University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Periamygdaloid complex left


Abbreviation
PAC
Color       
Superior regionsOlfactory amygdala

SynonymsAbbr.Language
Periamygdaloid cortex Eng
Periamygdaloid complexPACEng
Periamygdaloid cortex periamygdaloid subfield Eng
Periamygdaloid subfield Eng
Periamygdaloid cortexPACEng

SubregionsSide
Caudal periamygdaloid nucleusleft
Periamygdaloid complex dorsomedial partleft
Periamygdaloid complex layersleft
Periamygdaloid complex medial divisionleft
Periamygdaloid complex sulcal divisionleft
Periamygdaloid cortex lateral partleft
Periamygdaloid complex posteromedial partleft

Output to

NameSideAbbr.WeightDetails
Parabrachial pigmented nucleusipsiPBP0
Endopiriform systemipsiEnN-1
Central endopiriform systemipsiCEnN1
Dorsal endopiriform nucleusipsiDEn-1
Ventral endopiriform nucleusipsiVEn1
Islands of CallejaipsiICj-0.5
Tenia tectaipsiTT3
Lateral hypothalamic areaipsiLH2
Supraoptic nucleus [Supraoptic region]ipsiSO-2
Mediodorsal thalamic nucleusipsiMD2
Mediodorsal thalamic nucleus central partipsiMDC1
Mediodorsal thalamic nucleus medial partipsiMDM1
Amygdaloid complexipsiAC-1
Basal nucleusipsiBnc1
Accessory basal nucleusipsiAB1
Accessory basal nucleus magnocellular divisionipsiABm1
Accessory basal nucleus parvicellular divisionipsiABp2
Basal nucleus intermediate divisionipsiBnci0.5
Basal nucleus magnocellular partipsiBmc-3
Basal nucleus parvicellular partipsiBpc1
Basolateral amygdaloid nucleusipsiBL3
Lateral amygdaloid nucleusipsiLA3
Dorsolateral part of the lateral nucleusipsiLaDL1
Lateral nucleus medial partipsiLAM2.5
Ventrolateral part of the lateral nucleusipsiLaVL3
Ventromedial part of the lateral nucleusipsiLaVM-0.5
Bed nucleus of the stria terminalisipsiBST0
Bed nucleus of the stria terminalis intraamygdaloid division lateral partipsiBSTIAL-0.5
Central amygdaloid nucleusipsiCe3
Central amygdaloid nucleus caudal divisionipsiCeCD0.5
Central amygdaloid nucleus intermediate divisionipsiCeI-3
Central amygdaloid nucleus lateral divisionipsiCeL-3
Central amygdaloid nucleus lateral division capsular partipsiCeC-3
Central amygdaloid nucleus medial divisionipsiCeM0.5
Anterior amygdaloid areaipsiAA3
Anterior cortical amygdaloid nucleusipsiACo1
Anterior cortical amygdaloid nucleus lateral partipsiACoLa-0.5
Corticomedial amygdaloid nucleusipsiCMAn3
Posterior amygdaloid nucleusipsiCOAp3
Nucleus of the lateral olfactory tractipsiLOT1
Periamygdaloid complexipsiPAC3
Periamygdaloid complex medial divisionipsiPACm3
Periamygdaloid complex sulcal divisionipsiPACs2
Medial amygdaloid nucleusipsiMe1
Medial amygdaloid nucleus caudal partipsiMeC-3
Medial amygdaloid nucleus central dorsal partipsiMeCD2
Medial amygdaloid nucleus central ventral partipsiMeCV2
Medial amygdaloid nucleus rostral partipsiMeRo2
Amygdalohippocampal areaipsiAHi-3
Amygdalohippocampal area lateral partipsiAHilp1
Amygdalohippocampal area medial partipsiAHimp0.5
Bed nucleus of the accessory olfactory tractipsiBAOT1
Posteromedial cortical nucleusipsiPMCo3
Intercalated amygdaloid nucleus main partipsiIcaM-0.5
Intercalated nuclei of the amygdalaipsiI1
Medial globus pallidusipsiMGP3
Ventral pallidumipsiVP0
Accumbens nucleusipsiAc2
Anterior accumbensipsiAcbA2
Dorsomedial striatumipsiCPudm2
Dorsolateral striatum ventral partipsiCPudlV1
Ventral striatumipsiCPuv-3
Dentate gyrusipsiDG0
Field CA1 of hippocampusipsiCA11
Field CA1 of hippocampus temporal partipsiCA1t0.5
Portion of CA1 located adjacent to the ventral subiculumipsiCA1sv-0.5
Field CA2 of hippocampusipsiCA21
Field CA3 of hippocampusipsiCA3-2
SubiculumipsiS2
Subiculum caudal part middle one-third of the molecular layeripsiScapmotL-0.5
Subiculum dorsal part middle one-third of the molecular layeripsiSdapmotL-0.5
Subiculum temporal part superficial one-third of the plexiform layeripsiSTeLsotp-0.5
Parahippocampal regionipsiPHR0
PresubiculumipsiPrS0
ParasubiculumipsiPaS0
Entorhinal cortexipsiEnt3
Amygdaloentorhinal transitional field 6ipsiAE1
Dorsolateral entorhinal cortexipsiDLEnt0.5
Dorsal intermediate entorhinal cortexipsiDIEnt3
Lateral entorhinal cortexipsiLEnt-0.5
Lateral entorhinal cortex ventral partipsiVLEA-0.5
Medial entorhinal cortexipsiMEnt1
Caudal entorhinal field 1ipsiCEnt1-2
Ventral intermediate entorhinal cortexipsiVIEnt3
Ventrolateral entorhinal cortex deep part of layer 1ipsiVLENTdL1-0.5
Ventrolateral entorhinal cortex deep part of layer 2ipsiVLENTdL2-0.5
Ventromedial entorhinal cortex deep part of layer 1ipsiVMEAdL1-0.5
Ventromedial entorhinal cortex deep part of layer 2ipsiVMEAdL2-0.5
Piriform cortexipsiPir3
Infralimbic cortexipsiIL3
Infralimbic cortex layer 1ipsiILL13
Agranular insular cortex posterior partipsiAIP2
Agranular insular cortex ventral partipsiAIV3
Perirhinal cortexipsiA352
Ectorhinal cortexipsiA360.5
Postrhinal cortexipsiPOR0
Dorsal peduncular cortexipsiDP3
Olfacto septal areaipsiOSA1
Olfactory bulb A16ipsiMOB3
External plexiform layer of the olfactory bulbipsiOBepl3
Glomerular layer of the olfactory bulbipsiOBglo3
Deep granular cell layer of the olfactory bulbipsiOBgrad-0.5
Olfactory cortex layer 1bipsiONL1b3
Anterior olfactory nucleusipsiAON2
Olfactory tubercleipsiTuO3
Olfactory tubercle lateral partipsiTuOL-0.5
Olfactory tubercle medial partipsiTuOMP-0.5
Stria terminalisipsist0
Dorsal endopiriform nucleuscontraDEn3
Posterior amygdaloid nucleuscontraCOAp2.5
Periamygdaloid complexcontraPAC2.5
Medial amygdaloid nucleuscontraMe2.5
Dorsomedial striatumcontraCPudm1
Dorsolateral striatum ventral partcontraCPudlV0.5
Agranular insular cortex posterior partcontraAIP1
Agranular insular cortex ventral partcontraAIV1
Olfactory epitheliumipsiOLfEpi0

Input from

NameSideAbbr.WeightDetails
Dorsal raphe nucleusipsiDR2
Endopiriform systemipsiEnN0.5
Caudal endopiriform regionipsiCEn-0.5
Central endopiriform systemipsiCEnN-0.5
Dorsal endopiriform nucleusipsiDEn-0.5
Rostral endopiriform regionipsiREn-0.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB3
Preoptic regionipsiPREO2
HypothalamusipsiHYPO3
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area perifornical partipsiPFx2
Anterior hypothalamic areaipsiAHA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Ventromedial hypothalamic nucleusipsiVMH3
Arcuate nucleusipsiArc2
Interoanteromedial thalamic nucleusipsiIAM1
Rhomboid thalamic nucleusipsiRh1
Mediodorsal thalamic nucleusipsiMD1
Midline group of the dorsal thalamusipsiMTN-0.5
Paratenial thalamic nucleusipsiPT1
Reuniens thalamic nucleusipsiRe1
Basal nucleusipsiBnc1
Accessory basal nucleusipsiAB2
Accessory basal nucleus magnocellular divisionipsiABm2
Accessory basal nucleus parvicellular divisionipsiABp1
Basal nucleus intermediate divisionipsiBnci1
Basal nucleus magnocellular partipsiBmc1
Basal nucleus parvicellular partipsiBpc1
Lateral amygdaloid nucleusipsiLA2
Dorsolateral part of the lateral nucleusipsiLaDL2
Lateral nucleus medial partipsiLAM2
Ventrolateral part of the lateral nucleusipsiLaVL1
Central amygdaloid nucleusipsiCe0
Central amygdaloid nucleus intermediate divisionipsiCeI0
Central amygdaloid nucleus lateral divisionipsiCeL1
Central amygdaloid nucleus lateral division capsular partipsiCeC0
Central amygdaloid nucleus medial divisionipsiCeM0
Amygdalopiriform transition area lateral partipsiAPirLP1
Anterior amygdaloid areaipsiAA-3
Anterior cortical amygdaloid nucleusipsiACo1
Posterior amygdaloid nucleusipsiCOAp1
Nucleus of the lateral olfactory tractipsiLOT1
Periamygdaloid complexipsiPAC3
Periamygdaloid complex medial divisionipsiPACm1
Periamygdaloid complex sulcal divisionipsiPACs1
Medial amygdaloid nucleusipsiMe1
Medial amygdaloid nucleus caudal partipsiMeC3
Medial amygdaloid nucleus central dorsal partipsiMeCD1
Medial amygdaloid nucleus central ventral partipsiMeCV1
Medial amygdaloid nucleus rostral partipsiMeRo-3
Amygdalohippocampal areaipsiAHi1
Amygdalohippocampal area lateral partipsiAHilp1
Amygdalohippocampal area medial partipsiAHimp0
Bed nucleus of the accessory olfactory tractipsiBAOT-3
Intercalated nuclei of the amygdalaipsiI-3
Medial globus pallidusipsiMGP3
Ventral pallidumipsiVP1
Field CA1 of hippocampusipsiCA12
Field CA1 of hippocampus temporal partipsiCA1t1.5
SubiculumipsiS2
Subiculum ventral part medial partipsiSvm2
Parietal rhinal cortexipsiPaRH2
Entorhinal cortexipsiEnt2
Dorsolateral entorhinal cortex layersipsiDLEntL-0.5
Lateral entorhinal cortexipsiLEnt2.5
Lateral entorhinal cortex ventrolateral partipsiLEntVL3
Piriform cortexipsiPir2
Anterior piriform cortexipsiAPIRC-0.5
Anterior piriform cortex ventrolateral partipsiAPIRCvL-0.5
Posterior piriform cortexipsiPPIRC-0.5
Prelimbic cortexipsiPrL2
Infralimbic cortexipsiIL3
Parietal cortex ventral areaipsiParV2
Parietal cortex ventral area caudal partipsiParVC1
Temporal association area 2ipsiTe21.5
Agranular insular cortexipsiAI2
Agranular insular cortex posterior partipsiAIP3
Agranular insular cortex posterior part dorsal partipsiAIPpd2.5
Agranular insular cortex ventral partipsiAIV3
Dysgranular insular cortexipsiDI0.5
Dysgranular insular cortex layer 5ipsiDIL5-0.5
Gustatory dysgranular insular cortexipsiDIg2
Visceral dysgranular insular cortexipsiDIv1.5
Perirhinal cortex dorsal portionipsiPRhd3
Perirhinal cortex ventral portionipsiPRhv3
Ectorhinal cortexipsiA362
Dorsal peduncular cortexipsiDP2.5
Lateral orbital cortexipsiLO2.5
Medial orbital cortexipsiMO2.5
Olfactory bulb A16ipsiMOB2
Anterior olfactory nucleusipsiAON0
HypothalamuscontraHYPO-0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Basal nucleus intermediate divisioncontraBnci1
Periamygdaloid complexcontraPAC2.5
Anterior piriform cortexcontraAPIRC-0.5
Infralimbic cortexcontraIL0.5
Anterior olfactory nucleus central partcontraAONc-0.5
Anterior olfactory nucleus rostral partcontraAONr3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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