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Rat connectome



Tuberomammillary nucleus dorsomedial part left


Abbreviation
TBMdm
Color       
Superior regionsTuberomammillary nucleus

SynonymsAbbr.Language
Tuberomammillary nucleus dorsomedial partTBMdm 
Dorsomedial tuberomammillary nucleus  

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG-0.5
Substantia nigra compact part dorsal tieripsiSNCD2
Substantia nigra compact part dorsal tier intermediate subdivisionipsiSNCDi1
Substantia nigra compact part dorsal tier lateral subsivisionipsiSNCDl1
Substantia nigra compact part dorsal tier medial divisionipsiSNCDm2
Substantia nigra compact part medial tieripsiSNCM2
Substantia nigra compact part ventral tieripsiSNCV2
Laterodorsal tegmental nucleusipsiLDTg3
Pedunculopontine tegmental nucleusipsiPPTg1
Cerebellar cortexipsiCERC1
Anterior lobeipsiAnL1
Locus coeruleus caudal partipsiLCca0.5
Locus coeruleus pars principalisipsiLCpp0.5
Locus coeruleus rostral partipsiLCRo0.5
Dorsal raphe nucleus caudal partipsiDRC0.5
Dorsal raphe nucleus middle lateral wingipsiDRmlw0.5
Dorsal raphe nucleus middle midline partipsiDRmmip0.5
Dorsal raphe nucleus rostral partipsiDRr3
Dorsal raphe nucleus middle partipsiDRami0.5
Diagonal band of BrocaipsiDBB1
Medial septal nucleusipsiMS1
Pineal glandipsiPi3
Amygdaloid complexipsiAC1
Caudate putamenipsiCPu1
Dorsal hippocampusipsiHIPPd1
Lateral entorhinal cortexipsiLEnt1
Medial entorhinal cortexipsiMEnt1
Prelimbic cortexipsiPrL1
Frontal cortex area 2 lateral partipsiFr2L1
Frontal cortex area 2 medial partipsiFr2M1
Perirhinal cortexipsiA351
Primary somatosensory cortexipsiS11
Secondary somatosensory cortexipsiS21
Olfactory bulb A16ipsiMOB1
Olfactory tubercleipsiTuO1
Substantia nigra compact part dorsal tiercontraSNCD1
Substantia nigra compact part dorsal tier intermediate subdivisioncontraSNCDi1
Substantia nigra compact part dorsal tier lateral subsivisioncontraSNCDl1
Substantia nigra compact part dorsal tier medial divisioncontraSNCDm1
Substantia nigra compact part medial tiercontraSNCM1
Substantia nigra compact part ventral tiercontraSNCV1
Laterodorsal tegmental nucleuscontraLDTg2
Pedunculopontine tegmental nucleuscontraPPTg1
Cerebellar cortexcontraCERC1
Locus coeruleus caudal partcontraLCca0.5
Locus coeruleus rostral partcontraLCRo0.5
Locus coeruleus pars principaliscontraLCpp0.5
Dorsal raphe nucleus middle lateral wingcontraDRmlw0.5
Amygdaloid complexcontraAC1
Dorsal hippocampuscontraHIPPd1
Lateral entorhinal cortexcontraLEnt1
Medial entorhinal cortexcontraMEnt1
Perirhinal cortexcontraA351
Primary somatosensory cortexcontraS11
Secondary somatosensory cortexcontraS21
Olfactory bulb A16contraMOB1
Olfactory tuberclecontraTuO1

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
Periaqueductal gray pars alphaipsiPAGa-0.5
Substantia nigra A9ipsiSN1
Ventral tegmental area A10ipsiVTA1
Peripeduncular areaipsiPPA2
Tegmental nuclei of GuddenipsiTGAG-0.5
A5 noradrenaline cellsipsiA50
A7 noradrenaline cellsipsiA70
Locus coeruleusipsiLC0.5
Midline of caudal ponsipsiPcami2
Cluster lateral and ventral to the lateral edge of the superior cerebellar peduncleipsiMRFcLV2
Pontine reticular nucleusipsiPRN1
Lateral parabrachial nucleusipsiLPB-0.5
C1 adrenaline cellsipsiC1-0.5
C2 adrenaline cellsipsiC2-0.5
C3 adrenaline cellsipsiC31
Mesencephalic trigeminal nucleusipsiMe52
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR3
Median raphe nucleusipsiMnR-0.5
Pontine raphe nucleusipsiPnR1
Raphe magnus nucleusipsiRMg2
B7 cell groupipsiB7CG-0.5
A1 noradrenergic cellsipsiA1-0.5
A1 noradrenergic cells rostral partipsiA1R-0.5
A2 noradrenergic cellsipsiA2-0.5
Dorsal part of the myelencephalonipsiMYCD-0.5
Ventral myelencephalonipsiMYCV1
A8 dopamine cells retrorubral groupipsiRRF0
Substantia nigra A9contraSN-0.5
Peripeduncular areacontraPPA-0.5
Pontine reticular nucleuscontraPRN-0.5
C2 adrenaline cellscontraC2-0.5
Dorsal raphe nucleuscontraDR0.5
A2 noradrenergic cellscontraA2-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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