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Rat connectome



Spleen right


Abbreviation
OrgSPL
Color       
Superior regionsImmune system

SynonymsAbbr.Language
SpleenOrgSPLEng

SubregionsSide
Hilus of the spleenright

Output to

NameSideAbbr.WeightDetails
Dorsal root ganglion T7ipsiDRGT7-0.5
Dorsal root ganglion T8ipsiDRGT8-0.5
Paravertebral sympathetic gangliaipsiAutoPaGTSym-0.5
Celiac ganglionipsiAutoCel-0.5

Input from

NameSideAbbr.WeightDetails
Interstitial nucleus of medial longitudinal fasciculuscontraIMLF-0.5
Lateral periaqueductal graycontraLPAG-0.5
Periaqueductal gray rostral partcontraPAGR-0.5
Ventrolateral periaqueductal graycontraVLPAG-0.5
Laterodorsal tegmental nucleuscontraLDTg-0.5
Pedunculopontine tegmental nucleuscontraPPTg-0.5
Edinger Westphal nucleuscontraEW-0.5
A5 noradrenaline cellscontraA5-0.5
A7 noradrenaline cellscontraA7-0.5
Barringtons nucleuscontraBar-0.5
Ventral part of the midrostral Barringtons nucleuscontraVMirBar-0.5
Locus coeruleuscontraLC-0.5
Deep mesencephalic nucleuscontraDpMe-0.5
Pontine reticular nucleus ventral partcontraPnV-0.5
Pontine reticular nucleus caudal partcontraPNC-0.5
Gigantocellular reticular nucleuscontraGi-0.5
Gigantocellular reticular nucleus alpha partcontraGiA-0.5
Gigantocellular reticular nucleus ventral partcontraGiV-0.5
Medullary reticular nucleus ventral partcontraMdV-0.5
Subcoeruleus nucleus dorsal partcontraSubCD-0.5
Subcoeruleus nucleus ventral partcontraSubCV-0.5
C3 adrenaline cellscontraC3-0.5
Area postremacontraAP-0.5
Perifacial zonecontraP7-0.5
Nucleus of the solitary tract dorsomedial partcontraSolDM-0.5
Nucleus of the solitary tract intermediate partcontraSolIM-0.5
Nucleus of the solitary tract medial partcontraSolM-0.5
Nucleus of the solitary tract ventrolateral partcontraSolVL-0.5
Dorsal motor nucleus of vaguscontra100
Raphe magnus nucleuscontraRMg-0.5
Raphe obscurus nucleuscontraROb-0.5
Raphe pallidus nucleuscontraRPa-0.5
Caudal ventrolateral medullacontraCVLM-0.5
Rostral ventrolateral medullacontraRVLM-0.5
Rostral ventrolateral medulla rostral partcontraRVLMr-0.5
Caudal interstitial nucleus of the medial longitudinal fasciculuscontraCI-0.5
Dorsal paragigantocellular nucleuscontraDPGi-0.5
Lateral paragigantocellular nucleuscontraLPGi-0.5
Lateral hypothalamic areacontraLH-0.5
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]contraDMrhc-0.5
Dorsal hypothalamic nucleuscontraDo-0.5
Posterior hypothalamic areacontraPHA-0.5
Area periventricularis hypothalamica communis [Regio hypothalamus medius]contraPeRHM-0.5
Paraventricular hypothalamic nucleus ventromedial parvicellular partcontraVmPaPAR-0.5
Paraventricular hypothalamic nucleus lateral parvocellular partcontraLPPa-0.5
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]contraPaPo-0.5
Anterior paraventricular nucleuscontraAPaPAR-0.5
Paraventricular hypothalamic nucleus dorsal parvocellular divisioncontraPavPoD-0.5
Perifornical nucleuscontraPeF-0.5
Retrochiasmatic areacontraRCh-0.5
Intercalated nucleus T1contraICLT11
Intermediolateral cell column T1contraIMLT13
Intercalated nucleus T2contraIClT22
Intermediolateral cell column T2contraIMLT23
Intercalated nucleus T3contraIClT32
Intermediolateral cell column T3contraIMLT33
Intercalated nucleus T4contraIClT44
Intermediolateral cell column T4contraIMLT43
Intercalated nucleus T5contraIClT53
Intermediolateral cell column T5contraIMLT53
Intercalated nucleus T6contraIClT63
Intermediolateral cell column T6contraIMLT63
Intercalated nucleus T7contraIClT73
Intermediolateral cell column T7contraIMLT73
Intercalated nucleus T8contraIClT84
Intermediolateral cell column T8contraIMLT83
Intercalated nucleus T9contraIClT93
Intermediolateral cell column T9contraIMLT93
Intercalated nucleus T10contraIClT103
Intermediolateral cell column T10contraIMLT103
Intercalated nucleus T11contraIClT111
Intermediolateral cell column T11contraIMLT113
Intercalated nucleus T12contraIClT121
Intermediolateral cell column T12contraIMLT123
Intercalated nucleus T13contraIClT130.5
Intermediolateral cell column T13contraIMLT133
Interstitial nucleus of medial longitudinal fasciculusipsiIMLF1
Lateral periaqueductal grayipsiLPAG1
Periaqueductal gray rostral partipsiPAGR1
Ventrolateral periaqueductal grayipsiVLPAG2
Laterodorsal tegmental nucleusipsiLDTg1
Pedunculopontine tegmental nucleusipsiPPTg1
Edinger Westphal nucleusipsiEW2
A5 noradrenaline cellsipsiA54
A7 noradrenaline cellsipsiA73
Barringtons nucleusipsiBar3
Ventral part of the midrostral Barringtons nucleusipsiVMirBar-0.5
Locus coeruleusipsiLC3
Deep mesencephalic nucleusipsiDpMe1
Pontine reticular nucleus ventral partipsiPnV2
Pontine reticular nucleus caudal partipsiPNC2
Gigantocellular reticular nucleusipsiGi4
Gigantocellular reticular nucleus alpha partipsiGiA4
Gigantocellular reticular nucleus ventral partipsiGiV2
Medullary reticular nucleusipsiMdD-10
Medullary reticular nucleus ventral partipsiMdV1
Ventral medullary reticular formationipsiVMurF-0.5
Subcoeruleus nucleus dorsal partipsiSubCD3
Subcoeruleus nucleus ventral partipsiSubCV3
C3 adrenaline cellsipsiC32
Ambiguus nucleusipsiAmb-0.5
Area postremaipsiAP1
Perifacial zoneipsiP73
Nucleus of the solitary tract dorsomedial partipsiSolDM1
Nucleus of the solitary tract intermediate partipsiSolIM1
Nucleus of the solitary tract medial partipsiSolM2
Nucleus of the solitary tract ventrolateral partipsiSolVL1
Dorsal motor nucleus of vagusipsi10-0.5
Caudal raphe nucleiipsiRANc-0.5
Raphe magnus nucleusipsiRMg3
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa3
Caudal ventrolateral medullaipsiCVLM2
Rostral ventrolateral medullaipsiRVLM3
Rostral ventrolateral medulla rostral partipsiRVLMr4
Caudal interstitial nucleus of the medial longitudinal fasciculusipsiCI1
Dorsal paragigantocellular nucleusipsiDPGi1
Lateral paragigantocellular nucleusipsiLPGi4
Ventromedial medulla oblongataipsiMeObvm-10
Lateral preoptic areaipsiLPO1
Lateral hypothalamic areaipsiLH3
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]ipsiDMrhc2
Dorsal hypothalamic nucleusipsiDo1
Posterior hypothalamic areaipsiPHA1
Area periventricularis hypothalamica communis [Regio hypothalamus medius]ipsiPeRHM1
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo2
Anterior paraventricular nucleusipsiAPaPAR2
Paraventricular hypothalamic nucleus ventromedial parvicellular partipsiVmPaPAR3
Paraventricular hypothalamic nucleus lateral parvocellular partipsiLPPa3
Paraventricular hypothalamic nucleus dorsal parvocellular divisionipsiPavPoD4
Paraventricular nucleus medial parvicellular part dorsal zoneipsiPVHmpdo-0.5
Perifornical nucleusipsiPeF2
Retrochiasmatic areaipsiRCh1
Bed nucleus of the stria terminalisipsiBST1
Ventral gray of spinal cordipsiVGMES1
Dorsal aspects of the gray matteripsiDGMES1
Ventral horn C8ipsiVHC8-0.5
Intercalated nucleus T1ipsiICLT11
Intermediolateral cell column T1ipsiIMLT13
Ventral horn T1ipsiVHT1-0.5
Intercalated nucleus T2ipsiIClT22
Intermediolateral cell column T2ipsiIMLT23
Ventral horn T2ipsiVHT2-0.5
Intercalated nucleus T3ipsiIClT32
Intermediolateral cell column T3ipsiIMLT33
Ventral horn T3ipsiVHT3-0.5
Intercalated nucleus T4ipsiIClT44
Intermediolateral cell column T4ipsiIMLT44
Ventral horn T4ipsiVHT4-0.5
Intercalated nucleus T5ipsiIClT53
Intermediolateral cell column T5ipsiIMLT53
Ventral horn T5ipsiVHT5-0.5
Intercalated nucleus T6ipsiIClT63
Intermediolateral cell column T6ipsiIMLT63
Ventral horn T6ipsiVHT6-0.5
Intercalated nucleus T7ipsiIClT73
Intermediolateral cell column T7ipsiIMLT73
Ventral horn T7ipsiVHT7-0.5
Intercalated nucleus T8ipsiIClT84
Intermediolateral cell column T8ipsiIMLT84
Ventral horn T8ipsiVHT8-0.5
Intercalated nucleus T9ipsiIClT93
Intermediolateral cell column T9ipsiIMLT93
Ventral horn T9ipsiVHT9-0.5
Intercalated nucleus T10ipsiIClT103
Intermediolateral cell column T10ipsiIMLT103
Ventral horn T10ipsiVHT10-0.5
Intercalated nucleus T11ipsiIClT111
Intermediolateral cell column T11ipsiIMLT113
Ventral horn T11ipsiVHT11-0.5
Intercalated nucleus T12ipsiIClT121
Intermediolateral cell column T12ipsiIMLT123
Ventral horn T12ipsiVHT12-0.5
Intercalated nucleus T13ipsiIClT130.5
Intermediolateral cell column T13ipsiIMLT133
Ventral horn T13ipsiVHT13-0.5
Ventral horn L1ipsiVHL1-0.5
Ventral horn L2ipsiVHL2-0.5
Ventral horn L3ipsiVHL3-0.5
Celiac ganglioncontraAutoCel0
Superior mesenteric ganglioncontraAutoSmes0
Suprarenal ganglioncontraAutoSupra-0.5
Paravertebral sympathetic gangliaipsiAutoPaGTSym1
Suprarenal ganglionipsiAutoSupra-0.5
Splanchnic gangliaipsiAutoSPLAG1
Inter-renal ganglionipsiAutoParGIR0.5
Celiac ganglionipsiAutoCel3
Superior mesenteric ganglionipsiAutoSmes2
Nodose ganglionipsiAutoNoG-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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