University of Rostock

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Rat connectome



Dorsal horn C7 left


Abbreviation
DHC7
Color       
Superior regionsSpinal cord layers C7

SynonymsAbbr.Language
Dorsal horn C7DHC7Eng

SubregionsSide
Base of dorsal horn C7left
Deep dorsal horn C7left
Intermediate zone of dorsal horn C7left
Neck of dorsal horn C7left
Nucleus proprius C7left
Superficial dorsal horn C7left

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG1
Nuclei of the lateral lemniscusipsiNLL1
Prerubral fieldipsiPR-3
Inferior colliculusipsiICOL1
Superior colliculusipsiSC1
Central tegmental field dorsal partipsiTGACd0
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleusipsiDTg0
Pedunculopontine tegmental nucleusipsiPPTg1.5
Mesencephalic reticular formationipsiMRF1
Lateral parabrachial nucleusipsiLPB1
Lateral parabrachial nucleus central partipsiLPBC-0.5
Lateral parabrachial nucleus external partipsiLPBE-0.5
Gigantocellular reticular nucleusipsiGi3
Lateral reticular nucleusipsiLRt1
Lateral reticular nucleus magnocellular partipsiLRtMC1
Lateral reticular nucleus parvicellular partipsiLRtPC1
Lateral reticular nucleus subtrigeminal partipsiLRtS50
Nucleus of the solitary tractipsiSol1
Caudal ventrolateral medullaipsiCVLM1
A1 noradrenergic cellsipsiA11
A2 noradrenergic cellsipsiA20.5
Cuneate nucleusipsiCu4
Retrotrapezoid nucleusipsiRTN1
HypothalamusipsiHYPO-0.5
Lateral hypothalamic areaipsiLH-0.5
Posterior hypothalamic areaipsiPHA-0.5
Paraventricular hypothalamic nucleusipsiPa0.5
Anteromedial thalamic nucleusipsiAM-3
Paracentral thalamic nucleusipsiPC-3
Rhomboid thalamic nucleusipsiRh-3
Submedius thalamic nucleusipsiSub2.5
Reuniens thalamic nucleusipsiRe-3
Reuniens thalamic nucleus ventral partipsiReV-3
Ventrolateral thalamic nucleusipsiVL-3
Ventrobasal complexipsiVB-3
Ventromedial thalamic nucleusipsiVM-3
Posterior groupipsiPTG0.5
Ventral medial nucleus of the thalamusipsiVMT-3
Zona incertaipsiZI-0.5
Lateral funiculusipsilf-2
TelencephalonipsiTEL-0.5
Amygdaloid complexipsiAC-0.5
Central amygdaloid nucleusipsiCe0.5
Central amygdaloid nucleus anterior partipsiCeAn-0.5
Basal gangliaipsiBG-0.5
Infralimbic cortexipsiIL-0.5
Medial orbital cortexipsiMO-0.5
Ventrolateral funiculusipsivLF-2
Central graycontraCG-0.5
Nuclei of the lateral lemniscuscontraNLL1
Inferior colliculuscontraICOL3
Superior colliculuscontraSC3
Tegmental areacontraTGA-0.5
Central tegmental field dorsal partcontraTGACd0
Laterodorsal tegmental nucleuscontraLDTg1
Dorsal tegmental nucleuscontraDTg0
Pedunculopontine tegmental nucleuscontraPPTg1
Mesencephalic reticular formationcontraMRF3
Cuneiforme nucleuscontraCnF-0.5
Lateral parabrachial nucleuscontraLPB0.5
Lateral reticular nucleuscontraLRt3
Lateral reticular nucleus magnocellular partcontraLRtMC2
Lateral reticular nucleus parvicellular partcontraLRtPC1
Lateral reticular nucleus subtrigeminal partcontraLRtS50
Nucleus of the solitary tractcontraSol3
Caudal ventrolateral medullacontraCVLM1
A1 noradrenergic cellscontraA13
A2 noradrenergic cellscontraA22
Retrotrapezoid nucleuscontraRTN0.5
HypothalamuscontraHYPO-0.5
Submedius thalamic nucleuscontraSub3
Posterior groupcontraPTG3
Central amygdaloid nucleuscontraCe1.5
Orbital cortexcontraOrC0.5

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG0
Dorsolateral periaqueductal gray caudal partipsiPAGdlc0
Ventrolateral periaqueductal gray caudal partipsiPAGvlc0
Ventrolateral periaqueductal gray rostral partipsiPAGvlr0
Red nucleusipsiR-0.5
Dorsomedial portion of the red nucleus caudal partipsiRnCaDm-0.5
Red nucleus dorsomedial partipsiRdm3
Red nucleus rostral partipsiRnRo-0.5
Red nucleus ventrolateral partipsiRveL-0.5
Ventrolateral tegmental areaipsiVLTg3
Pedunculopontine tegmental nucleusipsiPPTg1
A5 noradrenaline cellsipsiA53
A7 noradrenaline cellsipsiA73
Locus coeruleusipsiLC2
Mesencephalic reticular formationipsiMRF0.5
Deep mesencephalic nucleus medial partipsiDpMeM-0.5
Koelliker Fuse nucleusipsiKF3
Lateral parabrachial nucleus crescent partipsiLPBCr1
Lateral parabrachial nucleus dorsal partipsiLPBD0.5
Lateral parabrachial nucleus external partipsiLPBE0.5
Lateral parabrachial nucleus ventral partipsiLPBV0.5
Caudal portion of the parabrachial nucleus central lateral partipsiPBCeLC1
Rostral portion of the parabrachial nucleus central lateral partipsiPBCeLR1
Parabrachial nucleus dorsal partipsiPBD-0.5
Parabrachial nucleus medialipsiPBnMe2
Medial parabrachial nucleus external partipsiMPBE0.5
Gigantocellular reticular nucleusipsiGi2
Gigantocellular reticular nucleus alpha partipsiGiA2
Subnucleus reticularis dorsalisipsiSRD-0.5
Subcoeruleus nucleusipsiSubC3
Mesencephalic trigeminal nucleusipsiMe5-0.5
Medial vestibular nucleus caudal partipsiMVeP-0.5
Medial vestibular nucleus rostral partipsiMVeR-0.5
Lateral vestibular nucleusipsiLVe3
Nucleus of the solitary tract commissural partipsiSolC-0.5
Raphe nucleiipsiRAN3
Raphe magnus nucleusipsiRMg4
Raphe obscurus nucleusipsiROb3
Raphe pallidus nucleusipsiRPa3
Cuneate nucleusipsiCu-0.5
Lateral paragigantocellular nucleusipsiLPGi2
Rostral ventral medulla oblongataipsiRVMeO3
Lateral hypothalamic areaipsiLH1
A11 dopamine cellsipsiA111
Parafascicular thalamic nucleus prerubral partipsiPFPR1
Dorsal root ganglion C4ipsiDRGC4-0.5
Dorsal root ganglion C5ipsiDRGC5-0.5
Paralemniscal nucleuscontraPL-0.5
Periaqueductal graycontraPAG0
Dorsolateral periaqueductal gray caudal partcontraPAGdlc0
Ventrolateral periaqueductal gray caudal partcontraPAGvlc0.5
Ventrolateral periaqueductal gray rostral partcontraPAGvlr0.5
Red nucleuscontraR3
Pedunculopontine tegmental nucleuscontraPPTg1
A5 noradrenaline cellscontraA52
A7 noradrenaline cellscontraA72
Locus coeruleuscontraLC1
Mesencephalic reticular formationcontraMRF0.5
Koelliker Fuse nucleuscontraKF4
Lateral parabrachial nucleus crescent partcontraLPBCr1
Lateral parabrachial nucleus dorsal partcontraLPBD0.5
Lateral parabrachial nucleus external partcontraLPBE0.5
Lateral parabrachial nucleus ventral partcontraLPBV0.5
Caudal portion of the parabrachial nucleus central lateral partcontraPBCeLC0.5
Rostral portion of the parabrachial nucleus central lateral partcontraPBCeLR0.5
Parabrachial nucleus medialcontraPBnMe2
Medial parabrachial nucleus external partcontraMPBE0.5
Gigantocellular reticular nucleuscontraGi1
Gigantocellular reticular nucleus alpha partcontraGiA0.5
Subcoeruleus nucleuscontraSubC2
Trigeminal ganglioncontra5Gn3
Mandibular region of the trigeminal ganglion at the level of the entry of the mandibular nervecontra5GnMaEm3
Caudal area of the ophthalmomaxillary region of the trigeminal ganglioncontra5GnCOM3
Rostral area of the ophthalmomaxillary region of the trigeminal ganglioncontra5GnROM3
Superficial part of the trigeminal ganglioncontra5GnS3
Medial vestibular nucleus caudal partcontraMVeP-0.5
Medial vestibular nucleus rostral partcontraMVeR-0.5
Lateral vestibular nucleuscontraLVe2
Raphe nucleicontraRAN3
Raphe magnus nucleuscontraRMg4
Lateral paragigantocellular nucleuscontraLPGi1
A11 dopamine cellscontraA110.5
Parafascicular thalamic nucleus prerubral partcontraPFPR0.5
Dorsal root ganglion C3contraDRGC31

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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