University of Rostock

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Rat connectome



Supramammillar nucleus medial part left


Abbreviation
SuMM
Color       
Superior regionsSupramammillar nucleus

SynonymsAbbr.Language
Supramammillar nucleus medial partSuMMEng
Nucleus supramammillaris pars medialis Lat
Supramammillary nucleus medial part Eng
Supramammillar nucleus medial partSUMmEng

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG2
Ventral periaqueductal grayipsiVPAG0
Periventricular gray matteripsiPVG0
Central tegmental fieldipsiTGAC0
Substantia nigra A9ipsiSN0
Ventral tegmental area A10ipsiVTA0
Retrorubral nucleusipsiRR0
Dorsal tegmental nucleusipsiDTg2
Pedunculopontine tegmental nucleusipsiPPTg0
Dorsal raphe nucleusipsiDR1
Median raphe nucleusipsiMnR1
Central raphe nucleusipsiCRN0
Pontine raphe nucleusipsiPnR0
Raphe magnus nucleusipsiRMg0
Endopiriform systemipsiEnN1
Diagonal band of BrocaipsiDBB1
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB2
Medial septal nucleusipsiMS2
Border area of the medial septal nucleusipsiBaMS-0.5
Medial part of the dorsolateral medial septal nucleusipsiMDLMS-0.5
Substantia innominataipsiSI2
Lateral preoptic areaipsiLPO2
Medial preoptic areaipsiMPA3
Magnocellular preoptic nucleusipsiMCPO0
Medial preoptic nucleusipsiMPO0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0.5
Lateral hypothalamic area juxtadorsomedial regionipsiJDM1
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0.5
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0
Lateral hypothalamic area [Lateral zone tuberal level]ipsiLHtu0.5
Medial division of the hypothalamusipsiMdH0.5
Anterior hypothalamic nucleusipsiAHn2
Dorsal hypothalamic areaipsiDA3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Posterior hypothalamic areaipsiPHA2
Ventromedial hypothalamic nucleusipsiVMH0
Anteroventral periventricular nucleus 2ipsiAVPV21.5
Paraventricular hypothalamic nucleus lateral partipsiPaLa2
Paraventricular hypothalamic nucleusipsiPa1
Paraventricular nucleus medial partipsiPame2
Subparaventricular zone of the hypothalamusipsiSPa-0.5
Suprachiasmatic nucleusipsiSCh2
Intermediate nucleusipsiInM3
Lateral mammillary nucleusipsiLM1
Mammillothalamic tractipsimt3
Anterodorsal thalamic nucleusipsiAD1
Anteromedial thalamic nucleusipsiAM1
Anteroventral thalamic nucleusipsiAV1
Interoanteromedial thalamic nucleusipsiIAM1
Central medial thalamic nucleusipsiCM2
Centrolateral thalamic nucleusipsiCL2
Paracentral thalamic nucleusipsiPC1
Parafascicular thalamic nucleusipsiPF1
Rhomboid thalamic nucleusipsiRh1
Mediodorsal thalamic nucleusipsiMD1
Intermediodorsal thalamic nucleusipsiIMD2
Reuniens thalamic nucleusipsiRe3
Ventrolateral thalamic nucleusipsiVL0
Ventrobasal complexipsiVB0
Laterodorsal thalamic nucleusipsiLD0
Reticular thalamic nucleusipsiRt0
Zona incertaipsiZI2
Nucleus of the fields of ForelipsiF3
Lateral habenular nucleusipsiLHb0
Medial habenular nucleusipsiMHb0
Amygdaloid complexipsiAC1
Lateral amygdaloid nucleusipsiLA2
Bed nucleus of the stria terminalisipsiBST2
ClaustrumipsiCl1
Globus pallidusipsiGP0
Ventral pallidumipsiVP0
Accumbens nucleusipsiAc0
Caudate putamenipsiCPu0
Dorsal hippocampusipsiHIPPd3
Dentate gyrusipsiDG2
Dorsal hippocampus dentate gyrusipsiDDG0
Ventral hippocampus dentate gyrusipsiVDG1
Ventral dentate gyrus inner molecular layeripsiVDGL7sim-0.5
Dorsal blade of the dentate gyrus granular cell layeripsiDbDGgr0
Dorsal blade of the dentate gyrus inner molecular layeripsiDbDGim0
Ammon hornipsiAmH1
Field CA2 of hippocampus layer stratum pyramidaleipsiCA2pyr-0.5
Field CA3a of hippocampus pyramidal cell layeripsiCA3aLpy-0.5
SubiculumipsiS0
Septohippocampal nucleusipsiSHi2
Ventral hippocampusipsiHIPPv3
Entorhinal cortexipsiEnt0
Lateral entorhinal cortexipsiLEnt1
Piriform cortexipsiPir1
Retrosplenial regionsipsiRS0
Cingulate cortexipsiCg0
Infralimbic cortexipsiIL0
Frontal association cortexipsiFrA1
Parietal association cortexipsiPtA0
Temporal cortexipsiTE0
Insular cortexipsiICX0
Perirhinal cortexipsiA351
Ectorhinal cortexipsiA361
Visual regionsipsiVR0
Orbital cortexipsiOrC0
Interpeduncular nucleusipsiIP0
Interpeduncular nucleus rostral subnucleus central partipsiIPRce3
Olfactory tubercleipsiTuO0
Lateral septal nucleus dorsal partipsiLSD3
Lateral septal nucleus ventral partipsiLSV3
Triangular septal nucleusipsiTS1
Septohypothalamic nucleusipsiSHy3
Intermediolateral septal areaipsiSERimL-0.5
Thoracal segmentsipsiTSeg0
Border area of the medial septal nucleuscontraBaMS-0.5
Medial part of the dorsolateral medial septal nucleuscontraMDLMS-0.5
Medial preoptic nucleuscontraMPO0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Anteroventral periventricular nucleus 2contraAVPV20.5
Paraventricular hypothalamic nucleuscontraPa3
Intermediolateral septal areacontraSERimL-0.5

Input from

NameSideAbbr.WeightDetails
Central gray alpha partipsiCGA1
Ventral periaqueductal grayipsiVPAG1
Periventricular gray matteripsiPVG0
Laterodorsal tegmental nucleusipsiLDTg0
Ventral tegmental nucleusipsiVTg0.5
Dorsal tegmental nucleusipsiDTg1
Dorsal raphe nucleusipsiDR0
Dorsal raphe nucleus caudal partipsiDRC1
Median raphe nucleusipsiMnR1
Pontine raphe nucleusipsiPnR0
Raphe magnus nucleusipsiRMg1
Dorsomedial hypothalamic nucleusipsiDMHy-2
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0.5
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area juxtadorsomedial regionipsiJDM2
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0.5
Anterior hypothalamic area central partipsiAHAC1
Anterior hypothalamic area posterior partipsiAHAP-0.5
Anterior hypothalamic nucleusipsiAHn2
Anterior part of the anterior hypothalamic nucleusipsiAHna1
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1
Perifornical nucleus medial partipsiPeFM-0.5
Retrochiasmatic area lateral partipsiRChL1
Anterior basomedial nucleusipsiBMA1
Posterior basomedial nucleusipsiBMP1
Bed nucleus of the stria terminalis fusiform partipsiFu1
Intermediate subiculum ventral partipsiSivp1
Subiculum ventral partipsiSv1
Subiculum ventral part caudal subdivisionipsiSvc2
Midmediolateral caudal part of the ventral subiculumipsiSvcMM0.5
Ventral subiculum rostromedial partipsiSvrm2
Lateral septal nucleus ventral partipsiLSV1
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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