamic nuclear groupipsiPo1
Submedius thalamic nucleusipsiSub2.5
Reuniens thalamic nucleusipsiRe-3
Reuniens thalamic nucleus ventral partipsiReV-3
Ventrolateral thalamic nucleusipsiVL-3
Ventrobasal complexipsiVB-3
Ventral posterolateral thalamic nucleusipsiVPL1
Ventrobasal complex anterior partipsiVBa0.5
Ventromedial thalamic nucleusipsiVM-3
Medial thalamic zoneipsiMTZ1
Posterior groupipsiPTG0.5
Ventral medial nucleus of the thalamusipsiVMT-3
Zona incertaipsiZI-0.5
Lateral funiculusipsilf-2
TelencephalonipsiTEL-0.5
Amygdaloid complexipsiAC-0.5
Central amygdaloid nucleusipsiCe0.5
Central amygdaloid nucleus anterior partipsiCeAn-0.5
Basal gangliaipsiBG-0.5
Infralimbic cortexipsiIL-0.5
Medial orbital cortexipsiMO-0.5
Ventrolateral funiculusipsivLF-2
Cervical enlargement dorsal hornipsiCSegEd-0.5
ColonipsiOrgsColonS0.5
Lumbar epaxial musclescontraMuscLep2
Lumbar epaxial musclesipsiMuscLep3
Bulbospongiosus muscleipsiMuscbsp-10
ProstateipsiOrgProst-10
Seminal vesicleipsiOrgRepSV-10
Trigone of the urinary bladderipsiOrgUrBLaT-10

Input from

NameSideAbbr.WeightDetails
Paralemniscal nucleuscontraPL-0.5
Periaqueductal graycontraPAG0
Dorsolateral periaqueductal gray caudal partcontraPAGdlc0
Ventrolateral periaqueductal gray caudal partcontraPAGvlc0.5
Ventrolateral periaqueductal gray rostral partcontraPAGvlr0.5
Ventrolateral tegmental areacontraVLTg3
Pedunculopontine tegmental nucleuscontraPPTg1
A5 noradrenaline cellscontraA50.5
A7 noradrenaline cellscontraA70.5
Locus coeruleuscontraLC1
Koelliker Fuse nucleuscontraKF3
Lateral parabrachial nucleus crescent partcontraLPBCr1
Lateral parabrachial nucleus dorsal partcontraLPBD0.5
Lateral parabrachial nucleus external partcontraLPBE0.5
Lateral parabrachial nucleus ventral partcontraLPBV0.5
Caudal portion of the parabrachial nucleus central lateral partcontraPBCeLC0.5
Rostral portion of the parabrachial nucleus central lateral partcontraPBCeLR0.5
Parabrachial nucleus medialcontraPBnMe2
Medial parabrachial nucleus external partcontraMPBE0.5
Gigantocellular reticular nucleuscontraGi1
Subcoeruleus nucleuscontraSubC0.5
Lateral paragigantocellular nucleuscontraLPGi1
Rostral part of the ventromedial medulla oblongatacontraRMeObvm3
A11 dopamine cellscontraA110.5
Parafascicular thalamic nucleus prerubral partcontraPFPR0.5
Periaqueductal grayipsiPAG0.5
Dorsolateral periaqueductal gray caudal partipsiPAGdlc0
Ventrolateral periaqueductal gray caudal partipsiPAGvlc0
Ventrolateral periaqueductal gray rostral partipsiPAGvlr0
Red nucleus ventrolateral partipsiRveL2
Ventrolateral tegmental areaipsiVLTg2
Pedunculopontine tegmental nucleusipsiPPTg1
A5 noradrenaline cellsipsiA51
A7 noradrenaline cellsipsiA71
Locus coeruleusipsiLC2
Koelliker Fuse nucleusipsiKF3
Lateral parabrachial nucleus crescent partipsiLPBCr1
Lateral parabrachial nucleus dorsal partipsiLPBD0.5
Lateral parabrachial nucleus external partipsiLPBE0.5
Lateral parabrachial nucleus ventral partipsiLPBV0.5
Caudal portion of the parabrachial nucleus central lateral partipsiPBCeLC0.5
Rostral portion of the parabrachial nucleus central lateral partipsiPBCeLR0.5
Parabrachial nucleus dorsal partipsiPBD-0.5
Parabrachial nucleus medialipsiPBnMe0.5
Medial parabrachial nucleus external partipsiMPBE0.5
Gigantocellular reticular nucleusipsiGi2
Gigantocellular reticular nucleus alpha partipsiGiA1
Subcoeruleus nucleusipsiSubC1
Raphe magnus nucleusipsiRMg3
Raphe obscurus nucleusipsiROb1
Raphe pallidus nucleusipsiRPa1
Paragigantocellular reticular nucleusipsiPGi1
Lateral paragigantocellular nucleusipsiLPGi2
Rostral ventral medulla oblongataipsiRVMeO3
Rostral part of the ventromedial medulla oblongataipsiRMeObvm3
Lateral hypothalamic areaipsiLH1
A11 dopamine cellsipsiA111
Parafascicular thalamic nucleus prerubral partipsiPFPR1
Dorsal root ganglion T11ipsiDRGT11-0.5
Dorsal root ganglion T12ipsiDRGT12-0.5
Saphenous nerveipsispn-0.5
Sciatic nerveipsisci-0.5
Parietal peritoneumipsiOrgPeriP-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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