University of Rostock

Department of Anatomy

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Rat connectome



Anterior medial frontal cortex left


Abbreviation
AMFC
Color       
Superior regionsOrbitofrontal cortex

SynonymsAbbr.Language
Anterior medial frontal cortexAMFCEng
Orbitofrontal cortexOFCEng
Mid-anterior orbital cortexOrCmaEng
Orbitofrontal cortexOFCEng

SubregionsSide
Orbital cortexleft

Output to

NameSideAbbr.WeightDetails
Ventral tegmental area A10ipsiVTA3
Dorsal raphe nucleusipsiDR3
Basal forebrainipsiBAF-0.5
Mediodorsal thalamic nucleusipsiMD1
Mediodorsal thalamic nucleus caudal partipsiMDCa2
Mediodorsal thalamic nucleus central partipsiMDC2
Mediodorsal thalamic nucleus lateral partipsiMDL2
Mediodorsal thalamic nucleus medial partipsiMDM2
Midline group of the dorsal thalamusipsiMTN1
HabenulaipsiHAB1
Basolateral amygdaloid nucleusipsiBL2
Piriform cortexipsiPir1
Ventral tegmental area A10contraVTA1
Dorsal raphe nucleuscontraDR2
Mediodorsal thalamic nucleuscontraMD2
Mediodorsal thalamic nucleus caudal partcontraMDCa1
Mediodorsal thalamic nucleus central partcontraMDC1
Mediodorsal thalamic nucleus lateral partcontraMDL1
Mediodorsal thalamic nucleus medial partcontraMDM1
HabenulacontraHAB0

Input from

NameSideAbbr.WeightDetails
Ventral periaqueductal grayipsiVPAG2
Substantia nigra reticular partipsiSNR-0.5
Ventral tegmental area A10ipsiVTA3
Ventral tegmental area A10 caudal partipsiVTAcp2.5
Ventral tegmental area A10 medial partipsiVTAM3
Ventral tegmental area rostral partipsiVTAR4
Caudal linear nucleus of the rapheipsiCLi1
Ventral tegmental nucleus central partipsiVTgC4
Dorsal tegmental nucleus lateral partipsiDLTN-0.5
Locus coeruleusipsiLC1.5
Locus coeruleus caudal partipsiLCca0
Locus coeruleus coreipsiLCco1.5
Locus coeruleus rostral partipsiLCRo1
Preparasubthalamic nucleusipsiPST1
Mesencephalic reticular formationipsiMRF1
Pontine reticular nucleus oral partipsiPnO1
Parabrachial nucleus posterior partipsiPBp1
Dorsal raphe nucleusipsiDR2.5
Dorsal raphe nucleus caudal partipsiDRC0
Dorsal raphe nucleus central partipsiDRcep2.5
Central part of the dorsomedial zone of the dorsal raphe nucleusipsiDRdmCe2.5
Dorsal raphe nucleus medial partipsiDRNM2
Dorsal raphe nucleus rostral partipsiDRr3
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Basal nucleus MeynertipsiB-0.5
Basal nucleus Meynert anterior partipsiBan1.5
Basal nucleus Meynert caudal endipsiBcaE0
Basal nucleus Meynert intermediate divisonipsiBim1
Basal nucleus Meynert posterior divisionipsiBpd1
Central zone of the nucleus basalisipsiBcez1
Substantia innominataipsiSI-0.5
Tenia tectaipsiTT-0.5
Lateral hypothalamic area perifornical partipsiPFx0
Supramammillar nucleusipsiSuM1
ThalamusipsiT-0.5
Central medial thalamic nucleusipsiCM1
Mediodorsal thalamic nucleusipsiMD1
Mediodorsal thalamic nucleus central partipsiMDC1
Submedius thalamic nucleusipsiSub3
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleusipsiPV1
Paraventricular thalamic nucleus posterior partipsiPVP1
Reuniens thalamic nucleusipsiRe3
Parafascicular nucleusipsiPFa0.5
Parafascicular nucleus posterior partipsiPFaP0.5
Parafascicular nucleus ventral partipsiPFaV0.5
Basal nucleusipsiBnc1
Basal nucleus rostral partipsiBncR1
ClaustrumipsiCl1
Globus pallidusipsiGP-0.5
Ventral pallidumipsiVP-0.5
Accumbens nucleusipsiAc-0.5
Parasubthalamic nucleusipsiPSTh1
HippocampusipsiHIPP-0.5
Entorhinal cortex rostral poleipsiEntRoP-0.5
Mid-rostral level of dorsolateral entorhinal cortex layer 4ipsiDLEntMrL4-0.5
Mid-rostral level of dorsolateral entorhinal cortex layer 5ipsiDLEntMrL5-0.5
Mid-rostral level of dorsolateral entorhinal cortex layer 6ipsiDLEntMrL6-0.5
Piriform cortexipsiPir3
Anterior cingulate cortexipsiACC-0.5
Prelimbic cortexipsiPrL-1
Prelimbic cortex rostral partipsiPrLr-0.5
Infralimbic cortexipsiIL-1
Frontal cortex area 2ipsiFr2-0.5
Primary auditory cortex rostral partipsiAu1R-0.5
Agranular insular cortex dorsal partipsiAID2
Dysgranular insular cortexipsiDI1
Visceral dysgranular insular cortexipsiDIv2
Granular insular cortexipsiGI1
Primary somatosensory cortex ventral partipsiS1V-0.5
Dorsolateral orbital cortexipsiDLO-0.5
Lateral orbital cortexipsiLO-0.5
Medial orbital cortexipsiMO-0.5
Ventrolateral orbital areaipsiVLO-0.5
Ventrolateral septal regionipsiVLSER-0.5
Ventral tegmental area A10contraVTA-0.5
Dorsal tegmental nucleus lateral partcontraDLTN-0.5
Locus coeruleuscontraLC-0.5
Basal nucleus MeynertcontraB-0.5
ThalamuscontraT-0.5
Mediodorsal thalamic nucleuscontraMD0
HippocampuscontraHIPP-0.5
Piriform cortexcontraPir-0.5
Anterior cingulate cortexcontraACC1
Rostrocaudal extent of the cingulate cortexcontraCgRC-0.5
Prelimbic cortexcontraPrL0.5
Infralimbic cortexcontraIL0.5
Frontal cortex area 2contraFr21
Perirhinal cortexcontraA35-0.5
Rostral somatomotoric regionscontraSMRr1
Lateral orbital cortexcontraLO-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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