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Rat connectome



Ventromedial thalamic nucleus caudal two thirds left


Abbreviation
VMctt
Color       
Superior regionsVentromedial thalamic nucleus caudal part

SynonymsAbbr.Language
Ventromedial thalamic nucleus caudal two thirdsVMcttEng

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
Superior colliculusipsiSC-0.5
Tegmental areaipsiTGA-0.5
Substantia nigra reticular partipsiSNR1
Substantia nigra reticular part dorsal tieripsiSNRD1
Rostral tegmental areaipsirTGA1
Medulla oblongataipsiMeOb-0.5
Anterior group of the dorsal thalamusipsiATN-2
Reticular thalamic nucleusipsiRt-2
Reticular thalamic nucleus ventromedial partipsiRtvm3
Nucleus of the fields of ForelipsiF3
Internal capsuleipsiic-2
Corpus callosumipsicc-0.5
Forceps minor of the corpus callosumipsifmi-2
Genu of the corpus callosumipsigcc-0.5
Dorsal bank of rhinal fissureipsiDBrf-0.5
Globus pallidusipsiGP-0.5
Caudate putamenipsiCPu-0.5
Retrosplenial granular cortex caudal part layer 6 deep partipsiRSGc6d-0.5
Limbic regionsipsiLR0
Cingulate cortexipsiCg2
Cingulate cortex area 2 deep half of layer 6ipsiCg2dhL6-0.5
Frontal association cortexipsiFrA4
Dorsal part of frontal association cortex layer 3ipsiFrADL32
Dorsal part of frontal association cortex layer 5ipsiFrADL50.5
Frontal association cortex dorsal partipsiFrAd-0.5
Frontal association cortex lateral aspectipsiFrALA-0.5
Frontal association cortex layer 3ipsiFrALL32
Frontal association cortex layer 5ipsiFrALL50.5
Frontal cortex area 1 layer 1ipsiFr1L13
Frontal cortex area 1 layer 1 outer quarteripsiFr1L1oq-0.5
Temporal association area 3ipsiTe30
Auditory regionsipsiAU-0.5
Perirhinal cortexipsiA353
Perirhinal cortex layer 3ipsiA35L33
Ectorhinal cortexipsiA363
Ectorhinal cortex layer 3ipsiA36L33
Motoric regionsipsiM4
Sensory regionsipsiSR2
Primary visual cortexipsiV11
Ventrolateral orbital areaipsiVLO0
Spinal cordipsiMES-0.5

Input from

NameSideAbbr.WeightDetails
Central gray lateral ventral partipsiCGVD1
Superior colliculusipsiSC-0.5
Superior colliculus lateral part deep layersipsiSCdL-0.5
Superior colliculus lateral part intermediate layeripsiSCLayi-0.5
Substantia nigra A9ipsiSN2
Substantia nigra reticular partipsiSNR-0.5
Ventral tegmental area A10ipsiVTA-0.5
Cerebellar hemisphereipsiCEREBH0.5
Cerebellar nucleiipsiDCeN2
Lateral cerebellar nucleusipsiCERL0.5
Reticular systemipsiRF-0.5
Peribrachial regionipsiPBR1
Parabrachial nucleusipsiPB2
Dorsal raphe nucleusipsiDR1
Endopiriform systemipsiEnN0.5
Substantia innominataipsiSI0.5
HypothalamusipsiHYPO2
Midline group of the dorsal thalamus posterior partipsiMTNp-0.5
Reticular thalamic nucleusipsiRt4
Zona incertaipsiZI2
Lateral habenular nucleusipsiLHb-0.5
Amygdaloid complexipsiAC0.5
Basal nucleusipsiBnc0.5
Anterior amygdaloid areaipsiAA0.5
Cortical amygdaloid nucleusipsiCAn0.5
Dorsal part of claustrumipsiDCl-0.5
Ventral pallidumipsiVP-0.5
Cerebral cortexipsiCEC2
Frontal association cortexipsiFrA4
Frontal association cortex dorsal partipsiFrAd-0.5
Frontal association cortex layer 5ipsiFrALL50.5
Frontal association cortex layer 6ipsiFrALL62.5
Frontal association cortex medial partipsiFrAM-0.5
Frontal association cortex sulcal wallsipsiFrAsu-0.5
Central gray lateral ventral partcontraCGVD1
Anterior interposed nucleuscontraAIN2
Lateral cerebellar nucleuscontraCERL3
Medial cerebellar nucleuscontraMed2
Reticular systemcontraRF-0.5
Peribrachial regioncontraPBR1
Parabrachial nucleuscontraPB1
Medullary reticular nucleuscontraMdD-0.5
Dorsal raphe nucleuscontraDR1
Reticular thalamic nucleuscontraRt1
Reticular thalamic nucleus homologous sectorcontraRthLs1
Lateral habenular nucleuscontraLHb-0.5
Cerebral cortexcontraCEC0.5
Medial sulcal areacontraMeSA0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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