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Rat connectome
Reuniens thalamic nucleus rostrolateral division left
Abbreviation
Rerl
Color
Superior regions
Nucleus reuniens rostral division
Synonyms
Abbr.
Language
Reuniens thalamic nucleus rostrolateral division
Rerl
Eng
RERl
Input from
Name
Side
Abbr.
Weight
Details
Central gray mesencephalic part
ipsi
CGM
3
Central gray pons part
ipsi
CGP
1
Superior colliculus
ipsi
SC
2
Substantia nigra compact part
ipsi
SNC
1
Ventral tegmental area A10
ipsi
VTA
1
Peripeduncular nucleus
ipsi
PP
1
Retrorubral nucleus
ipsi
RR
1
Laterodorsal tegmental nucleus
ipsi
LDTg
2
Pedunculopontine tegmental nucleus
ipsi
PPTg
2
Barringtons nucleus
ipsi
Bar
-3
Locus coeruleus
ipsi
LC
1
Nucleus incertus
ipsi
NI
1
Pons caudal part
ipsi
Pca
1
Pons oral part
ipsi
Por
1
Magnocellular reticular nucleus
ipsi
NRMC
1
Mesencephalic reticular formation
ipsi
MRF
1
Cuneiforme nucleus
ipsi
CnF
1
Parabrachial nucleus
ipsi
PB
3
Koelliker Fuse nucleus
ipsi
KF
1
Gigantocellular reticular nucleus
ipsi
Gi
1
Nucleus of the solitary tract
ipsi
Sol
1
Nucleus of the solitary tract commissural part
ipsi
SolC
2
Dorsal raphe nucleus
ipsi
DR
2
Dorsal raphe nucleus caudal part
ipsi
DRC
1
Median raphe nucleus
ipsi
MnR
2
Central raphe nucleus
ipsi
CRN
1
Raphe magnus nucleus
ipsi
RMg
1
Diagonal band of Broca
ipsi
DBB
2
Medial septal nucleus
ipsi
MS
1
Substantia innominata
ipsi
SI
2
Lateral preoptic area
ipsi
LPO
2
Medial preoptic area
ipsi
MPA
3
Anterodorsal preoptic nucleus
ipsi
ADP
2
Magnocellular preoptic nucleus
ipsi
MCPO
2
Medial preoptic nucleus
ipsi
MPO
3
Dorsal tenia tecta
ipsi
DTT
2
Lateral hypothalamic area
ipsi
LH
3
Anterior hypothalamic area
ipsi
AHA
3
Anterior hypothalamic area posterior part
ipsi
AHAP
3
Anterior hypothalamic nucleus
ipsi
AHn
2
Anteroventral preoptic nucleus
ipsi
AnV
1
Dorsomedial hypothalamic nucleus [Medial zone]
ipsi
DM
2
Posterior hypothalamic area
ipsi
PHA
3
Ventromedial hypothalamic nucleus
ipsi
VMH
1
Paraventricular hypothalamic nucleus
ipsi
Pa
1
Lateral mammillary nucleus
ipsi
LM
2
Medial mammillary nucleus
ipsi
MMn
2
Premammillary nucleus dorsal part
ipsi
PMD
3
Premammillary nucleus ventral part
ipsi
PMV
1
Supramammillar nucleus
ipsi
SuM
3
Subfornical organ
ipsi
SFO
2
Laterodorsal thalamic nucleus
ipsi
LD
1
Zona incerta
ipsi
ZI
3
Lateral habenular nucleus
ipsi
LHb
1
Anterior pretectal nucleus
ipsi
APT
2
Medial pretectal nucleus
ipsi
MPT
3
Posterior pretectal nucleus
ipsi
PPT
2
Basomedial amygdaloid nucleus
ipsi
BM
2
Bed nucleus of the stria terminalis
ipsi
BST
2
Amygdalopiriform transition area
ipsi
APir
-3
Cortical amygdaloid nucleus
ipsi
CAn
2
Medial amygdaloid nucleus
ipsi
Me
3
Claustrum
ipsi
Cl
3
Ammon horn
ipsi
AmH
1
Subiculum dorsal part
ipsi
Sd
2
Subiculum ventral part
ipsi
Sv
2
Presubiculum
ipsi
PrS
2
Postsubiculum
ipsi
Post
1
Entorhinal cortex
ipsi
Ent
1
Retrosplenial agranular cortex
ipsi
RSA
1
Retrosplenial granular cortex subdivisions
ipsi
RSGsu
2
Cingulate cortex area 1
ipsi
Cg1
2
Cingulate cortex area 1 caudal part
ipsi
Cg1c
2
Cingulate cortex area 2
ipsi
Cg2
2
Cingulate cortex area 2 caudal part
ipsi
Cg2c
2
Prelimbic cortex
ipsi
PrL
3
Infralimbic cortex
ipsi
IL
3
Agranular insular cortex dorsal part
ipsi
AID
2
Agranular insular cortex posterior part
ipsi
AIP
1
Agranular insular cortex ventral part
ipsi
AIV
1
Perirhinal cortex
ipsi
A35
1
Medial agranular prefrontal cortex
ipsi
AGm
2
Secondary somatosensory cortex
ipsi
S2
1
Visual regions
ipsi
VR
1
Medial orbital cortex
ipsi
MO
3
Precommissural nucleus
ipsi
PrC
2
Intergeniculate leaf
ipsi
IGL
2
Ventral lateral geniculate nucleus
ipsi
VLG
2
Lateral septal nucleus
ipsi
LS
3
Septofimbrial nucleus
ipsi
SFi
2
Anterior hypothalamic nucleus
contra
AHn
2.5
Dorsomedial hypothalamic nucleus [Medial zone]
contra
DM
2
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
Homepage
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Staff
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neuroVIISAS
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Rat connectome
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Other connectomes
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Neuroimaging
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Links
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Publications